RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 GRIN2BQ13224 1484 aa28.93■■■□□ 2.22
SEMA3D-202ENST00000444867 ADAMTS12P58397 1594 aa28.92■■■□□ 2.22
SEMA3D-202ENST00000444867 FHAD1B1AJZ9 1412 aa28.92■■■□□ 2.22
SEMA3D-202ENST00000444867 ZEB1P37275 1124 aaPredicted RBP28.91■■■□□ 2.22
SEMA3D-202ENST00000444867 AQRO60306 1485 aaKnown RBP eCLIP28.89■■■□□ 2.22
SEMA3D-202ENST00000444867 MAP3K1Q13233 1512 aa28.89■■■□□ 2.22
SEMA3D-202ENST00000444867 ZNF608Q9ULD9 1512 aaPredicted RBP28.82■■■□□ 2.2
SEMA3D-202ENST00000444867 SAMD9Q5K651 1589 aa28.82■■■□□ 2.2
SEMA3D-202ENST00000444867 EIF4G3O43432 1585 aaKnown RBP28.8■■■□□ 2.2
SEMA3D-202ENST00000444867 TIAM1Q13009 1591 aa28.78■■■□□ 2.2
SEMA3D-202ENST00000444867 PCF11O94913 1555 aaKnown RBP28.75■■■□□ 2.19
SEMA3D-202ENST00000444867 CFAP43Q8NDM7 1665 aa28.75■■■□□ 2.19
SEMA3D-202ENST00000444867 FYCO1Q9BQS8 1478 aa28.73■■■□□ 2.19
SEMA3D-202ENST00000444867 FHOD3Q2V2M9 1422 aa28.73■■■□□ 2.19
SEMA3D-202ENST00000444867 FMN1Q68DA7 1419 aa28.71■■■□□ 2.19
SEMA3D-202ENST00000444867 KANK4Q5T7N3 995 aaPredicted RBP28.69■■■□□ 2.18
SEMA3D-202ENST00000444867 CASKIN1Q8WXD9 1431 aa28.68■■■□□ 2.18
SEMA3D-202ENST00000444867 IQGAP2Q13576 1575 aa28.68■■■□□ 2.18
SEMA3D-202ENST00000444867 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
SEMA3D-202ENST00000444867 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
SEMA3D-202ENST00000444867 P3H3Q8IVL6 736 aa28.64■■■□□ 2.18
SEMA3D-202ENST00000444867 LRRC9Q6ZRR7 1453 aa28.61■■■□□ 2.17
SEMA3D-202ENST00000444867 RRBP1Q9P2E9 1410 aaKnown RBP28.61■■■□□ 2.17
SEMA3D-202ENST00000444867 GRIN2AQ12879 1464 aa28.58■■■□□ 2.17
SEMA3D-202ENST00000444867 UGGT2Q9NYU1 1516 aa28.56■■■□□ 2.16
SEMA3D-202ENST00000444867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.54■■■□□ 2.16
SEMA3D-202ENST00000444867 KIAA0586Q9BVV6 1533 aa28.54■■■□□ 2.16
SEMA3D-202ENST00000444867 CCER1Q8TC90 406 aaPredicted RBP28.53■■■□□ 2.16
SEMA3D-202ENST00000444867 SYNJ2O15056 1496 aa28.53■■■□□ 2.16
SEMA3D-202ENST00000444867 HNRNPUL2Q1KMD3 747 aaKnown RBP28.47■■■□□ 2.15
SEMA3D-202ENST00000444867 CCNB3Q8WWL7 1395 aa28.45■■■□□ 2.15
SEMA3D-202ENST00000444867 LRRIQ1Q96JM4 1722 aa28.44■■■□□ 2.14
SEMA3D-202ENST00000444867 ATP1B4Q9UN42 357 aaPredicted RBP28.41■■■□□ 2.14
SEMA3D-202ENST00000444867 HECW1Q76N89 1606 aa28.4■■■□□ 2.14
SEMA3D-202ENST00000444867 KIAA0556O60303 1618 aa28.39■■■□□ 2.14
SEMA3D-202ENST00000444867 CEP170Q5SW79 1584 aa28.39■■■□□ 2.13
SEMA3D-202ENST00000444867 CHMP7Q8WUX9 453 aaPredicted RBP28.38■■■□□ 2.13
SEMA3D-202ENST00000444867 CCDC18Q5T9S5 1454 aa28.38■■■□□ 2.13
SEMA3D-202ENST00000444867 NUP160Q12769 1436 aa28.35■■■□□ 2.13
SEMA3D-202ENST00000444867 DISP1Q96F81 1524 aa28.34■■■□□ 2.13
SEMA3D-202ENST00000444867 PHLDB1Q86UU1 1377 aa28.32■■■□□ 2.12
SEMA3D-202ENST00000444867 EHBP1L1Q8N3D4 1523 aa28.31■■■□□ 2.12
SEMA3D-202ENST00000444867 MTUS2Q5JR59 1369 aa28.28■■■□□ 2.12
SEMA3D-202ENST00000444867 SUPT6HQ7KZ85 1726 aaKnown RBP28.26■■■□□ 2.11
SEMA3D-202ENST00000444867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.25■■■□□ 2.11
SEMA3D-202ENST00000444867 EPRSP07814 1512 aaKnown RBP28.22■■■□□ 2.11
SEMA3D-202ENST00000444867 FBLN2P98095 1184 aa28.19■■■□□ 2.1
SEMA3D-202ENST00000444867 RAPGEF6Q8TEU7 1601 aa28.18■■■□□ 2.1
SEMA3D-202ENST00000444867 CARMIL2Q6F5E8 1435 aa28.17■■■□□ 2.1
SEMA3D-202ENST00000444867 NCOA2Q15596 1464 aa28.16■■■□□ 2.1
SEMA3D-202ENST00000444867 ARHGEF11O15085 1522 aa28.15■■■□□ 2.1
SEMA3D-202ENST00000444867 FGD6Q6ZV73 1430 aa28.14■■■□□ 2.09
SEMA3D-202ENST00000444867 MAGI3Q5TCQ9 1506 aa28.14■■■□□ 2.09
SEMA3D-202ENST00000444867 CHD1O14646 1710 aa28.13■■■□□ 2.09
SEMA3D-202ENST00000444867 CLSPNQ9HAW4 1339 aa28.1■■■□□ 2.09
SEMA3D-202ENST00000444867 JPH4Q96JJ6 628 aa28.1■■■□□ 2.09
SEMA3D-202ENST00000444867 MYOM3Q5VTT5 1437 aa28.1■■■□□ 2.09
SEMA3D-202ENST00000444867 CDK13Q14004 1512 aaKnown RBP28.09■■■□□ 2.09
SEMA3D-202ENST00000444867 FAM50AQ14320 339 aaKnown RBP28.07■■■□□ 2.08
SEMA3D-202ENST00000444867 NUP153P49790 1475 aaKnown RBP28.07■■■□□ 2.08
SEMA3D-202ENST00000444867 DHX57Q6P158 1386 aaKnown RBP28.04■■■□□ 2.08
SEMA3D-202ENST00000444867 ITGAEP38570 1179 aa28.03■■■□□ 2.08
SEMA3D-202ENST00000444867 SETD5Q9C0A6 1442 aa28■■■□□ 2.07
SEMA3D-202ENST00000444867 PTPN23Q9H3S7 1636 aa27.99■■■□□ 2.07
SEMA3D-202ENST00000444867 RAB3GAP2Q9H2M9 1393 aa27.96■■■□□ 2.07
SEMA3D-202ENST00000444867 TCOF1Q13428 1488 aaKnown RBP27.96■■■□□ 2.07
SEMA3D-202ENST00000444867 SHROOM2Q13796 1616 aa27.96■■■□□ 2.07
SEMA3D-202ENST00000444867 ABCA8O94911 1581 aa27.95■■■□□ 2.06
SEMA3D-202ENST00000444867 CDK11AQ9UQ88 783 aaPredicted RBP27.94■■■□□ 2.06
SEMA3D-202ENST00000444867 MIA2Q96PC5 1412 aa27.93■■■□□ 2.06
SEMA3D-202ENST00000444867 PLB1Q6P1J6 1458 aa27.93■■■□□ 2.06
SEMA3D-202ENST00000444867 PRG4Q92954 1404 aaPredicted RBP27.9■■■□□ 2.06
SEMA3D-202ENST00000444867 OSCARQ8IYS5 282 aa27.89■■■□□ 2.06
SEMA3D-202ENST00000444867 ADCY10Q96PN6 1610 aa27.88■■■□□ 2.05
SEMA3D-202ENST00000444867 TROQ12816 1431 aaPredicted RBP27.86■■■□□ 2.05
SEMA3D-202ENST00000444867 ARID3CA6NKF2 412 aa27.81■■■□□ 2.04
SEMA3D-202ENST00000444867 HFM1A2PYH4 1435 aa27.81■■■□□ 2.04
SEMA3D-202ENST00000444867 ITSN2Q9NZM3 1697 aa27.8■■■□□ 2.04
SEMA3D-202ENST00000444867 PTPRGP23470 1445 aa27.79■■■□□ 2.04
SEMA3D-202ENST00000444867 PTPRKQ15262 1439 aa27.79■■■□□ 2.04
SEMA3D-202ENST00000444867 CLASP1Q7Z460 1538 aa27.78■■■□□ 2.04
SEMA3D-202ENST00000444867 AKNAQ7Z591 1439 aa27.74■■■□□ 2.03
SEMA3D-202ENST00000444867 MAPKBP1O60336 1514 aa27.74■■■□□ 2.03
SEMA3D-202ENST00000444867 GCC2Q8IWJ2 1684 aa27.73■■■□□ 2.03
SEMA3D-202ENST00000444867 ATP10BO94823 1461 aa27.73■■■□□ 2.03
SEMA3D-202ENST00000444867 DNAJC5Q9H3Z4 198 aa27.7■■■□□ 2.03
SEMA3D-202ENST00000444867 KIF14Q15058 1648 aa27.7■■■□□ 2.02
SEMA3D-202ENST00000444867 NAIPQ13075 1403 aa27.69■■■□□ 2.02
SEMA3D-202ENST00000444867 DNMT1P26358 1616 aaKnown RBP27.68■■■□□ 2.02
SEMA3D-202ENST00000444867 UACAQ9BZF9 1416 aa27.66■■■□□ 2.02
SEMA3D-202ENST00000444867 PLEKHD1A6NEE1 506 aa27.65■■■□□ 2.02
SEMA3D-202ENST00000444867 GPATCH8Q9UKJ3 1502 aaKnown RBP27.63■■■□□ 2.01
SEMA3D-202ENST00000444867 ERCC6L2Q5T890 1561 aa27.61■■■□□ 2.01
SEMA3D-202ENST00000444867 DAPK1P53355 1430 aa27.6■■■□□ 2.01
SEMA3D-202ENST00000444867 ZNF316A6NFI3 1004 aaPredicted RBP27.6■■■□□ 2.01
SEMA3D-202ENST00000444867 CDC42BPAQ5VT25 1732 aa27.6■■■□□ 2.01
SEMA3D-202ENST00000444867 ABCC2Q92887 1545 aa27.6■■■□□ 2.01
SEMA3D-202ENST00000444867 ABCC10Q5T3U5 1492 aa27.59■■■□□ 2.01
SEMA3D-202ENST00000444867 ROCK1Q13464 1354 aa27.58■■■□□ 2.01
SEMA3D-202ENST00000444867 CAMSAP2Q08AD1 1489 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms