RNA–Protein interactions for RNA: ENST00000444376.7

HNRNPU-205, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-205ENST00000444376 CLIP1P30622 1438 aa21.59■■□□□ 1.05
HNRNPU-205ENST00000444376 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
HNRNPU-205ENST00000444376 NCLP19338 710 aaKnown RBP21.56■■□□□ 1.04
HNRNPU-205ENST00000444376 RRP7BPQ9NSQ0 103 aa21.56■■□□□ 1.04
HNRNPU-205ENST00000444376 TRIM44Q96DX7 344 aaPredicted RBP21.55■■□□□ 1.04
HNRNPU-205ENST00000444376 ANP32EQ9BTT0 268 aa21.51■■□□□ 1.03
HNRNPU-205ENST00000444376 CDK11BP21127 795 aaKnown RBP21.5■■□□□ 1.03
HNRNPU-205ENST00000444376 GOLGA6L22H0YM25 854 aa21.5■■□□□ 1.03
HNRNPU-205ENST00000444376 ZBTB7CA1YPR0 619 aa21.48■■□□□ 1.03
HNRNPU-205ENST00000444376 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
HNRNPU-205ENST00000444376 CHMP7Q8WUX9 453 aaPredicted RBP21.44■■□□□ 1.02
HNRNPU-205ENST00000444376 GOLGA3Q08378 1498 aa21.44■■□□□ 1.02
HNRNPU-205ENST00000444376 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
HNRNPU-205ENST00000444376 SUPT16HQ9Y5B9 1047 aaKnown RBP21.42■■□□□ 1.02
HNRNPU-205ENST00000444376 A0A0G2JS52 829 aa21.41■■□□□ 1.02
HNRNPU-205ENST00000444376 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
HNRNPU-205ENST00000444376 CFAP53Q96M91 514 aa21.4■■□□□ 1.02
HNRNPU-205ENST00000444376 C14orf37Q86TY3 774 aa21.4■■□□□ 1.02
HNRNPU-205ENST00000444376 CASC1Q6TDU7 716 aa21.39■■□□□ 1.02
HNRNPU-205ENST00000444376 SENP3-EIF4A1A0A087X0R7 540 aa21.39■■□□□ 1.01
HNRNPU-205ENST00000444376 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
HNRNPU-205ENST00000444376 MYO15BQ96JP2 1530 aa21.38■■□□□ 1.01
HNRNPU-205ENST00000444376 PPP1R15AO75807 674 aaPredicted RBP21.38■■□□□ 1.01
HNRNPU-205ENST00000444376 RGL3Q3MIN7 710 aa21.37■■□□□ 1.01
HNRNPU-205ENST00000444376 PTMAP06454 111 aaKnown RBP21.36■■□□□ 1.01
HNRNPU-205ENST00000444376 KNSTRNQ9Y448 316 aa21.36■■□□□ 1.01
HNRNPU-205ENST00000444376 PLEKHG5O94827 1062 aa21.36■■□□□ 1.01
HNRNPU-205ENST00000444376 FTSJ3Q8IY81 847 aaKnown RBP21.35■■□□□ 1.01
HNRNPU-205ENST00000444376 PPM1GO15355 546 aaPredicted RBP21.35■■□□□ 1.01
HNRNPU-205ENST00000444376 CDCA8Q53HL2 280 aa21.34■■□□□ 1.01
HNRNPU-205ENST00000444376 EEA1Q15075 1411 aa21.33■■□□□ 1
HNRNPU-205ENST00000444376 KCNH8Q96L42 1107 aa21.31■■□□□ 1
HNRNPU-205ENST00000444376 ZRSR1Q15695 479 aaKnown RBP21.31■■□□□ 1
HNRNPU-205ENST00000444376 CARD11Q9BXL7 1154 aa21.3■■□□□ 1
HNRNPU-205ENST00000444376 PLEKHD1A6NEE1 506 aa21.29■■□□□ 1
HNRNPU-205ENST00000444376 TPRNQ4KMQ1 711 aa21.29■■□□□ 1
HNRNPU-205ENST00000444376 PPP4R2Q9NY27 417 aa21.29■■□□□ 1
HNRNPU-205ENST00000444376 DNTTIP2Q5QJE6 756 aaKnown RBP21.28■■□□□ 1
HNRNPU-205ENST00000444376 LAS1LQ9Y4W2 734 aaKnown RBP21.27■■□□□ 1
HNRNPU-205ENST00000444376 TNNT2P45379 298 aaPredicted RBP21.27■■□□□ 1
HNRNPU-205ENST00000444376 NOP58Q9Y2X3 529 aaKnown RBP21.24■□□□□ 0.99
HNRNPU-205ENST00000444376 NEUROD2Q15784 382 aa21.23■□□□□ 0.99
HNRNPU-205ENST00000444376 MAPK8IP3Q9UPT6 1336 aa21.23■□□□□ 0.99
HNRNPU-205ENST00000444376 ERICH6BQ5W0A0 696 aa21.22■□□□□ 0.99
HNRNPU-205ENST00000444376 RGS3P49796 1198 aa21.21■□□□□ 0.99
HNRNPU-205ENST00000444376 NAP1L5Q96NT1 182 aaPredicted RBP21.21■□□□□ 0.99
HNRNPU-205ENST00000444376 CFDP1Q9UEE9 299 aaPredicted RBP21.2■□□□□ 0.98
HNRNPU-205ENST00000444376 FRAT1Q92837 279 aaPredicted RBP21.18■□□□□ 0.98
HNRNPU-205ENST00000444376 NUDCQ9Y266 331 aa21.17■□□□□ 0.98
HNRNPU-205ENST00000444376 HSP90AB1P08238 724 aaKnown RBP21.16■□□□□ 0.98
HNRNPU-205ENST00000444376 SIN3AQ96ST3 1273 aa21.16■□□□□ 0.98
HNRNPU-205ENST00000444376 TNIKQ9UKE5 1360 aa21.16■□□□□ 0.98
HNRNPU-205ENST00000444376 RTN4Q9NQC3 1192 aaKnown RBP21.15■□□□□ 0.98
HNRNPU-205ENST00000444376 CC2D1BQ5T0F9 858 aaKnown RBP21.15■□□□□ 0.98
HNRNPU-205ENST00000444376 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
HNRNPU-205ENST00000444376 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.97
HNRNPU-205ENST00000444376 HAP1P54257 671 aaPredicted RBP21.12■□□□□ 0.97
HNRNPU-205ENST00000444376 CHMP4BQ9H444 224 aaKnown RBP21.12■□□□□ 0.97
HNRNPU-205ENST00000444376 PLCB2Q00722 1185 aa21.11■□□□□ 0.97
HNRNPU-205ENST00000444376 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
HNRNPU-205ENST00000444376 MS4A1P11836 297 aa21.1■□□□□ 0.97
HNRNPU-205ENST00000444376 B4GALNT3Q6L9W6 998 aa21.09■□□□□ 0.97
HNRNPU-205ENST00000444376 GOLGA6L6A8MZA4 724 aa21.08■□□□□ 0.96
HNRNPU-205ENST00000444376 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
HNRNPU-205ENST00000444376 POGKQ9P215 609 aa21.07■□□□□ 0.96
HNRNPU-205ENST00000444376 ARID4BQ4LE39 1312 aaPredicted RBP21.05■□□□□ 0.96
HNRNPU-205ENST00000444376 OS9Q13438 667 aaPredicted RBP21.05■□□□□ 0.96
HNRNPU-205ENST00000444376 TULP1O00294 542 aaPredicted RBP21.04■□□□□ 0.96
HNRNPU-205ENST00000444376 PNNQ9H307 717 aaKnown RBP21.04■□□□□ 0.96
HNRNPU-205ENST00000444376 TAOK2Q9UL54 1235 aa21.04■□□□□ 0.96
HNRNPU-205ENST00000444376 U2SURPO15042 1029 aaKnown RBP21.03■□□□□ 0.96
HNRNPU-205ENST00000444376 HSCBQ8IWL3 235 aa21.02■□□□□ 0.96
HNRNPU-205ENST00000444376 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
HNRNPU-205ENST00000444376 TMF1P82094 1093 aa21■□□□□ 0.95
HNRNPU-205ENST00000444376 FGD1P98174 961 aa21■□□□□ 0.95
HNRNPU-205ENST00000444376 KCNJ4P48050 445 aa20.98■□□□□ 0.95
HNRNPU-205ENST00000444376 NAP1L2Q9ULW6 460 aaPredicted RBP20.96■□□□□ 0.95
HNRNPU-205ENST00000444376 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
HNRNPU-205ENST00000444376 L1TD1Q5T7N2 865 aaKnown RBP20.95■□□□□ 0.94
HNRNPU-205ENST00000444376 DCAF11Q8TEB1 546 aa20.94■□□□□ 0.94
HNRNPU-205ENST00000444376 LMOD2Q6P5Q4 547 aa20.94■□□□□ 0.94
HNRNPU-205ENST00000444376 CCER2I3L3R5 266 aa20.93■□□□□ 0.94
HNRNPU-205ENST00000444376 NRDCO43847 1150 aa20.93■□□□□ 0.94
HNRNPU-205ENST00000444376 SPRYD3Q8NCJ5 442 aa20.92■□□□□ 0.94
HNRNPU-205ENST00000444376 GOLGA6L4A6NEF3 574 aa20.91■□□□□ 0.94
HNRNPU-205ENST00000444376 DEKP35659 375 aaKnown RBP20.91■□□□□ 0.94
HNRNPU-205ENST00000444376 MSNP26038 577 aaKnown RBP20.91■□□□□ 0.94
HNRNPU-205ENST00000444376 MCCP23508 829 aa20.91■□□□□ 0.94
HNRNPU-205ENST00000444376 CHAF1AQ13111 956 aaPredicted RBP20.9■□□□□ 0.94
HNRNPU-205ENST00000444376 FHAD1B1AJZ9 1412 aa20.89■□□□□ 0.93
HNRNPU-205ENST00000444376 NPHP1O15259 732 aa20.88■□□□□ 0.93
HNRNPU-205ENST00000444376 KANK1Q14678 1352 aa20.87■□□□□ 0.93
HNRNPU-205ENST00000444376 RBM19Q9Y4C8 960 aaKnown RBP20.86■□□□□ 0.93
HNRNPU-205ENST00000444376 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
HNRNPU-205ENST00000444376 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
HNRNPU-205ENST00000444376 HSPA5P11021 654 aaKnown RBP20.85■□□□□ 0.93
HNRNPU-205ENST00000444376 TIMELESSQ9UNS1 1208 aa20.85■□□□□ 0.93
HNRNPU-205ENST00000444376 CFAP44Q96MT7 982 aa20.84■□□□□ 0.93
HNRNPU-205ENST00000444376 GOLGA2Q08379 1002 aa20.84■□□□□ 0.93
HNRNPU-205ENST00000444376 DRC7Q8IY82 874 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms