RNA–Protein interactions for RNA: ENST00000444288.1

MED28P3-201, Transcript of mediator complex subunit 28 pseudogene 3, humanhuman

BASIC

Gene MED28P3, Length 531 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28P3-201ENST00000444288 PHF12Q96QT6 1004 aa9.41□□□□□ -0.9
MED28P3-201ENST00000444288 SUPT5HO00267 1087 aaKnown RBP9.4□□□□□ -0.9
MED28P3-201ENST00000444288 POTEIP0CG38 1075 aa9.4□□□□□ -0.9
MED28P3-201ENST00000444288 SCRIBQ14160 1630 aa9.39□□□□□ -0.91
MED28P3-201ENST00000444288 HRCP23327 699 aa9.39□□□□□ -0.91
MED28P3-201ENST00000444288 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
MED28P3-201ENST00000444288 GALR2O43603 387 aaPredicted RBP9.36□□□□□ -0.91
MED28P3-201ENST00000444288 NPM1P06748 294 aaKnown RBP eCLIP9.34□□□□□ -0.91
MED28P3-201ENST00000444288 MIER1Q8N108 512 aa9.34□□□□□ -0.91
MED28P3-201ENST00000444288 TSPYL2Q9H2G4 693 aaPredicted RBP9.33□□□□□ -0.92
MED28P3-201ENST00000444288 PAK3O75914 559 aaPredicted RBP9.32□□□□□ -0.92
MED28P3-201ENST00000444288 EIF4G1Q04637 1599 aaKnown RBP9.32□□□□□ -0.92
MED28P3-201ENST00000444288 DCBLD2Q96PD2 775 aa9.29□□□□□ -0.92
MED28P3-201ENST00000444288 PLCD3Q8N3E9 789 aa9.27□□□□□ -0.93
MED28P3-201ENST00000444288 LHX8Q68G74 356 aa9.25□□□□□ -0.93
MED28P3-201ENST00000444288 RASEFQ8IZ41 740 aa9.25□□□□□ -0.93
MED28P3-201ENST00000444288 MS4A3Q96HJ5 214 aa9.25□□□□□ -0.93
MED28P3-201ENST00000444288 CUX2O14529 1486 aa9.24□□□□□ -0.93
MED28P3-201ENST00000444288 PLEKHG5O94827 1062 aa9.21□□□□□ -0.94
MED28P3-201ENST00000444288 CCDC61Q9Y6R9 512 aa9.21□□□□□ -0.94
MED28P3-201ENST00000444288 CLCN6P51797 869 aa9.2□□□□□ -0.94
MED28P3-201ENST00000444288 PELP1Q8IZL8 1130 aaKnown RBP9.19□□□□□ -0.94
MED28P3-201ENST00000444288 TRPC6Q9Y210 931 aa9.17□□□□□ -0.94
MED28P3-201ENST00000444288 MAP3K13O43283 966 aa9.14□□□□□ -0.95
MED28P3-201ENST00000444288 KIF12Q96FN5 646 aa9.14□□□□□ -0.95
MED28P3-201ENST00000444288 NUBP1P53384 320 aa9.13□□□□□ -0.95
MED28P3-201ENST00000444288 POTEB2H3BUK9 544 aa9.12□□□□□ -0.95
MED28P3-201ENST00000444288 PCGF6Q9BYE7 350 aa9.11□□□□□ -0.95
MED28P3-201ENST00000444288 ATMINO43313 823 aaPredicted RBP9.1□□□□□ -0.95
MED28P3-201ENST00000444288 ATN1P54259 1190 aaPredicted RBP9.08□□□□□ -0.96
MED28P3-201ENST00000444288 ASTLQ6HA08 431 aaPredicted RBP9.08□□□□□ -0.96
MED28P3-201ENST00000444288 RSF1Q96T23 1441 aaPredicted RBP9.06□□□□□ -0.96
MED28P3-201ENST00000444288 VASPP50552 380 aaPredicted RBP9.06□□□□□ -0.96
MED28P3-201ENST00000444288 BMP2KQ9NSY1 1161 aaPredicted RBP9.06□□□□□ -0.96
MED28P3-201ENST00000444288 ZBTB47Q9UFB7 747 aaPredicted RBP9.06□□□□□ -0.96
MED28P3-201ENST00000444288 METRNQ9UJH8 293 aa9.06□□□□□ -0.96
MED28P3-201ENST00000444288 FBXO3Q9UK99 471 aa9.06□□□□□ -0.96
MED28P3-201ENST00000444288 BAZ1AQ9NRL2 1556 aaPredicted RBP9.04□□□□□ -0.96
MED28P3-201ENST00000444288 PPARGC1BQ86YN6 1023 aaKnown RBP9.04□□□□□ -0.96
MED28P3-201ENST00000444288 FAM212AQ96EL1 285 aa9.04□□□□□ -0.96
MED28P3-201ENST00000444288 PCDHB13Q9Y5F0 798 aa9.04□□□□□ -0.96
MED28P3-201ENST00000444288 DCAF8Q5TAQ9 597 aa9.02□□□□□ -0.97
MED28P3-201ENST00000444288 KLHL34Q8N239 644 aa9.02□□□□□ -0.97
MED28P3-201ENST00000444288 OTUD5Q96G74 571 aa9.02□□□□□ -0.97
MED28P3-201ENST00000444288 PYGBP11216 843 aa9.01□□□□□ -0.97
MED28P3-201ENST00000444288 IFNL1Q8IU54 200 aa9.01□□□□□ -0.97
MED28P3-201ENST00000444288 POTEJP0CG39 1038 aa9□□□□□ -0.97
MED28P3-201ENST00000444288 TRIM26Q12899 539 aaPredicted RBP9□□□□□ -0.97
MED28P3-201ENST00000444288 TTLL13PA6NNM8 815 aa8.99□□□□□ -0.97
MED28P3-201ENST00000444288 SLC39A7Q92504 469 aa8.98□□□□□ -0.97
MED28P3-201ENST00000444288 POTEFA5A3E0 1075 aa8.97□□□□□ -0.97
MED28P3-201ENST00000444288 THOC2Q8NI27 1593 aaKnown RBP8.97□□□□□ -0.97
MED28P3-201ENST00000444288 C7P10643 843 aa8.96□□□□□ -0.98
MED28P3-201ENST00000444288 TIE1P35590 1138 aa8.96□□□□□ -0.98
MED28P3-201ENST00000444288 WIZO95785 1651 aa8.94□□□□□ -0.98
MED28P3-201ENST00000444288 IFNLR1Q8IU57 520 aaPredicted RBP8.94□□□□□ -0.98
MED28P3-201ENST00000444288 PCDHB8Q9UN66 801 aa8.94□□□□□ -0.98
MED28P3-201ENST00000444288 TRIM35Q9UPQ4 493 aa8.94□□□□□ -0.98
MED28P3-201ENST00000444288 COLQQ9Y215 455 aaPredicted RBP8.94□□□□□ -0.98
MED28P3-201ENST00000444288 ZEB1P37275 1124 aaPredicted RBP8.93□□□□□ -0.98
MED28P3-201ENST00000444288 TRIM41Q8WV44 630 aa8.93□□□□□ -0.98
MED28P3-201ENST00000444288 TMEM106CQ9BVX2 250 aa8.93□□□□□ -0.98
MED28P3-201ENST00000444288 ERCC6Q03468 1493 aa8.93□□□□□ -0.98
MED28P3-201ENST00000444288 MROH2BQ7Z745 1585 aa8.92□□□□□ -0.98
MED28P3-201ENST00000444288 LOC105371045A0A1W2PR82 267 aa8.92□□□□□ -0.98
MED28P3-201ENST00000444288 SMARCA4P51532 1647 aa8.91□□□□□ -0.98
MED28P3-201ENST00000444288 SGIP1Q9BQI5 828 aa8.89□□□□□ -0.99
MED28P3-201ENST00000444288 SEC24BO95487 1268 aa8.88□□□□□ -0.99
MED28P3-201ENST00000444288 TOP2AP11388 1531 aaKnown RBP8.88□□□□□ -0.99
MED28P3-201ENST00000444288 ATAD2BQ9ULI0 1458 aa8.87□□□□□ -0.99
MED28P3-201ENST00000444288 CIZ1Q9ULV3 898 aaPredicted RBP8.85□□□□□ -0.99
MED28P3-201ENST00000444288 SPOCK2Q92563 424 aa8.84□□□□□ -0.99
MED28P3-201ENST00000444288 NCAPD3P42695 1498 aa8.83□□□□□ -1
MED28P3-201ENST00000444288 GSE1Q14687 1217 aa8.83□□□□□ -1
MED28P3-201ENST00000444288 NESP48681 1621 aa8.83□□□□□ -1
MED28P3-201ENST00000444288 SMARCA2P51531 1590 aa8.82□□□□□ -1
MED28P3-201ENST00000444288 WRNQ14191 1432 aaPredicted RBP eCLIP8.8□□□□□ -1
MED28P3-201ENST00000444288 HMGXB3Q12766 1538 aa8.8□□□□□ -1
MED28P3-201ENST00000444288 SCUBE2Q9NQ36 999 aa8.8□□□□□ -1
MED28P3-201ENST00000444288 KIF21AQ7Z4S6 1674 aa8.8□□□□□ -1
MED28P3-201ENST00000444288 BAZ1BQ9UIG0 1483 aaKnown RBP8.79□□□□□ -1
MED28P3-201ENST00000444288 IER5LQ5T953 404 aa8.78□□□□□ -1
MED28P3-201ENST00000444288 PLCG2P16885 1265 aa8.77□□□□□ -1.01
MED28P3-201ENST00000444288 IRX5P78411 483 aaPredicted RBP8.77□□□□□ -1.01
MED28P3-201ENST00000444288 MAMSTRQ6ZN01 415 aa8.77□□□□□ -1.01
MED28P3-201ENST00000444288 PEG3Q9GZU2 1588 aa8.77□□□□□ -1.01
MED28P3-201ENST00000444288 ZNF467Q7Z7K2 595 aaPredicted RBP8.76□□□□□ -1.01
MED28P3-201ENST00000444288 ABCC8Q09428 1581 aa8.74□□□□□ -1.01
MED28P3-201ENST00000444288 PSEN1P49768 467 aa8.74□□□□□ -1.01
MED28P3-201ENST00000444288 LCE2DQ5TA82 110 aaPredicted RBP8.74□□□□□ -1.01
MED28P3-201ENST00000444288 FAM163AQ96GL9 167 aaPredicted RBP8.74□□□□□ -1.01
MED28P3-201ENST00000444288 POTEMA6NI47 508 aa8.73□□□□□ -1.01
MED28P3-201ENST00000444288 CHRM1P11229 460 aaPredicted RBP8.73□□□□□ -1.01
MED28P3-201ENST00000444288 LAMC3Q9Y6N6 1575 aa8.73□□□□□ -1.01
MED28P3-201ENST00000444288 KIF21BO75037 1637 aa8.72□□□□□ -1.01
MED28P3-201ENST00000444288 EEA1Q15075 1411 aa8.72□□□□□ -1.01
MED28P3-201ENST00000444288 POTEGQ6S5H5 508 aa8.71□□□□□ -1.02
MED28P3-201ENST00000444288 RIMBP3CA6NJZ7 1639 aa8.71□□□□□ -1.02
MED28P3-201ENST00000444288 RIMBP3BA6NNM3 1639 aa8.71□□□□□ -1.02
MED28P3-201ENST00000444288 RIMBP3Q9UFD9 1639 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms