RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 SCRIBQ14160 1630 aa13.51□□□□□ -0.25
ATL1-202ENST00000441560 RUSC2Q8N2Y8 1516 aa13.51□□□□□ -0.25
ATL1-202ENST00000441560 CLIP1P30622 1438 aa13.51□□□□□ -0.25
ATL1-202ENST00000441560 RANGAP1P46060 587 aaPredicted RBP13.5□□□□□ -0.25
ATL1-202ENST00000441560 BRPF3Q9ULD4 1205 aa13.5□□□□□ -0.25
ATL1-202ENST00000441560 GLIPR1L2Q4G1C9 344 aa13.5□□□□□ -0.25
ATL1-202ENST00000441560 VPS8Q8N3P4 1428 aa13.49□□□□□ -0.25
ATL1-202ENST00000441560 WASHC2AQ641Q2 1341 aa13.48□□□□□ -0.25
ATL1-202ENST00000441560 NEFMP07197 916 aa13.47□□□□□ -0.25
ATL1-202ENST00000441560 C11orf95C9JLR9 678 aaPredicted RBP13.46□□□□□ -0.25
ATL1-202ENST00000441560 EEA1Q15075 1411 aa13.45□□□□□ -0.26
ATL1-202ENST00000441560 LAS1LQ9Y4W2 734 aaKnown RBP13.45□□□□□ -0.26
ATL1-202ENST00000441560 EIF4G1Q04637 1599 aaKnown RBP13.44□□□□□ -0.26
ATL1-202ENST00000441560 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
ATL1-202ENST00000441560 RSPH6AQ9H0K4 717 aa13.43□□□□□ -0.26
ATL1-202ENST00000441560 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
ATL1-202ENST00000441560 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
ATL1-202ENST00000441560 WDR97A6NE52 1622 aa13.41□□□□□ -0.26
ATL1-202ENST00000441560 WIZO95785 1651 aa13.41□□□□□ -0.26
ATL1-202ENST00000441560 A0A0U1RQG5 324 aaPredicted RBP13.4□□□□□ -0.26
ATL1-202ENST00000441560 NPM2Q86SE8 214 aaKnown RBP13.38□□□□□ -0.27
ATL1-202ENST00000441560 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
ATL1-202ENST00000441560 SIN3AQ96ST3 1273 aa13.38□□□□□ -0.27
ATL1-202ENST00000441560 KANK4Q5T7N3 995 aaPredicted RBP13.34□□□□□ -0.27
ATL1-202ENST00000441560 MAPKBP1O60336 1514 aa13.33□□□□□ -0.28
ATL1-202ENST00000441560 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.28
ATL1-202ENST00000441560 GSE1Q14687 1217 aa13.32□□□□□ -0.28
ATL1-202ENST00000441560 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
ATL1-202ENST00000441560 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
ATL1-202ENST00000441560 CUX2O14529 1486 aa13.29□□□□□ -0.28
ATL1-202ENST00000441560 PPM1GO15355 546 aaPredicted RBP13.29□□□□□ -0.28
ATL1-202ENST00000441560 KIF21BO75037 1637 aa13.28□□□□□ -0.28
ATL1-202ENST00000441560 RBM10P98175 930 aaKnown RBP13.27□□□□□ -0.28
ATL1-202ENST00000441560 RRBP1Q9P2E9 1410 aaKnown RBP13.26□□□□□ -0.29
ATL1-202ENST00000441560 FAM9BQ8IZU0 186 aa13.26□□□□□ -0.29
ATL1-202ENST00000441560 BAZ1AQ9NRL2 1556 aaPredicted RBP13.26□□□□□ -0.29
ATL1-202ENST00000441560 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
ATL1-202ENST00000441560 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
ATL1-202ENST00000441560 PDE4CQ08493 712 aa13.24□□□□□ -0.29
ATL1-202ENST00000441560 FGD1P98174 961 aa13.23□□□□□ -0.29
ATL1-202ENST00000441560 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
ATL1-202ENST00000441560 AAMPQ13685 434 aa13.22□□□□□ -0.29
ATL1-202ENST00000441560 FAM43AQ8N2R8 423 aa13.22□□□□□ -0.29
ATL1-202ENST00000441560 HSP90AA2PQ14568 343 aaPredicted RBP13.21□□□□□ -0.3
ATL1-202ENST00000441560 RAPGEF2Q9Y4G8 1499 aa13.2□□□□□ -0.3
ATL1-202ENST00000441560 ZBED9Q6R2W3 1325 aa13.19□□□□□ -0.3
ATL1-202ENST00000441560 NFKBIBQ15653 356 aa13.18□□□□□ -0.3
ATL1-202ENST00000441560 AKNAQ7Z591 1439 aa13.18□□□□□ -0.3
ATL1-202ENST00000441560 SETD5Q9C0A6 1442 aa13.16□□□□□ -0.3
ATL1-202ENST00000441560 MRS2Q9HD23 443 aa13.16□□□□□ -0.3
ATL1-202ENST00000441560 PDE4AP27815 886 aa13.15□□□□□ -0.3
ATL1-202ENST00000441560 DCAF11Q8TEB1 546 aa13.15□□□□□ -0.3
ATL1-202ENST00000441560 RRP9O43818 475 aaKnown RBP13.12□□□□□ -0.31
ATL1-202ENST00000441560 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
ATL1-202ENST00000441560 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
ATL1-202ENST00000441560 NCAPD3P42695 1498 aa13.12□□□□□ -0.31
ATL1-202ENST00000441560 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
ATL1-202ENST00000441560 PDIA4P13667 645 aaKnown RBP13.11□□□□□ -0.31
ATL1-202ENST00000441560 SLC4A3P48751 1232 aa13.1□□□□□ -0.31
ATL1-202ENST00000441560 TCERG1O14776 1098 aaKnown RBP13.1□□□□□ -0.31
ATL1-202ENST00000441560 NAP1L5Q96NT1 182 aaPredicted RBP13.1□□□□□ -0.31
ATL1-202ENST00000441560 BACH2Q9BYV9 841 aa13.1□□□□□ -0.31
ATL1-202ENST00000441560 HSP90AA1P07900 732 aaKnown RBP13.1□□□□□ -0.31
ATL1-202ENST00000441560 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
ATL1-202ENST00000441560 AEBP2Q6ZN18 517 aaPredicted RBP13.09□□□□□ -0.31
ATL1-202ENST00000441560 RRAGDQ9NQL2 400 aaPredicted RBP13.08□□□□□ -0.32
ATL1-202ENST00000441560 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
ATL1-202ENST00000441560 DDRGK1Q96HY6 314 aa13.07□□□□□ -0.32
ATL1-202ENST00000441560 PEG3Q9GZU2 1588 aa13.07□□□□□ -0.32
ATL1-202ENST00000441560 TOP2AP11388 1531 aaKnown RBP13.07□□□□□ -0.32
ATL1-202ENST00000441560 FAM50AQ14320 339 aaKnown RBP13.06□□□□□ -0.32
ATL1-202ENST00000441560 PRKRIP1Q9H875 184 aaPredicted RBP13.06□□□□□ -0.32
ATL1-202ENST00000441560 NUDCQ9Y266 331 aa13.06□□□□□ -0.32
ATL1-202ENST00000441560 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
ATL1-202ENST00000441560 FRAT2O75474 233 aaPredicted RBP13.05□□□□□ -0.32
ATL1-202ENST00000441560 RNF123Q5XPI4 1314 aa13.05□□□□□ -0.32
ATL1-202ENST00000441560 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
ATL1-202ENST00000441560 MS4A1P11836 297 aa13□□□□□ -0.33
ATL1-202ENST00000441560 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
ATL1-202ENST00000441560 PNNQ9H307 717 aaKnown RBP13□□□□□ -0.33
ATL1-202ENST00000441560 CNTLNQ9NXG0 1405 aa13□□□□□ -0.33
ATL1-202ENST00000441560 EXOC6Q8TAG9 804 aa12.99□□□□□ -0.33
ATL1-202ENST00000441560 SYNJ1O43426 1573 aa12.99□□□□□ -0.33
ATL1-202ENST00000441560 FHAD1B1AJZ9 1412 aa12.99□□□□□ -0.33
ATL1-202ENST00000441560 RGS3P49796 1198 aa12.99□□□□□ -0.33
ATL1-202ENST00000441560 SKAP1Q86WV1 359 aa12.97□□□□□ -0.33
ATL1-202ENST00000441560 ARID4BQ4LE39 1312 aaPredicted RBP12.96□□□□□ -0.33
ATL1-202ENST00000441560 PRDM4Q9UKN5 801 aa12.96□□□□□ -0.33
ATL1-202ENST00000441560 ARXQ96QS3 562 aa12.95□□□□□ -0.34
ATL1-202ENST00000441560 EIF4G2P78344 907 aaKnown RBP eCLIP12.94□□□□□ -0.34
ATL1-202ENST00000441560 POGKQ9P215 609 aa12.94□□□□□ -0.34
ATL1-202ENST00000441560 NCOA2Q15596 1464 aa12.92□□□□□ -0.34
ATL1-202ENST00000441560 RRP1P56182 461 aaKnown RBP12.92□□□□□ -0.34
ATL1-202ENST00000441560 PHLDB1Q86UU1 1377 aa12.92□□□□□ -0.34
ATL1-202ENST00000441560 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
ATL1-202ENST00000441560 CLCN1P35523 988 aa12.89□□□□□ -0.35
ATL1-202ENST00000441560 L1TD1Q5T7N2 865 aaKnown RBP12.89□□□□□ -0.35
ATL1-202ENST00000441560 CCDC7Q96M83 1385 aa12.88□□□□□ -0.35
ATL1-202ENST00000441560 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
ATL1-202ENST00000441560 PDCL3Q9H2J4 239 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms