RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 ERCC6L2Q5T890 1561 aa19.69■□□□□ 0.74
COPS7B-212ENST00000436564 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
COPS7B-212ENST00000436564 DMRT2Q9Y5R5 561 aa19.67■□□□□ 0.74
COPS7B-212ENST00000436564 NUP160Q12769 1436 aa19.66■□□□□ 0.74
COPS7B-212ENST00000436564 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
COPS7B-212ENST00000436564 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
COPS7B-212ENST00000436564 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
COPS7B-212ENST00000436564 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
COPS7B-212ENST00000436564 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
COPS7B-212ENST00000436564 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
COPS7B-212ENST00000436564 JPH4Q96JJ6 628 aa19.54■□□□□ 0.72
COPS7B-212ENST00000436564 SHROOM2Q13796 1616 aa19.52■□□□□ 0.72
COPS7B-212ENST00000436564 NPM1P06748 294 aaKnown RBP eCLIP19.52■□□□□ 0.72
COPS7B-212ENST00000436564 FAM69CQ0P6D2 419 aa19.52■□□□□ 0.72
COPS7B-212ENST00000436564 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
COPS7B-212ENST00000436564 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
COPS7B-212ENST00000436564 ABCC10Q5T3U5 1492 aa19.43■□□□□ 0.7
COPS7B-212ENST00000436564 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
COPS7B-212ENST00000436564 KIF13AQ9H1H9 1805 aa19.4■□□□□ 0.7
COPS7B-212ENST00000436564 KCNA4P22459 653 aa19.39■□□□□ 0.69
COPS7B-212ENST00000436564 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
COPS7B-212ENST00000436564 KDM4FA0A1W2PPD8 638 aa19.33■□□□□ 0.68
COPS7B-212ENST00000436564 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
COPS7B-212ENST00000436564 RNF216Q9NWF9 866 aaPredicted RBP19.32■□□□□ 0.68
COPS7B-212ENST00000436564 DIP2BQ9P265 1576 aa19.3■□□□□ 0.68
COPS7B-212ENST00000436564 ADCY10Q96PN6 1610 aa19.27■□□□□ 0.68
COPS7B-212ENST00000436564 KDM6BO15054 1643 aa19.26■□□□□ 0.67
COPS7B-212ENST00000436564 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
COPS7B-212ENST00000436564 TTBK1Q5TCY1 1321 aaPredicted RBP19.24■□□□□ 0.67
COPS7B-212ENST00000436564 IGF1RP08069 1367 aa19.22■□□□□ 0.67
COPS7B-212ENST00000436564 NPM3O75607 178 aaKnown RBP19.22■□□□□ 0.67
COPS7B-212ENST00000436564 HOXD11P31277 338 aaPredicted RBP19.22■□□□□ 0.67
COPS7B-212ENST00000436564 PTPRGP23470 1445 aa19.21■□□□□ 0.67
COPS7B-212ENST00000436564 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
COPS7B-212ENST00000436564 ILDR1Q86SU0 546 aaPredicted RBP19.17■□□□□ 0.66
COPS7B-212ENST00000436564 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
COPS7B-212ENST00000436564 TSPOAP1O95153 1857 aa19.12■□□□□ 0.65
COPS7B-212ENST00000436564 CARMIL2Q6F5E8 1435 aa19.12■□□□□ 0.65
COPS7B-212ENST00000436564 ABCC2Q92887 1545 aa19.1■□□□□ 0.65
COPS7B-212ENST00000436564 PLB1Q6P1J6 1458 aa19.09■□□□□ 0.65
COPS7B-212ENST00000436564 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
COPS7B-212ENST00000436564 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
COPS7B-212ENST00000436564 CUL7Q14999 1698 aa19.08■□□□□ 0.65
COPS7B-212ENST00000436564 ADGRL1O94910 1474 aa19.03■□□□□ 0.64
COPS7B-212ENST00000436564 GLI2P10070 1586 aa19.02■□□□□ 0.64
COPS7B-212ENST00000436564 UACAQ9BZF9 1416 aa19.02■□□□□ 0.64
COPS7B-212ENST00000436564 UHRF1BP1LA0JNW5 1464 aa19.01■□□□□ 0.63
COPS7B-212ENST00000436564 COL17A1Q9UMD9 1497 aaPredicted RBP18.97■□□□□ 0.63
COPS7B-212ENST00000436564 EPRSP07814 1512 aaKnown RBP18.96■□□□□ 0.63
COPS7B-212ENST00000436564 IQGAP2Q13576 1575 aa18.96■□□□□ 0.63
COPS7B-212ENST00000436564 TEX14Q8IWB6 1497 aa18.95■□□□□ 0.62
COPS7B-212ENST00000436564 PPRC1Q5VV67 1664 aaKnown RBP18.95■□□□□ 0.62
COPS7B-212ENST00000436564 DISP1Q96F81 1524 aa18.93■□□□□ 0.62
COPS7B-212ENST00000436564 KDM5BQ9UGL1 1544 aa18.93■□□□□ 0.62
COPS7B-212ENST00000436564 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
COPS7B-212ENST00000436564 HECW2Q9P2P5 1572 aa18.87■□□□□ 0.61
COPS7B-212ENST00000436564 MAP3K4Q9Y6R4 1608 aa18.87■□□□□ 0.61
COPS7B-212ENST00000436564 UGGT2Q9NYU1 1516 aa18.84■□□□□ 0.61
COPS7B-212ENST00000436564 RAPGEF2Q9Y4G8 1499 aa18.84■□□□□ 0.61
COPS7B-212ENST00000436564 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
COPS7B-212ENST00000436564 ZCCHC11Q5TAX3 1644 aaKnown RBP18.82■□□□□ 0.6
COPS7B-212ENST00000436564 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
COPS7B-212ENST00000436564 CD109Q6YHK3 1445 aa18.8■□□□□ 0.6
COPS7B-212ENST00000436564 KIAA0556O60303 1618 aa18.78■□□□□ 0.6
COPS7B-212ENST00000436564 MAGI3Q5TCQ9 1506 aa18.75■□□□□ 0.59
COPS7B-212ENST00000436564 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
COPS7B-212ENST00000436564 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
COPS7B-212ENST00000436564 FBXO41Q8TF61 875 aa18.69■□□□□ 0.58
COPS7B-212ENST00000436564 ABCA8O94911 1581 aa18.65■□□□□ 0.58
COPS7B-212ENST00000436564 ARID3CA6NKF2 412 aa18.65■□□□□ 0.58
COPS7B-212ENST00000436564 CFAP43Q8NDM7 1665 aa18.65■□□□□ 0.58
COPS7B-212ENST00000436564 ARAP3Q8WWN8 1544 aa18.61■□□□□ 0.57
COPS7B-212ENST00000436564 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
COPS7B-212ENST00000436564 KIF21BO75037 1637 aa18.6■□□□□ 0.57
COPS7B-212ENST00000436564 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
COPS7B-212ENST00000436564 P3H3Q8IVL6 736 aa18.59■□□□□ 0.57
COPS7B-212ENST00000436564 RAPGEF3O95398 923 aa18.58■□□□□ 0.56
COPS7B-212ENST00000436564 PTPRMP28827 1452 aa18.57■□□□□ 0.56
COPS7B-212ENST00000436564 ARID4BQ4LE39 1312 aaPredicted RBP18.56■□□□□ 0.56
COPS7B-212ENST00000436564 CTTNBP2Q8WZ74 1663 aa18.55■□□□□ 0.56
COPS7B-212ENST00000436564 ATP10BO94823 1461 aa18.55■□□□□ 0.56
COPS7B-212ENST00000436564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
COPS7B-212ENST00000436564 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
COPS7B-212ENST00000436564 PRXQ9BXM0 1461 aa18.53■□□□□ 0.56
COPS7B-212ENST00000436564 NEO1Q92859 1461 aa18.48■□□□□ 0.55
COPS7B-212ENST00000436564 ADAMTSL3P82987 1691 aa18.47■□□□□ 0.55
COPS7B-212ENST00000436564 ABCA9Q8IUA7 1624 aa18.46■□□□□ 0.55
COPS7B-212ENST00000436564 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
COPS7B-212ENST00000436564 LMTK3Q96Q04 1460 aa18.41■□□□□ 0.54
COPS7B-212ENST00000436564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.54
COPS7B-212ENST00000436564 PLEKHD1A6NEE1 506 aa18.39■□□□□ 0.53
COPS7B-212ENST00000436564 HSPA2P54652 639 aa18.39■□□□□ 0.53
COPS7B-212ENST00000436564 MADDQ8WXG6 1647 aa18.38■□□□□ 0.53
COPS7B-212ENST00000436564 BCORL1Q5H9F3 1711 aa18.38■□□□□ 0.53
COPS7B-212ENST00000436564 RANGAP1P46060 587 aaPredicted RBP18.38■□□□□ 0.53
COPS7B-212ENST00000436564 DENND4BO75064 1496 aaPredicted RBP18.38■□□□□ 0.53
COPS7B-212ENST00000436564 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
COPS7B-212ENST00000436564 FRMPD1Q5SYB0 1578 aa18.37■□□□□ 0.53
COPS7B-212ENST00000436564 RAPGEF6Q8TEU7 1601 aa18.36■□□□□ 0.53
COPS7B-212ENST00000436564 POGZQ7Z3K3 1410 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms