RNA–Protein interactions for RNA: ENST00000435803.5

ABCA13-204, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCA13, Length 17,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-204ENST00000435803 CCDC180Q9P1Z9 1646 aa6.52□□□□□ -1.37
ABCA13-204ENST00000435803 CANXP27824 592 aaKnown RBP6.52□□□□□ -1.37
ABCA13-204ENST00000435803 A0A0U1RQG5 324 aaPredicted RBP6.52□□□□□ -1.37
ABCA13-204ENST00000435803 CSRNP3Q8WYN3 585 aa6.52□□□□□ -1.37
ABCA13-204ENST00000435803 DEKP35659 375 aaKnown RBP6.51□□□□□ -1.37
ABCA13-204ENST00000435803 TAF3Q5VWG9 929 aa6.5□□□□□ -1.37
ABCA13-204ENST00000435803 CASC1Q6TDU7 716 aa6.5□□□□□ -1.37
ABCA13-204ENST00000435803 EEA1Q15075 1411 aa6.5□□□□□ -1.37
ABCA13-204ENST00000435803 PPP4R2Q9NY27 417 aa6.49□□□□□ -1.37
ABCA13-204ENST00000435803 FBXO3Q9UK99 471 aa6.49□□□□□ -1.37
ABCA13-204ENST00000435803 CDCA8Q53HL2 280 aa6.49□□□□□ -1.37
ABCA13-204ENST00000435803 NOP58Q9Y2X3 529 aaKnown RBP6.49□□□□□ -1.37
ABCA13-204ENST00000435803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.49□□□□□ -1.37
ABCA13-204ENST00000435803 FKBP8Q14318 412 aa6.49□□□□□ -1.37
ABCA13-204ENST00000435803 MYH16Q9H6N6 1097 aa6.48□□□□□ -1.37
ABCA13-204ENST00000435803 MSNP26038 577 aaKnown RBP6.48□□□□□ -1.37
ABCA13-204ENST00000435803 HSP90AA2PQ14568 343 aaPredicted RBP6.48□□□□□ -1.37
ABCA13-204ENST00000435803 BRD2P25440 801 aaKnown RBP6.48□□□□□ -1.37
ABCA13-204ENST00000435803 HAP1P54257 671 aaPredicted RBP6.47□□□□□ -1.37
ABCA13-204ENST00000435803 CCER2I3L3R5 266 aa6.47□□□□□ -1.37
ABCA13-204ENST00000435803 ISY1Q9ULR0 285 aaKnown RBP6.46□□□□□ -1.38
ABCA13-204ENST00000435803 VSIG10Q8N0Z9 540 aa6.46□□□□□ -1.38
ABCA13-204ENST00000435803 ZRSR1Q15695 479 aaKnown RBP6.45□□□□□ -1.38
ABCA13-204ENST00000435803 SYAP1Q96A49 352 aaPredicted RBP6.44□□□□□ -1.38
ABCA13-204ENST00000435803 PHF14O94880 888 aa6.44□□□□□ -1.38
ABCA13-204ENST00000435803 HNRNPUL2Q1KMD3 747 aaKnown RBP6.44□□□□□ -1.38
ABCA13-204ENST00000435803 CHMP4AQ9BY43 222 aa6.44□□□□□ -1.38
ABCA13-204ENST00000435803 TMC1Q8TDI8 760 aa6.44□□□□□ -1.38
ABCA13-204ENST00000435803 GOLGA6L1Q8N7Z2 621 aa6.43□□□□□ -1.38
ABCA13-204ENST00000435803 TONSLQ96HA7 1378 aa6.43□□□□□ -1.38
ABCA13-204ENST00000435803 PTMAP06454 111 aaKnown RBP6.43□□□□□ -1.38
ABCA13-204ENST00000435803 TNNT3P45378 269 aaPredicted RBP6.43□□□□□ -1.38
ABCA13-204ENST00000435803 CHMP4CQ96CF2 233 aa6.43□□□□□ -1.38
ABCA13-204ENST00000435803 BCCIPQ9P287 314 aaKnown RBP eCLIP6.43□□□□□ -1.38
ABCA13-204ENST00000435803 DHX8Q14562 1220 aaKnown RBP6.42□□□□□ -1.38
ABCA13-204ENST00000435803 GBP4Q96PP9 640 aa6.42□□□□□ -1.38
ABCA13-204ENST00000435803 KIAA2012Q0VF49 1180 aa6.42□□□□□ -1.38
ABCA13-204ENST00000435803 ANO8Q9HCE9 1232 aaPredicted RBP6.42□□□□□ -1.38
ABCA13-204ENST00000435803 TCERG1O14776 1098 aaKnown RBP6.42□□□□□ -1.38
ABCA13-204ENST00000435803 SETQ01105 290 aaPredicted RBP6.41□□□□□ -1.38
ABCA13-204ENST00000435803 CSPP1Q1MSJ5 1256 aa6.41□□□□□ -1.38
ABCA13-204ENST00000435803 DNTTIP2Q5QJE6 756 aaKnown RBP6.41□□□□□ -1.38
ABCA13-204ENST00000435803 HNRNPUQ00839 825 aaKnown RBP eCLIP6.41□□□□□ -1.38
ABCA13-204ENST00000435803 LOC105371045A0A1W2PR82 267 aa6.41□□□□□ -1.38
ABCA13-204ENST00000435803 GON4LQ3T8J9 2241 aa6.41□□□□□ -1.38
ABCA13-204ENST00000435803 HTATSF1O43719 755 aaKnown RBP6.41□□□□□ -1.38
ABCA13-204ENST00000435803 CCDC34Q96HJ3 373 aa6.41□□□□□ -1.38
ABCA13-204ENST00000435803 SKOR2Q2VWA4 1001 aaPredicted RBP6.41□□□□□ -1.38
ABCA13-204ENST00000435803 GOLGA6L4A6NEF3 574 aa6.4□□□□□ -1.38
ABCA13-204ENST00000435803 APPP05067 770 aa6.4□□□□□ -1.38
ABCA13-204ENST00000435803 ARID3AQ99856 593 aa6.4□□□□□ -1.38
ABCA13-204ENST00000435803 GPS2Q13227 327 aa6.4□□□□□ -1.39
ABCA13-204ENST00000435803 AAMPQ13685 434 aa6.4□□□□□ -1.39
ABCA13-204ENST00000435803 RRP9O43818 475 aaKnown RBP6.4□□□□□ -1.39
ABCA13-204ENST00000435803 FANCIQ9NVI1 1328 aa6.39□□□□□ -1.39
ABCA13-204ENST00000435803 NBR1Q14596 966 aa6.39□□□□□ -1.39
ABCA13-204ENST00000435803 TEX35Q5T0J7 233 aa6.38□□□□□ -1.39
ABCA13-204ENST00000435803 NOM1Q5C9Z4 860 aaKnown RBP6.38□□□□□ -1.39
ABCA13-204ENST00000435803 NGEFQ8N5V2 710 aa6.38□□□□□ -1.39
ABCA13-204ENST00000435803 TRIM52Q96A61 297 aa6.37□□□□□ -1.39
ABCA13-204ENST00000435803 IL27Q8NEV9 243 aa6.37□□□□□ -1.39
ABCA13-204ENST00000435803 WDR43Q15061 677 aaKnown RBP eCLIP6.37□□□□□ -1.39
ABCA13-204ENST00000435803 PLEKHG5O94827 1062 aa6.36□□□□□ -1.39
ABCA13-204ENST00000435803 EIF4G2P78344 907 aaKnown RBP eCLIP6.36□□□□□ -1.39
ABCA13-204ENST00000435803 KAT6BQ8WYB5 2073 aa6.36□□□□□ -1.39
ABCA13-204ENST00000435803 FAM50AQ14320 339 aaKnown RBP6.36□□□□□ -1.39
ABCA13-204ENST00000435803 PHLDB1Q86UU1 1377 aa6.36□□□□□ -1.39
ABCA13-204ENST00000435803 TSPYL1Q9H0U9 437 aa6.36□□□□□ -1.39
ABCA13-204ENST00000435803 DDX11L8A8MPP1 907 aa6.36□□□□□ -1.39
ABCA13-204ENST00000435803 PDE3BQ13370 1112 aa6.35□□□□□ -1.39
ABCA13-204ENST00000435803 MCCP23508 829 aa6.35□□□□□ -1.39
ABCA13-204ENST00000435803 CCDC66A2RUB6 948 aa6.35□□□□□ -1.39
ABCA13-204ENST00000435803 PLPPR3Q6T4P5 718 aa6.34□□□□□ -1.39
ABCA13-204ENST00000435803 HSCBQ8IWL3 235 aa6.34□□□□□ -1.39
ABCA13-204ENST00000435803 ZMYND15Q9H091 742 aa6.34□□□□□ -1.39
ABCA13-204ENST00000435803 HMGN5P82970 282 aaKnown RBP6.34□□□□□ -1.39
ABCA13-204ENST00000435803 TPM4P67936 248 aa6.34□□□□□ -1.39
ABCA13-204ENST00000435803 FGD1P98174 961 aa6.34□□□□□ -1.39
ABCA13-204ENST00000435803 PABPN1Q86U42 306 aaKnown RBP eCLIP6.34□□□□□ -1.39
ABCA13-204ENST00000435803 MRS2Q9HD23 443 aa6.34□□□□□ -1.39
ABCA13-204ENST00000435803 CAVIN1Q6NZI2 390 aaKnown RBP6.34□□□□□ -1.4
ABCA13-204ENST00000435803 TPRNQ4KMQ1 711 aa6.33□□□□□ -1.4
ABCA13-204ENST00000435803 TAOK2Q9UL54 1235 aa6.33□□□□□ -1.4
ABCA13-204ENST00000435803 CCDC9Q9Y3X0 531 aaKnown RBP6.33□□□□□ -1.4
ABCA13-204ENST00000435803 CWC15Q9P013 229 aaKnown RBP6.33□□□□□ -1.4
ABCA13-204ENST00000435803 HDAC5Q9UQL6 1122 aa6.33□□□□□ -1.4
ABCA13-204ENST00000435803 ITGAEP38570 1179 aa6.33□□□□□ -1.4
ABCA13-204ENST00000435803 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.33□□□□□ -1.4
ABCA13-204ENST00000435803 IPO9Q96P70 1041 aaKnown RBP6.33□□□□□ -1.4
ABCA13-204ENST00000435803 TPM2P07951 284 aa6.33□□□□□ -1.4
ABCA13-204ENST00000435803 RSF1Q96T23 1441 aaPredicted RBP6.31□□□□□ -1.4
ABCA13-204ENST00000435803 RBM19Q9Y4C8 960 aaKnown RBP6.31□□□□□ -1.4
ABCA13-204ENST00000435803 CLGNO14967 610 aa6.31□□□□□ -1.4
ABCA13-204ENST00000435803 TPM3P06753 285 aa6.31□□□□□ -1.4
ABCA13-204ENST00000435803 KLHL34Q8N239 644 aa6.3□□□□□ -1.4
ABCA13-204ENST00000435803 ACBD3Q9H3P7 528 aa6.3□□□□□ -1.4
ABCA13-204ENST00000435803 SLC4A1APQ9BWU0 796 aaKnown RBP6.3□□□□□ -1.4
ABCA13-204ENST00000435803 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
ABCA13-204ENST00000435803 CLSTN1O94985 981 aa6.3□□□□□ -1.4
ABCA13-204ENST00000435803 SUPT16HQ9Y5B9 1047 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms