RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 IGF1RP08069 1367 aa30.87■■■□□ 2.53
CNOT9-204ENST00000432877 KIF27Q86VH2 1401 aa30.84■■■□□ 2.53
CNOT9-204ENST00000432877 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
CNOT9-204ENST00000432877 KIAA0586Q9BVV6 1533 aa30.82■■■□□ 2.52
CNOT9-204ENST00000432877 FAM69CQ0P6D2 419 aa30.81■■■□□ 2.52
CNOT9-204ENST00000432877 ABCC10Q5T3U5 1492 aa30.76■■■□□ 2.52
CNOT9-204ENST00000432877 MAPKBP1O60336 1514 aa30.72■■■□□ 2.51
CNOT9-204ENST00000432877 KIF13AQ9H1H9 1805 aa30.7■■■□□ 2.5
CNOT9-204ENST00000432877 CUL7Q14999 1698 aa30.67■■■□□ 2.5
CNOT9-204ENST00000432877 CARMIL1Q5VZK9 1371 aa30.66■■■□□ 2.5
CNOT9-204ENST00000432877 ADCY10Q96PN6 1610 aa30.62■■■□□ 2.49
CNOT9-204ENST00000432877 PTPRGP23470 1445 aa30.61■■■□□ 2.49
CNOT9-204ENST00000432877 CARMIL2Q6F5E8 1435 aa30.56■■■□□ 2.48
CNOT9-204ENST00000432877 DIP2BQ9P265 1576 aa30.55■■■□□ 2.48
CNOT9-204ENST00000432877 TNIKQ9UKE5 1360 aa30.53■■■□□ 2.48
CNOT9-204ENST00000432877 TTBK1Q5TCY1 1321 aaPredicted RBP30.43■■■□□ 2.46
CNOT9-204ENST00000432877 ABCC2Q92887 1545 aa30.42■■■□□ 2.46
CNOT9-204ENST00000432877 IQGAP2Q13576 1575 aa30.38■■■□□ 2.45
CNOT9-204ENST00000432877 UHRF1BP1LA0JNW5 1464 aa30.38■■■□□ 2.45
CNOT9-204ENST00000432877 PLB1Q6P1J6 1458 aa30.38■■■□□ 2.45
CNOT9-204ENST00000432877 KDM6BO15054 1643 aa30.36■■■□□ 2.45
CNOT9-204ENST00000432877 UACAQ9BZF9 1416 aa30.34■■■□□ 2.45
CNOT9-204ENST00000432877 ASXL2Q76L83 1435 aa30.33■■■□□ 2.45
CNOT9-204ENST00000432877 RAPGEF2Q9Y4G8 1499 aa30.31■■■□□ 2.44
CNOT9-204ENST00000432877 KDM4FA0A1W2PPD8 638 aa30.3■■■□□ 2.44
CNOT9-204ENST00000432877 DISP1Q96F81 1524 aa30.29■■■□□ 2.44
CNOT9-204ENST00000432877 GLI2P10070 1586 aa30.27■■■□□ 2.44
CNOT9-204ENST00000432877 UGGT2Q9NYU1 1516 aa30.24■■■□□ 2.43
CNOT9-204ENST00000432877 TSPOAP1O95153 1857 aa30.23■■■□□ 2.43
CNOT9-204ENST00000432877 KDM5BQ9UGL1 1544 aa30.21■■■□□ 2.43
CNOT9-204ENST00000432877 EPRSP07814 1512 aaKnown RBP30.14■■■□□ 2.42
CNOT9-204ENST00000432877 KIAA0556O60303 1618 aa30.07■■■□□ 2.4
CNOT9-204ENST00000432877 TEX14Q8IWB6 1497 aa30.07■■■□□ 2.4
CNOT9-204ENST00000432877 PPRC1Q5VV67 1664 aaKnown RBP30.05■■■□□ 2.4
CNOT9-204ENST00000432877 GOLGA3Q08378 1498 aa30.03■■■□□ 2.4
CNOT9-204ENST00000432877 COL17A1Q9UMD9 1497 aaPredicted RBP30.01■■■□□ 2.4
CNOT9-204ENST00000432877 ZCCHC11Q5TAX3 1644 aaKnown RBP30■■■□□ 2.39
CNOT9-204ENST00000432877 MAP3K4Q9Y6R4 1608 aa30■■■□□ 2.39
CNOT9-204ENST00000432877 WDR7Q9Y4E6 1490 aa29.99■■■□□ 2.39
CNOT9-204ENST00000432877 FAM9AQ8IZU1 332 aaPredicted RBP29.97■■■□□ 2.39
CNOT9-204ENST00000432877 PRXQ9BXM0 1461 aa29.93■■■□□ 2.38
CNOT9-204ENST00000432877 ADGRL1O94910 1474 aa29.91■■■□□ 2.38
CNOT9-204ENST00000432877 KCNH8Q96L42 1107 aa29.89■■■□□ 2.38
CNOT9-204ENST00000432877 CD109Q6YHK3 1445 aa29.88■■■□□ 2.37
CNOT9-204ENST00000432877 MAGI3Q5TCQ9 1506 aa29.86■■■□□ 2.37
CNOT9-204ENST00000432877 ABCA8O94911 1581 aa29.86■■■□□ 2.37
CNOT9-204ENST00000432877 CTTNBP2Q8WZ74 1663 aa29.85■■■□□ 2.37
CNOT9-204ENST00000432877 CFAP43Q8NDM7 1665 aa29.74■■■□□ 2.35
CNOT9-204ENST00000432877 CSRNP3Q8WYN3 585 aa29.73■■■□□ 2.35
CNOT9-204ENST00000432877 P3H3Q8IVL6 736 aa29.7■■■□□ 2.35
CNOT9-204ENST00000432877 ATP10BO94823 1461 aa29.68■■■□□ 2.34
CNOT9-204ENST00000432877 PHLDB1Q86UU1 1377 aa29.68■■■□□ 2.34
CNOT9-204ENST00000432877 ARAP3Q8WWN8 1544 aa29.64■■■□□ 2.34
CNOT9-204ENST00000432877 ARID3CA6NKF2 412 aa29.63■■■□□ 2.33
CNOT9-204ENST00000432877 ILDR1Q86SU0 546 aaPredicted RBP29.6■■■□□ 2.33
CNOT9-204ENST00000432877 EEA1Q15075 1411 aa29.54■■■□□ 2.32
CNOT9-204ENST00000432877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.54■■■□□ 2.32
CNOT9-204ENST00000432877 HNRNPUL2Q1KMD3 747 aaKnown RBP29.54■■■□□ 2.32
CNOT9-204ENST00000432877 SAMD9Q5K651 1589 aa29.52■■■□□ 2.32
CNOT9-204ENST00000432877 HECW2Q9P2P5 1572 aa29.52■■■□□ 2.32
CNOT9-204ENST00000432877 ABCA9Q8IUA7 1624 aa29.49■■■□□ 2.31
CNOT9-204ENST00000432877 NEO1Q92859 1461 aa29.48■■■□□ 2.31
CNOT9-204ENST00000432877 RAPGEF3O95398 923 aa29.46■■■□□ 2.31
CNOT9-204ENST00000432877 RAPGEF6Q8TEU7 1601 aa29.45■■■□□ 2.31
CNOT9-204ENST00000432877 PLEKHD1A6NEE1 506 aa29.44■■■□□ 2.3
CNOT9-204ENST00000432877 NUP153P49790 1475 aaKnown RBP29.41■■■□□ 2.3
CNOT9-204ENST00000432877 RANGAP1P46060 587 aaPredicted RBP29.39■■■□□ 2.3
CNOT9-204ENST00000432877 KIF21BO75037 1637 aa29.38■■■□□ 2.29
CNOT9-204ENST00000432877 FHOD3Q2V2M9 1422 aa29.36■■■□□ 2.29
CNOT9-204ENST00000432877 PTPRMP28827 1452 aa29.3■■■□□ 2.28
CNOT9-204ENST00000432877 ARID4BQ4LE39 1312 aaPredicted RBP29.3■■■□□ 2.28
CNOT9-204ENST00000432877 DENND4BO75064 1496 aaPredicted RBP29.27■■■□□ 2.28
CNOT9-204ENST00000432877 ADAMTSL3P82987 1691 aa29.26■■■□□ 2.27
CNOT9-204ENST00000432877 AKNAQ7Z591 1439 aa29.26■■■□□ 2.27
CNOT9-204ENST00000432877 EFCAB5A4FU69 1503 aa29.25■■■□□ 2.27
CNOT9-204ENST00000432877 FRMPD1Q5SYB0 1578 aa29.21■■■□□ 2.27
CNOT9-204ENST00000432877 FANCAO15360 1455 aa29.2■■■□□ 2.26
CNOT9-204ENST00000432877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.16■■■□□ 2.26
CNOT9-204ENST00000432877 BCORL1Q5H9F3 1711 aa29.15■■■□□ 2.26
CNOT9-204ENST00000432877 CFAP74Q9C0B2 1584 aa29.13■■■□□ 2.25
CNOT9-204ENST00000432877 POGZQ7Z3K3 1410 aa29.13■■■□□ 2.25
CNOT9-204ENST00000432877 UBTFP17480 764 aaKnown RBP29.12■■■□□ 2.25
CNOT9-204ENST00000432877 FBXO41Q8TF61 875 aa29.12■■■□□ 2.25
CNOT9-204ENST00000432877 MAGI2Q86UL8 1455 aa29.11■■■□□ 2.25
CNOT9-204ENST00000432877 ARHGEF40Q8TER5 1519 aa29.11■■■□□ 2.25
CNOT9-204ENST00000432877 CDK11AQ9UQ88 783 aaPredicted RBP29.11■■■□□ 2.25
CNOT9-204ENST00000432877 PLCH2O75038 1416 aa29.1■■■□□ 2.25
CNOT9-204ENST00000432877 FMN1Q68DA7 1419 aa29.08■■■□□ 2.25
CNOT9-204ENST00000432877 MADDQ8WXG6 1647 aa29.07■■■□□ 2.24
CNOT9-204ENST00000432877 RICTORQ6R327 1708 aa29.06■■■□□ 2.24
CNOT9-204ENST00000432877 ZMYM4Q5VZL5 1548 aa29.05■■■□□ 2.24
CNOT9-204ENST00000432877 EFCAB2Q5VUJ9 269 aa29.05■■■□□ 2.24
CNOT9-204ENST00000432877 ATP1B4Q9UN42 357 aaPredicted RBP29.04■■■□□ 2.24
CNOT9-204ENST00000432877 PCF11O94913 1555 aaKnown RBP29.04■■■□□ 2.24
CNOT9-204ENST00000432877 TTC37Q6PGP7 1564 aa29.04■■■□□ 2.24
CNOT9-204ENST00000432877 SCAPERQ9BY12 1400 aa29.03■■■□□ 2.24
CNOT9-204ENST00000432877 CDK13Q14004 1512 aaKnown RBP29.02■■■□□ 2.24
CNOT9-204ENST00000432877 ZFYVE16Q7Z3T8 1539 aa29.01■■■□□ 2.23
CNOT9-204ENST00000432877 LMTK3Q96Q04 1460 aa29.01■■■□□ 2.23
CNOT9-204ENST00000432877 YEATS2Q9ULM3 1422 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms