RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 WASHC2AQ641Q2 1341 aa6.1□□□□□ -1.43
LRRK2-204ENST00000430804 ANO8Q9HCE9 1232 aaPredicted RBP6.09□□□□□ -1.43
LRRK2-204ENST00000430804 MSH5O43196 834 aa6.09□□□□□ -1.43
LRRK2-204ENST00000430804 CARMIL2Q6F5E8 1435 aa6.09□□□□□ -1.44
LRRK2-204ENST00000430804 NEUROD1Q13562 356 aa6.08□□□□□ -1.44
LRRK2-204ENST00000430804 KLHL34Q8N239 644 aa6.08□□□□□ -1.44
LRRK2-204ENST00000430804 YTHDC1Q96MU7 727 aaKnown RBP6.08□□□□□ -1.44
LRRK2-204ENST00000430804 CSRNP3Q8WYN3 585 aa6.08□□□□□ -1.44
LRRK2-204ENST00000430804 MTUS2Q5JR59 1369 aa6.07□□□□□ -1.44
LRRK2-204ENST00000430804 CDCA8Q53HL2 280 aa6.06□□□□□ -1.44
LRRK2-204ENST00000430804 CECR2Q9BXF3 1484 aa6.06□□□□□ -1.44
LRRK2-204ENST00000430804 PPARGC1BQ86YN6 1023 aaKnown RBP6.05□□□□□ -1.44
LRRK2-204ENST00000430804 RSF1Q96T23 1441 aaPredicted RBP6.05□□□□□ -1.44
LRRK2-204ENST00000430804 DMRT2Q9Y5R5 561 aa6.05□□□□□ -1.44
LRRK2-204ENST00000430804 BAZ1BQ9UIG0 1483 aaKnown RBP6.04□□□□□ -1.44
LRRK2-204ENST00000430804 CFAP53Q96M91 514 aa6.04□□□□□ -1.44
LRRK2-204ENST00000430804 MYH16Q9H6N6 1097 aa6.04□□□□□ -1.44
LRRK2-204ENST00000430804 NACADO15069 1562 aa6.04□□□□□ -1.44
LRRK2-204ENST00000430804 CFDP1Q9UEE9 299 aaPredicted RBP6.04□□□□□ -1.44
LRRK2-204ENST00000430804 SRPK2P78362 688 aaKnown RBP6.04□□□□□ -1.44
LRRK2-204ENST00000430804 EVA1CP58658 441 aa6.03□□□□□ -1.44
LRRK2-204ENST00000430804 CHMP4AQ9BY43 222 aa6.03□□□□□ -1.44
LRRK2-204ENST00000430804 PPP1R1BQ9UD71 204 aaPredicted RBP6.03□□□□□ -1.44
LRRK2-204ENST00000430804 CWC22Q9HCG8 908 aaKnown RBP6.03□□□□□ -1.44
LRRK2-204ENST00000430804 FKBP8Q14318 412 aa6.03□□□□□ -1.44
LRRK2-204ENST00000430804 TMC1Q8TDI8 760 aa6.02□□□□□ -1.45
LRRK2-204ENST00000430804 CLIP1P30622 1438 aa6.02□□□□□ -1.45
LRRK2-204ENST00000430804 EFCAB2Q5VUJ9 269 aa6.02□□□□□ -1.45
LRRK2-204ENST00000430804 GTF2E1P29083 439 aaPredicted RBP6.01□□□□□ -1.45
LRRK2-204ENST00000430804 GGT6Q6P531 493 aa6.01□□□□□ -1.45
LRRK2-204ENST00000430804 PAK3O75914 559 aaPredicted RBP6.01□□□□□ -1.45
LRRK2-204ENST00000430804 FAM69CQ0P6D2 419 aa6□□□□□ -1.45
LRRK2-204ENST00000430804 PNNQ9H307 717 aaKnown RBP6□□□□□ -1.45
LRRK2-204ENST00000430804 ISY1Q9ULR0 285 aaKnown RBP6□□□□□ -1.45
LRRK2-204ENST00000430804 ATF3P18847 181 aa5.99□□□□□ -1.45
LRRK2-204ENST00000430804 WDHD1O75717 1129 aaPredicted RBP5.99□□□□□ -1.45
LRRK2-204ENST00000430804 WDR43Q15061 677 aaKnown RBP eCLIP5.99□□□□□ -1.45
LRRK2-204ENST00000430804 NUDCQ9Y266 331 aa5.99□□□□□ -1.45
LRRK2-204ENST00000430804 ANP32CO43423 234 aa5.99□□□□□ -1.45
LRRK2-204ENST00000430804 CHIC2Q9UKJ5 165 aa5.97□□□□□ -1.45
LRRK2-204ENST00000430804 PPM1GO15355 546 aaPredicted RBP5.97□□□□□ -1.45
LRRK2-204ENST00000430804 TULP1O00294 542 aaPredicted RBP5.96□□□□□ -1.45
LRRK2-204ENST00000430804 KDM2AQ9Y2K7 1162 aa5.96□□□□□ -1.45
LRRK2-204ENST00000430804 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.96□□□□□ -1.46
LRRK2-204ENST00000430804 CTDP1Q9Y5B0 961 aaPredicted RBP5.95□□□□□ -1.46
LRRK2-204ENST00000430804 TONSLQ96HA7 1378 aa5.95□□□□□ -1.46
LRRK2-204ENST00000430804 POGZQ7Z3K3 1410 aa5.95□□□□□ -1.46
LRRK2-204ENST00000430804 EIF5BO60841 1220 aaKnown RBP5.95□□□□□ -1.46
LRRK2-204ENST00000430804 CLSTN1O94985 981 aa5.95□□□□□ -1.46
LRRK2-204ENST00000430804 NGDNQ8NEJ9 315 aaKnown RBP5.94□□□□□ -1.46
LRRK2-204ENST00000430804 HDGFL2Q7Z4V5 671 aaPredicted RBP5.94□□□□□ -1.46
LRRK2-204ENST00000430804 MAPK8IP3Q9UPT6 1336 aa5.94□□□□□ -1.46
LRRK2-204ENST00000430804 ZNF330Q9Y3S2 320 aaPredicted RBP5.93□□□□□ -1.46
LRRK2-204ENST00000430804 HSP90AA1P07900 732 aaKnown RBP5.93□□□□□ -1.46
LRRK2-204ENST00000430804 C16orf71Q8IYS4 520 aaPredicted RBP5.93□□□□□ -1.46
LRRK2-204ENST00000430804 RTF1Q92541 710 aaKnown RBP5.93□□□□□ -1.46
LRRK2-204ENST00000430804 PIP4K2BP78356 416 aa5.93□□□□□ -1.46
LRRK2-204ENST00000430804 CCNB3Q8WWL7 1395 aa5.93□□□□□ -1.46
LRRK2-204ENST00000430804 CCDC180Q9P1Z9 1646 aa5.92□□□□□ -1.46
LRRK2-204ENST00000430804 KIF27Q86VH2 1401 aa5.92□□□□□ -1.46
LRRK2-204ENST00000430804 UPF2Q9HAU5 1272 aaKnown RBP5.92□□□□□ -1.46
LRRK2-204ENST00000430804 TRIM26Q12899 539 aaPredicted RBP5.92□□□□□ -1.46
LRRK2-204ENST00000430804 CHMP4BQ9H444 224 aaKnown RBP5.92□□□□□ -1.46
LRRK2-204ENST00000430804 WASHC2CQ9Y4E1 1318 aa5.92□□□□□ -1.46
LRRK2-204ENST00000430804 ANP32EQ9BTT0 268 aa5.92□□□□□ -1.46
LRRK2-204ENST00000430804 TRIM34Q9BYJ4 488 aa5.92□□□□□ -1.46
LRRK2-204ENST00000430804 HDAC5Q9UQL6 1122 aa5.92□□□□□ -1.46
LRRK2-204ENST00000430804 CNKSR2Q8WXI2 1034 aa5.91□□□□□ -1.46
LRRK2-204ENST00000430804 CCAR1Q8IX12 1150 aaKnown RBP5.91□□□□□ -1.46
LRRK2-204ENST00000430804 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.91□□□□□ -1.46
LRRK2-204ENST00000430804 NUTM2BA6NNL0 878 aaPredicted RBP5.91□□□□□ -1.46
LRRK2-204ENST00000430804 NUTM2EB1AL46 878 aaPredicted RBP5.91□□□□□ -1.46
LRRK2-204ENST00000430804 NCBP3Q53F19 620 aaKnown RBP5.91□□□□□ -1.46
LRRK2-204ENST00000430804 NUTM2DQ5VT03 806 aaPredicted RBP5.91□□□□□ -1.46
LRRK2-204ENST00000430804 NUTM2AQ8IVF1 878 aaPredicted RBP5.91□□□□□ -1.46
LRRK2-204ENST00000430804 OS9Q13438 667 aaPredicted RBP5.91□□□□□ -1.46
LRRK2-204ENST00000430804 RGL3Q3MIN7 710 aa5.9□□□□□ -1.46
LRRK2-204ENST00000430804 EIF4G1Q04637 1599 aaKnown RBP5.9□□□□□ -1.47
LRRK2-204ENST00000430804 CFAP44Q96MT7 982 aa5.9□□□□□ -1.47
LRRK2-204ENST00000430804 WRNQ14191 1432 aaPredicted RBP eCLIP5.9□□□□□ -1.47
LRRK2-204ENST00000430804 TAF7LQ5H9L4 462 aa5.89□□□□□ -1.47
LRRK2-204ENST00000430804 RSPH4AQ5TD94 716 aa5.89□□□□□ -1.47
LRRK2-204ENST00000430804 SOX12O15370 315 aa5.89□□□□□ -1.47
LRRK2-204ENST00000430804 PSME1Q06323 249 aa5.89□□□□□ -1.47
LRRK2-204ENST00000430804 FRAT2O75474 233 aaPredicted RBP5.89□□□□□ -1.47
LRRK2-204ENST00000430804 NOL10Q9BSC4 688 aaKnown RBP5.89□□□□□ -1.47
LRRK2-204ENST00000430804 MAP3K9P80192 1104 aa5.88□□□□□ -1.47
LRRK2-204ENST00000430804 TOM1O60784 492 aa5.88□□□□□ -1.47
LRRK2-204ENST00000430804 KNSTRNQ9Y448 316 aa5.88□□□□□ -1.47
LRRK2-204ENST00000430804 ZNF710Q8N1W2 664 aa5.88□□□□□ -1.47
LRRK2-204ENST00000430804 PAXIP1Q6ZW49 1069 aaPredicted RBP5.88□□□□□ -1.47
LRRK2-204ENST00000430804 ZRSR1Q15695 479 aaKnown RBP5.88□□□□□ -1.47
LRRK2-204ENST00000430804 SPAG9O60271 1321 aaKnown RBP5.88□□□□□ -1.47
LRRK2-204ENST00000430804 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.87□□□□□ -1.47
LRRK2-204ENST00000430804 PROSER2Q86WR7 435 aaPredicted RBP5.87□□□□□ -1.47
LRRK2-204ENST00000430804 CASC1Q6TDU7 716 aa5.87□□□□□ -1.47
LRRK2-204ENST00000430804 PRM3Q9NNZ6 103 aa5.87□□□□□ -1.47
LRRK2-204ENST00000430804 ANP32BQ92688 251 aaKnown RBP5.86□□□□□ -1.47
LRRK2-204ENST00000430804 KIF3BO15066 747 aa5.86□□□□□ -1.47
LRRK2-204ENST00000430804 PDE3BQ13370 1112 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms