RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 TRIM41Q8WV44 630 aa10.25□□□□□ -0.77
LINC00649-203ENST00000427447 BECN1Q14457 450 aa10.25□□□□□ -0.77
LINC00649-203ENST00000427447 TPRNQ4KMQ1 711 aa10.24□□□□□ -0.77
LINC00649-203ENST00000427447 TAF3Q5VWG9 929 aa10.23□□□□□ -0.77
LINC00649-203ENST00000427447 ANP32CO43423 234 aa10.23□□□□□ -0.77
LINC00649-203ENST00000427447 MSNP26038 577 aaKnown RBP10.23□□□□□ -0.77
LINC00649-203ENST00000427447 ZBTB7CA1YPR0 619 aa10.22□□□□□ -0.77
LINC00649-203ENST00000427447 NOM1Q5C9Z4 860 aaKnown RBP10.19□□□□□ -0.78
LINC00649-203ENST00000427447 MTERF4Q7Z6M4 381 aaKnown RBP10.17□□□□□ -0.78
LINC00649-203ENST00000427447 GOLGA6L4A6NEF3 574 aa10.17□□□□□ -0.78
LINC00649-203ENST00000427447 DEKP35659 375 aaKnown RBP10.16□□□□□ -0.78
LINC00649-203ENST00000427447 RTN4Q9NQC3 1192 aaKnown RBP10.16□□□□□ -0.78
LINC00649-203ENST00000427447 PDIA4P13667 645 aaKnown RBP10.16□□□□□ -0.78
LINC00649-203ENST00000427447 PSMD1Q99460 953 aa10.16□□□□□ -0.78
LINC00649-203ENST00000427447 ARID3AQ99856 593 aa10.16□□□□□ -0.78
LINC00649-203ENST00000427447 MAP7D2Q96T17 732 aa10.15□□□□□ -0.78
LINC00649-203ENST00000427447 SSR1P43307 286 aaKnown RBP10.14□□□□□ -0.79
LINC00649-203ENST00000427447 LMOD2Q6P5Q4 547 aa10.13□□□□□ -0.79
LINC00649-203ENST00000427447 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.13□□□□□ -0.79
LINC00649-203ENST00000427447 CCDC180Q9P1Z9 1646 aa10.11□□□□□ -0.79
LINC00649-203ENST00000427447 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.11□□□□□ -0.79
LINC00649-203ENST00000427447 NEUROD1Q13562 356 aa10.1□□□□□ -0.79
LINC00649-203ENST00000427447 CCDC66A2RUB6 948 aa10.1□□□□□ -0.79
LINC00649-203ENST00000427447 FBXO3Q9UK99 471 aa10.08□□□□□ -0.8
LINC00649-203ENST00000427447 BRD2P25440 801 aaKnown RBP10.07□□□□□ -0.8
LINC00649-203ENST00000427447 ZRSR1Q15695 479 aaKnown RBP10.07□□□□□ -0.8
LINC00649-203ENST00000427447 CC2D1BQ5T0F9 858 aaKnown RBP10.07□□□□□ -0.8
LINC00649-203ENST00000427447 CHMP3Q9Y3E7 222 aa10.05□□□□□ -0.8
LINC00649-203ENST00000427447 GPS2Q13227 327 aa10.04□□□□□ -0.8
LINC00649-203ENST00000427447 NOP58Q9Y2X3 529 aaKnown RBP10.04□□□□□ -0.8
LINC00649-203ENST00000427447 HTATSF1O43719 755 aaKnown RBP10.04□□□□□ -0.8
LINC00649-203ENST00000427447 KIAA2012Q0VF49 1180 aa10.04□□□□□ -0.8
LINC00649-203ENST00000427447 WDR43Q15061 677 aaKnown RBP eCLIP10.03□□□□□ -0.8
LINC00649-203ENST00000427447 TEX35Q5T0J7 233 aa10.03□□□□□ -0.8
LINC00649-203ENST00000427447 FKBP8Q14318 412 aa10.02□□□□□ -0.8
LINC00649-203ENST00000427447 TSPYL1Q9H0U9 437 aa10.02□□□□□ -0.8
LINC00649-203ENST00000427447 TMX4Q9H1E5 349 aaPredicted RBP10.02□□□□□ -0.81
LINC00649-203ENST00000427447 CWC15Q9P013 229 aaKnown RBP10.02□□□□□ -0.81
LINC00649-203ENST00000427447 ZNF771Q7L3S4 317 aaPredicted RBP10.02□□□□□ -0.81
LINC00649-203ENST00000427447 SLC4A1APQ9BWU0 796 aaKnown RBP10□□□□□ -0.81
LINC00649-203ENST00000427447 UBE2Q2Q8WVN8 375 aa10□□□□□ -0.81
LINC00649-203ENST00000427447 CLSTN1O94985 981 aa9.99□□□□□ -0.81
LINC00649-203ENST00000427447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
LINC00649-203ENST00000427447 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
LINC00649-203ENST00000427447 SCAF1Q9H7N4 1312 aaKnown RBP9.99□□□□□ -0.81
LINC00649-203ENST00000427447 PAIP2Q9BPZ3 127 aaKnown RBP9.99□□□□□ -0.81
LINC00649-203ENST00000427447 RRP12Q5JTH9 1297 aaKnown RBP9.99□□□□□ -0.81
LINC00649-203ENST00000427447 PLCD4Q9BRC7 762 aa9.99□□□□□ -0.81
LINC00649-203ENST00000427447 RDXP35241 583 aaKnown RBP9.99□□□□□ -0.81
LINC00649-203ENST00000427447 HMMRO75330 724 aa9.98□□□□□ -0.81
LINC00649-203ENST00000427447 CCDC136Q96JN2 1154 aa9.98□□□□□ -0.81
LINC00649-203ENST00000427447 PES1O00541 588 aaKnown RBP9.98□□□□□ -0.81
LINC00649-203ENST00000427447 USP8P40818 1118 aa9.97□□□□□ -0.81
LINC00649-203ENST00000427447 AXDND1Q5T1B0 1012 aaPredicted RBP9.97□□□□□ -0.81
LINC00649-203ENST00000427447 SETSIPP0DME0 302 aa9.96□□□□□ -0.82
LINC00649-203ENST00000427447 DYDC1Q8WWB3 177 aa9.95□□□□□ -0.82
LINC00649-203ENST00000427447 OS9Q13438 667 aaPredicted RBP9.94□□□□□ -0.82
LINC00649-203ENST00000427447 CCDC191Q8NCU4 936 aa9.94□□□□□ -0.82
LINC00649-203ENST00000427447 NOC3LQ8WTT2 800 aaKnown RBP9.94□□□□□ -0.82
LINC00649-203ENST00000427447 ITGAEP38570 1179 aa9.93□□□□□ -0.82
LINC00649-203ENST00000427447 DEF6Q9H4E7 631 aa9.93□□□□□ -0.82
LINC00649-203ENST00000427447 CLGNO14967 610 aa9.92□□□□□ -0.82
LINC00649-203ENST00000427447 CHIC1Q5VXU3 224 aa9.92□□□□□ -0.82
LINC00649-203ENST00000427447 RRP9O43818 475 aaKnown RBP9.91□□□□□ -0.82
LINC00649-203ENST00000427447 TMCO5BA8MYB1 307 aa9.9□□□□□ -0.82
LINC00649-203ENST00000427447 HMGN5P82970 282 aaKnown RBP9.9□□□□□ -0.82
LINC00649-203ENST00000427447 PPARGC1BQ86YN6 1023 aaKnown RBP9.9□□□□□ -0.82
LINC00649-203ENST00000427447 INCENPQ9NQS7 918 aa9.88□□□□□ -0.83
LINC00649-203ENST00000427447 RBM28Q9NW13 759 aaKnown RBP9.88□□□□□ -0.83
LINC00649-203ENST00000427447 DCAF1Q9Y4B6 1507 aa9.88□□□□□ -0.83
LINC00649-203ENST00000427447 BCCIPQ9P287 314 aaKnown RBP eCLIP9.88□□□□□ -0.83
LINC00649-203ENST00000427447 PHF14O94880 888 aa9.87□□□□□ -0.83
LINC00649-203ENST00000427447 NEXNQ0ZGT2 675 aa9.87□□□□□ -0.83
LINC00649-203ENST00000427447 IRX3P78415 501 aaPredicted RBP9.87□□□□□ -0.83
LINC00649-203ENST00000427447 GOLGA6L10A6NI86 522 aa9.85□□□□□ -0.83
LINC00649-203ENST00000427447 CSPP1Q1MSJ5 1256 aa9.85□□□□□ -0.83
LINC00649-203ENST00000427447 CSRNP3Q8WYN3 585 aa9.85□□□□□ -0.83
LINC00649-203ENST00000427447 HIRIP3Q9BW71 556 aaPredicted RBP9.85□□□□□ -0.83
LINC00649-203ENST00000427447 TPM2P07951 284 aa9.84□□□□□ -0.83
LINC00649-203ENST00000427447 TAOK2Q9UL54 1235 aa9.84□□□□□ -0.83
LINC00649-203ENST00000427447 KAT6BQ8WYB5 2073 aa9.83□□□□□ -0.84
LINC00649-203ENST00000427447 GOLGA6L19H0YKK7 550 aa9.83□□□□□ -0.84
LINC00649-203ENST00000427447 CALD1Q05682 793 aaKnown RBP9.83□□□□□ -0.84
LINC00649-203ENST00000427447 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.82□□□□□ -0.84
LINC00649-203ENST00000427447 DCTN1Q14203 1278 aa9.81□□□□□ -0.84
LINC00649-203ENST00000427447 SYAP1Q96A49 352 aaPredicted RBP9.8□□□□□ -0.84
LINC00649-203ENST00000427447 PAF1Q8N7H5 531 aa9.8□□□□□ -0.84
LINC00649-203ENST00000427447 CAGE1Q8TC20 777 aa9.79□□□□□ -0.84
LINC00649-203ENST00000427447 MYH16Q9H6N6 1097 aa9.79□□□□□ -0.84
LINC00649-203ENST00000427447 GOLGA6L10A0A0M3HER8 536 aa9.79□□□□□ -0.84
LINC00649-203ENST00000427447 ACBD3Q9H3P7 528 aa9.79□□□□□ -0.84
LINC00649-203ENST00000427447 ZRSR2Q15696 482 aaKnown RBP9.79□□□□□ -0.84
LINC00649-203ENST00000427447 DRC7Q8IY82 874 aa9.78□□□□□ -0.84
LINC00649-203ENST00000427447 MNS1Q8NEH6 495 aa9.78□□□□□ -0.84
LINC00649-203ENST00000427447 CDR1P51861 262 aa9.78□□□□□ -0.84
LINC00649-203ENST00000427447 SUDS3Q9H7L9 328 aaPredicted RBP9.78□□□□□ -0.84
LINC00649-203ENST00000427447 H0YHG0 523 aa9.77□□□□□ -0.85
LINC00649-203ENST00000427447 FYB1O15117 783 aa9.77□□□□□ -0.85
LINC00649-203ENST00000427447 WWC1Q8IX03 1113 aa9.77□□□□□ -0.85
LINC00649-203ENST00000427447 WDR78Q5VTH9 848 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms