RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 FAM69CQ0P6D2 419 aa26.14■■□□□ 1.78
PDAP1-202ENST00000426447 KIF13AQ9H1H9 1805 aa26.06■■□□□ 1.76
PDAP1-202ENST00000426447 ABCC10Q5T3U5 1492 aa26.01■■□□□ 1.75
PDAP1-202ENST00000426447 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.74
PDAP1-202ENST00000426447 MAPKBP1O60336 1514 aa25.92■■□□□ 1.74
PDAP1-202ENST00000426447 KIAA0586Q9BVV6 1533 aa25.88■■□□□ 1.73
PDAP1-202ENST00000426447 ADCY10Q96PN6 1610 aa25.87■■□□□ 1.73
PDAP1-202ENST00000426447 DIP2BQ9P265 1576 aa25.86■■□□□ 1.73
PDAP1-202ENST00000426447 IGF1RP08069 1367 aa25.86■■□□□ 1.73
PDAP1-202ENST00000426447 TTBK1Q5TCY1 1321 aaPredicted RBP25.86■■□□□ 1.73
PDAP1-202ENST00000426447 KIF27Q86VH2 1401 aa25.82■■□□□ 1.72
PDAP1-202ENST00000426447 KDM4FA0A1W2PPD8 638 aa25.81■■□□□ 1.72
PDAP1-202ENST00000426447 PTPRGP23470 1445 aa25.8■■□□□ 1.72
PDAP1-202ENST00000426447 KDM6BO15054 1643 aa25.79■■□□□ 1.72
PDAP1-202ENST00000426447 TSPOAP1O95153 1857 aa25.72■■□□□ 1.71
PDAP1-202ENST00000426447 CUL7Q14999 1698 aa25.72■■□□□ 1.71
PDAP1-202ENST00000426447 CARMIL2Q6F5E8 1435 aa25.71■■□□□ 1.71
PDAP1-202ENST00000426447 CARMIL1Q5VZK9 1371 aa25.7■■□□□ 1.71
PDAP1-202ENST00000426447 TNIKQ9UKE5 1360 aa25.69■■□□□ 1.7
PDAP1-202ENST00000426447 ABCC2Q92887 1545 aa25.63■■□□□ 1.69
PDAP1-202ENST00000426447 ASXL2Q76L83 1435 aa25.62■■□□□ 1.69
PDAP1-202ENST00000426447 PLB1Q6P1J6 1458 aa25.6■■□□□ 1.69
PDAP1-202ENST00000426447 UACAQ9BZF9 1416 aa25.54■■□□□ 1.68
PDAP1-202ENST00000426447 IQGAP2Q13576 1575 aa25.53■■□□□ 1.68
PDAP1-202ENST00000426447 UHRF1BP1LA0JNW5 1464 aa25.52■■□□□ 1.68
PDAP1-202ENST00000426447 GLI2P10070 1586 aa25.51■■□□□ 1.67
PDAP1-202ENST00000426447 ILDR1Q86SU0 546 aaPredicted RBP25.48■■□□□ 1.67
PDAP1-202ENST00000426447 DISP1Q96F81 1524 aa25.44■■□□□ 1.66
PDAP1-202ENST00000426447 ADGRL1O94910 1474 aa25.44■■□□□ 1.66
PDAP1-202ENST00000426447 EPRSP07814 1512 aaKnown RBP25.42■■□□□ 1.66
PDAP1-202ENST00000426447 PPRC1Q5VV67 1664 aaKnown RBP25.42■■□□□ 1.66
PDAP1-202ENST00000426447 KDM5BQ9UGL1 1544 aa25.41■■□□□ 1.66
PDAP1-202ENST00000426447 COL17A1Q9UMD9 1497 aaPredicted RBP25.4■■□□□ 1.66
PDAP1-202ENST00000426447 TEX14Q8IWB6 1497 aa25.4■■□□□ 1.66
PDAP1-202ENST00000426447 RAPGEF2Q9Y4G8 1499 aa25.39■■□□□ 1.65
PDAP1-202ENST00000426447 UGGT2Q9NYU1 1516 aa25.35■■□□□ 1.65
PDAP1-202ENST00000426447 MAP3K4Q9Y6R4 1608 aa25.33■■□□□ 1.65
PDAP1-202ENST00000426447 ZCCHC11Q5TAX3 1644 aaKnown RBP25.32■■□□□ 1.64
PDAP1-202ENST00000426447 KCNH8Q96L42 1107 aa25.3■■□□□ 1.64
PDAP1-202ENST00000426447 KIAA0556O60303 1618 aa25.29■■□□□ 1.64
PDAP1-202ENST00000426447 WDR7Q9Y4E6 1490 aa25.28■■□□□ 1.64
PDAP1-202ENST00000426447 CD109Q6YHK3 1445 aa25.22■■□□□ 1.63
PDAP1-202ENST00000426447 HECW2Q9P2P5 1572 aa25.19■■□□□ 1.62
PDAP1-202ENST00000426447 FAM9AQ8IZU1 332 aaPredicted RBP25.19■■□□□ 1.62
PDAP1-202ENST00000426447 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
PDAP1-202ENST00000426447 MAGI3Q5TCQ9 1506 aa25.15■■□□□ 1.62
PDAP1-202ENST00000426447 ARID3CA6NKF2 412 aa25.09■■□□□ 1.61
PDAP1-202ENST00000426447 CFAP43Q8NDM7 1665 aa25.09■■□□□ 1.61
PDAP1-202ENST00000426447 ABCA8O94911 1581 aa25.09■■□□□ 1.61
PDAP1-202ENST00000426447 CTTNBP2Q8WZ74 1663 aa25.07■■□□□ 1.6
PDAP1-202ENST00000426447 P3H3Q8IVL6 736 aa25.05■■□□□ 1.6
PDAP1-202ENST00000426447 PRXQ9BXM0 1461 aa24.97■■□□□ 1.59
PDAP1-202ENST00000426447 ARAP3Q8WWN8 1544 aa24.96■■□□□ 1.59
PDAP1-202ENST00000426447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.96■■□□□ 1.59
PDAP1-202ENST00000426447 HNRNPUL2Q1KMD3 747 aaKnown RBP24.96■■□□□ 1.59
PDAP1-202ENST00000426447 KIF21BO75037 1637 aa24.95■■□□□ 1.58
PDAP1-202ENST00000426447 ATP10BO94823 1461 aa24.95■■□□□ 1.58
PDAP1-202ENST00000426447 PHLDB1Q86UU1 1377 aa24.93■■□□□ 1.58
PDAP1-202ENST00000426447 RAPGEF3O95398 923 aa24.92■■□□□ 1.58
PDAP1-202ENST00000426447 ARID4BQ4LE39 1312 aaPredicted RBP24.89■■□□□ 1.58
PDAP1-202ENST00000426447 FBXO41Q8TF61 875 aa24.88■■□□□ 1.57
PDAP1-202ENST00000426447 PTPRMP28827 1452 aa24.84■■□□□ 1.57
PDAP1-202ENST00000426447 ABCA9Q8IUA7 1624 aa24.83■■□□□ 1.56
PDAP1-202ENST00000426447 RANGAP1P46060 587 aaPredicted RBP24.82■■□□□ 1.56
PDAP1-202ENST00000426447 CSRNP3Q8WYN3 585 aa24.82■■□□□ 1.56
PDAP1-202ENST00000426447 NEO1Q92859 1461 aa24.81■■□□□ 1.56
PDAP1-202ENST00000426447 ADAMTSL3P82987 1691 aa24.76■■□□□ 1.55
PDAP1-202ENST00000426447 PLEKHD1A6NEE1 506 aa24.76■■□□□ 1.55
PDAP1-202ENST00000426447 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
PDAP1-202ENST00000426447 SAMD9Q5K651 1589 aa24.71■■□□□ 1.55
PDAP1-202ENST00000426447 PLPPR3Q6T4P5 718 aa24.7■■□□□ 1.54
PDAP1-202ENST00000426447 NUP153P49790 1475 aaKnown RBP24.68■■□□□ 1.54
PDAP1-202ENST00000426447 BCORL1Q5H9F3 1711 aa24.67■■□□□ 1.54
PDAP1-202ENST00000426447 DENND4BO75064 1496 aaPredicted RBP24.67■■□□□ 1.54
PDAP1-202ENST00000426447 MADDQ8WXG6 1647 aa24.65■■□□□ 1.54
PDAP1-202ENST00000426447 FRMPD1Q5SYB0 1578 aa24.65■■□□□ 1.54
PDAP1-202ENST00000426447 PCF11O94913 1555 aaKnown RBP24.64■■□□□ 1.54
PDAP1-202ENST00000426447 FHOD3Q2V2M9 1422 aa24.64■■□□□ 1.54
PDAP1-202ENST00000426447 AKNAQ7Z591 1439 aa24.64■■□□□ 1.54
PDAP1-202ENST00000426447 LMTK3Q96Q04 1460 aa24.62■■□□□ 1.53
PDAP1-202ENST00000426447 HSPA2P54652 639 aa24.61■■□□□ 1.53
PDAP1-202ENST00000426447 FANCAO15360 1455 aa24.6■■□□□ 1.53
PDAP1-202ENST00000426447 POGZQ7Z3K3 1410 aa24.6■■□□□ 1.53
PDAP1-202ENST00000426447 MLECQ14165 292 aa24.58■■□□□ 1.53
PDAP1-202ENST00000426447 RIMS1Q86UR5 1692 aaKnown RBP24.56■■□□□ 1.52
PDAP1-202ENST00000426447 ARHGEF40Q8TER5 1519 aa24.56■■□□□ 1.52
PDAP1-202ENST00000426447 EEA1Q15075 1411 aa24.53■■□□□ 1.52
PDAP1-202ENST00000426447 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.53■■□□□ 1.523e-7■■□□□ 12.7
PDAP1-202ENST00000426447 CFAP74Q9C0B2 1584 aa24.52■■□□□ 1.52
PDAP1-202ENST00000426447 RICTORQ6R327 1708 aa24.52■■□□□ 1.52
PDAP1-202ENST00000426447 ATP1B4Q9UN42 357 aaPredicted RBP24.51■■□□□ 1.51
PDAP1-202ENST00000426447 YEATS2Q9ULM3 1422 aa24.5■■□□□ 1.51
PDAP1-202ENST00000426447 ZFYVE16Q7Z3T8 1539 aa24.49■■□□□ 1.51
PDAP1-202ENST00000426447 EFCAB5A4FU69 1503 aa24.47■■□□□ 1.51
PDAP1-202ENST00000426447 MAGI2Q86UL8 1455 aa24.47■■□□□ 1.51
PDAP1-202ENST00000426447 SCAPERQ9BY12 1400 aa24.46■■□□□ 1.51
PDAP1-202ENST00000426447 CERKQ8TCT0 537 aa24.46■■□□□ 1.51
PDAP1-202ENST00000426447 ZMYM4Q5VZL5 1548 aa24.45■■□□□ 1.51
PDAP1-202ENST00000426447 TTC37Q6PGP7 1564 aa24.45■■□□□ 1.5
PDAP1-202ENST00000426447 PLCH2O75038 1416 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms