RNA–Protein interactions for RNA: ENST00000424998.3

CNKSR3-201, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-201ENST00000424998 SCRIBQ14160 1630 aa7.27□□□□□ -1.25
CNKSR3-201ENST00000424998 RGL2O15211 777 aa7.27□□□□□ -1.25
CNKSR3-201ENST00000424998 NPM1P06748 294 aaKnown RBP eCLIP7.27□□□□□ -1.25
CNKSR3-201ENST00000424998 NUBP1P53384 320 aa7.27□□□□□ -1.25
CNKSR3-201ENST00000424998 FAM212AQ96EL1 285 aa7.27□□□□□ -1.25
CNKSR3-201ENST00000424998 MNX1P50219 401 aaPredicted RBP7.25□□□□□ -1.25
CNKSR3-201ENST00000424998 TRIM41Q8WV44 630 aa7.25□□□□□ -1.25
CNKSR3-201ENST00000424998 PRKAR2AP13861 404 aaKnown RBP7.23□□□□□ -1.25
CNKSR3-201ENST00000424998 RASEFQ8IZ41 740 aa7.23□□□□□ -1.25
CNKSR3-201ENST00000424998 MYO15BQ96JP2 1530 aa7.22□□□□□ -1.25
CNKSR3-201ENST00000424998 SHROOM4Q9ULL8 1493 aa7.22□□□□□ -1.25
CNKSR3-201ENST00000424998 CHRDL2Q6WN34 429 aa7.21□□□□□ -1.26
CNKSR3-201ENST00000424998 CUX2O14529 1486 aa7.2□□□□□ -1.26
CNKSR3-201ENST00000424998 CHGAP10645 457 aaKnown RBP7.2□□□□□ -1.26
CNKSR3-201ENST00000424998 TSPYL2Q9H2G4 693 aaPredicted RBP7.2□□□□□ -1.26
CNKSR3-201ENST00000424998 FARP1Q9Y4F1 1045 aaPredicted RBP7.2□□□□□ -1.26
CNKSR3-201ENST00000424998 PLCB2Q00722 1185 aa7.19□□□□□ -1.26
CNKSR3-201ENST00000424998 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.19□□□□□ -1.26
CNKSR3-201ENST00000424998 PYGBP11216 843 aa7.18□□□□□ -1.26
CNKSR3-201ENST00000424998 FXR2P51116 673 aaKnown RBP eCLIP7.17□□□□□ -1.26
CNKSR3-201ENST00000424998 HAP1P54257 671 aaPredicted RBP7.17□□□□□ -1.26
CNKSR3-201ENST00000424998 BBXQ8WY36 941 aaPredicted RBP7.16□□□□□ -1.26
CNKSR3-201ENST00000424998 CFAP44Q96MT7 982 aa7.16□□□□□ -1.26
CNKSR3-201ENST00000424998 ERCC6Q03468 1493 aa7.16□□□□□ -1.26
CNKSR3-201ENST00000424998 PIP4P2Q8N4L2 257 aa7.15□□□□□ -1.26
CNKSR3-201ENST00000424998 RNF25Q96BH1 459 aaPredicted RBP7.15□□□□□ -1.26
CNKSR3-201ENST00000424998 RIOK3O14730 519 aaKnown RBP7.14□□□□□ -1.27
CNKSR3-201ENST00000424998 PAXIP1Q6ZW49 1069 aaPredicted RBP7.14□□□□□ -1.27
CNKSR3-201ENST00000424998 TAOK2Q9UL54 1235 aa7.14□□□□□ -1.27
CNKSR3-201ENST00000424998 PAK3O75914 559 aaPredicted RBP7.13□□□□□ -1.27
CNKSR3-201ENST00000424998 ZCCHC6Q5VYS8 1495 aaKnown RBP7.11□□□□□ -1.27
CNKSR3-201ENST00000424998 STK25O00506 426 aa7.1□□□□□ -1.27
CNKSR3-201ENST00000424998 CHRM1P11229 460 aaPredicted RBP7.1□□□□□ -1.27
CNKSR3-201ENST00000424998 NESP48681 1621 aa7.09□□□□□ -1.27
CNKSR3-201ENST00000424998 VGFO15240 615 aaPredicted RBP7.09□□□□□ -1.27
CNKSR3-201ENST00000424998 HS6ST3Q8IZP7 471 aa7.09□□□□□ -1.27
CNKSR3-201ENST00000424998 SPRYD3Q8NCJ5 442 aa7.09□□□□□ -1.27
CNKSR3-201ENST00000424998 STK24Q9Y6E0 443 aa7.07□□□□□ -1.28
CNKSR3-201ENST00000424998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.06□□□□□ -1.28
CNKSR3-201ENST00000424998 ZFP91Q96JP5 570 aaPredicted RBP7.06□□□□□ -1.28
CNKSR3-201ENST00000424998 ZNF467Q7Z7K2 595 aaPredicted RBP7.05□□□□□ -1.28
CNKSR3-201ENST00000424998 CCDC61Q9Y6R9 512 aa7.05□□□□□ -1.28
CNKSR3-201ENST00000424998 CD44P16070 742 aaKnown RBP7.04□□□□□ -1.28
CNKSR3-201ENST00000424998 BCL11BQ9C0K0 894 aaPredicted RBP7.04□□□□□ -1.28
CNKSR3-201ENST00000424998 ZRANB1Q9UGI0 708 aa7.04□□□□□ -1.28
CNKSR3-201ENST00000424998 PCDHB8Q9UN66 801 aa7.04□□□□□ -1.28
CNKSR3-201ENST00000424998 PCDHB13Q9Y5F0 798 aa7.04□□□□□ -1.28
CNKSR3-201ENST00000424998 THOC2Q8NI27 1593 aaKnown RBP7.03□□□□□ -1.28
CNKSR3-201ENST00000424998 DCAF1Q9Y4B6 1507 aa7.03□□□□□ -1.28
CNKSR3-201ENST00000424998 SMARCA2P51531 1590 aa7□□□□□ -1.29
CNKSR3-201ENST00000424998 MAP3K13O43283 966 aa7□□□□□ -1.29
CNKSR3-201ENST00000424998 PDAP1Q13442 181 aaKnown RBP7□□□□□ -1.29
CNKSR3-201ENST00000424998 SGIP1Q9BQI5 828 aa6.99□□□□□ -1.29
CNKSR3-201ENST00000424998 PSEN1P49768 467 aa6.98□□□□□ -1.29
CNKSR3-201ENST00000424998 NKX1-1Q15270 411 aaPredicted RBP6.98□□□□□ -1.29
CNKSR3-201ENST00000424998 VSIG10Q8N0Z9 540 aa6.98□□□□□ -1.29
CNKSR3-201ENST00000424998 ZNF579Q8NAF0 562 aaKnown RBP6.98□□□□□ -1.29
CNKSR3-201ENST00000424998 KIF12Q96FN5 646 aa6.98□□□□□ -1.29
CNKSR3-201ENST00000424998 PHF12Q96QT6 1004 aa6.98□□□□□ -1.29
CNKSR3-201ENST00000424998 TSHZ2Q9NRE2 1034 aa6.98□□□□□ -1.29
CNKSR3-201ENST00000424998 IFNL1Q8IU54 200 aa6.97□□□□□ -1.29
CNKSR3-201ENST00000424998 NCAPD3P42695 1498 aa6.95□□□□□ -1.3
CNKSR3-201ENST00000424998 KIF21AQ7Z4S6 1674 aa6.94□□□□□ -1.3
CNKSR3-201ENST00000424998 GTPBP6O43824 516 aaPredicted RBP6.94□□□□□ -1.3
CNKSR3-201ENST00000424998 ATAD2BQ9ULI0 1458 aa6.93□□□□□ -1.3
CNKSR3-201ENST00000424998 HAX1O00165 279 aa6.93□□□□□ -1.3
CNKSR3-201ENST00000424998 RYDENQ9NUL5 291 aaKnown RBP6.93□□□□□ -1.3
CNKSR3-201ENST00000424998 C19orf67A6NJJ6 358 aa6.92□□□□□ -1.3
CNKSR3-201ENST00000424998 CABP2Q9NPB3 220 aa6.92□□□□□ -1.3
CNKSR3-201ENST00000424998 KDM2AQ9Y2K7 1162 aa6.92□□□□□ -1.3
CNKSR3-201ENST00000424998 GOLGA2Q08379 1002 aa6.9□□□□□ -1.3
CNKSR3-201ENST00000424998 MS4A3Q96HJ5 214 aa6.9□□□□□ -1.3
CNKSR3-201ENST00000424998 BAZ1AQ9NRL2 1556 aaPredicted RBP6.9□□□□□ -1.31
CNKSR3-201ENST00000424998 EFCAB3Q8N7B9 438 aa6.89□□□□□ -1.31
CNKSR3-201ENST00000424998 TMEM106CQ9BVX2 250 aa6.88□□□□□ -1.31
CNKSR3-201ENST00000424998 HMGXB3Q12766 1538 aa6.86□□□□□ -1.31
CNKSR3-201ENST00000424998 TRPC6Q9Y210 931 aa6.86□□□□□ -1.31
CNKSR3-201ENST00000424998 MFRPQ9BY79 579 aa6.85□□□□□ -1.31
CNKSR3-201ENST00000424998 RIMBP3CA6NJZ7 1639 aa6.85□□□□□ -1.31
CNKSR3-201ENST00000424998 RIMBP3BA6NNM3 1639 aa6.85□□□□□ -1.31
CNKSR3-201ENST00000424998 RIMBP3Q9UFD9 1639 aa6.85□□□□□ -1.31
CNKSR3-201ENST00000424998 SMARCA4P51532 1647 aa6.84□□□□□ -1.31
CNKSR3-201ENST00000424998 LAMC3Q9Y6N6 1575 aa6.84□□□□□ -1.31
CNKSR3-201ENST00000424998 NLRP6P59044 892 aa6.84□□□□□ -1.31
CNKSR3-201ENST00000424998 BCANQ96GW7 911 aa6.84□□□□□ -1.31
CNKSR3-201ENST00000424998 PHF8Q9UPP1 1060 aa6.84□□□□□ -1.31
CNKSR3-201ENST00000424998 BAZ1BQ9UIG0 1483 aaKnown RBP6.84□□□□□ -1.31
CNKSR3-201ENST00000424998 SOX12O15370 315 aa6.83□□□□□ -1.32
CNKSR3-201ENST00000424998 MKRN3Q13064 507 aaKnown RBP6.83□□□□□ -1.32
CNKSR3-201ENST00000424998 WDR62O43379 1518 aa6.82□□□□□ -1.32
CNKSR3-201ENST00000424998 MRC2Q9UBG0 1479 aa6.82□□□□□ -1.32
CNKSR3-201ENST00000424998 GALR2O43603 387 aaPredicted RBP6.82□□□□□ -1.32
CNKSR3-201ENST00000424998 EVX2Q03828 476 aa6.82□□□□□ -1.32
CNKSR3-201ENST00000424998 TIE1P35590 1138 aa6.8□□□□□ -1.32
CNKSR3-201ENST00000424998 PDS5BQ9NTI5 1447 aa6.8□□□□□ -1.32
CNKSR3-201ENST00000424998 TTLL13PA6NNM8 815 aa6.79□□□□□ -1.32
CNKSR3-201ENST00000424998 POTEHQ6S545 545 aa6.79□□□□□ -1.32
CNKSR3-201ENST00000424998 ARHGEF11O15085 1522 aa6.79□□□□□ -1.32
CNKSR3-201ENST00000424998 PPP1R37O75864 691 aa6.78□□□□□ -1.32
CNKSR3-201ENST00000424998 FBXO22Q8NEZ5 403 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms