RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 FAM9BQ8IZU0 186 aa14.77□□□□□ -0.04
TNC-203ENST00000423613 DDX10Q13206 875 aaKnown RBP14.77□□□□□ -0.05
TNC-203ENST00000423613 TPRNQ4KMQ1 711 aa14.75□□□□□ -0.05
TNC-203ENST00000423613 DDRGK1Q96HY6 314 aa14.75□□□□□ -0.05
TNC-203ENST00000423613 ARID3AQ99856 593 aa14.73□□□□□ -0.05
TNC-203ENST00000423613 LAS1LQ9Y4W2 734 aaKnown RBP14.72□□□□□ -0.05
TNC-203ENST00000423613 TULP1O00294 542 aaPredicted RBP14.71□□□□□ -0.05
TNC-203ENST00000423613 DEKP35659 375 aaKnown RBP14.69□□□□□ -0.06
TNC-203ENST00000423613 BECN1Q14457 450 aa14.69□□□□□ -0.06
TNC-203ENST00000423613 GOLGA6L22H0YM25 854 aa14.66□□□□□ -0.06
TNC-203ENST00000423613 PPP1R15AO75807 674 aaPredicted RBP14.66□□□□□ -0.06
TNC-203ENST00000423613 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
TNC-203ENST00000423613 TNNT3P45378 269 aaPredicted RBP14.65□□□□□ -0.06
TNC-203ENST00000423613 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
TNC-203ENST00000423613 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.64□□□□□ -0.07
TNC-203ENST00000423613 TMC1Q8TDI8 760 aa14.64□□□□□ -0.07
TNC-203ENST00000423613 PLCB2Q00722 1185 aa14.62□□□□□ -0.07
TNC-203ENST00000423613 NPHP1O15259 732 aa14.61□□□□□ -0.07
TNC-203ENST00000423613 PPM1GO15355 546 aaPredicted RBP14.6□□□□□ -0.07
TNC-203ENST00000423613 NOP58Q9Y2X3 529 aaKnown RBP14.59□□□□□ -0.07
TNC-203ENST00000423613 MRS2Q9HD23 443 aa14.58□□□□□ -0.07
TNC-203ENST00000423613 SCRIBQ14160 1630 aa14.58□□□□□ -0.08
TNC-203ENST00000423613 WDR43Q15061 677 aaKnown RBP eCLIP14.58□□□□□ -0.08
TNC-203ENST00000423613 KDM2AQ9Y2K7 1162 aa14.57□□□□□ -0.08
TNC-203ENST00000423613 ZRSR1Q15695 479 aaKnown RBP14.55□□□□□ -0.08
TNC-203ENST00000423613 MSNP26038 577 aaKnown RBP14.54□□□□□ -0.08
TNC-203ENST00000423613 MIER1Q8N108 512 aa14.54□□□□□ -0.08
TNC-203ENST00000423613 HIRIP3Q9BW71 556 aaPredicted RBP14.53□□□□□ -0.08
TNC-203ENST00000423613 LMOD2Q6P5Q4 547 aa14.53□□□□□ -0.08
TNC-203ENST00000423613 MYH16Q9H6N6 1097 aa14.53□□□□□ -0.08
TNC-203ENST00000423613 CHAF1AQ13111 956 aaPredicted RBP14.53□□□□□ -0.08
TNC-203ENST00000423613 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.08
TNC-203ENST00000423613 KCNH8Q96L42 1107 aa14.52□□□□□ -0.09
TNC-203ENST00000423613 CHMP7Q8WUX9 453 aaPredicted RBP14.51□□□□□ -0.09
TNC-203ENST00000423613 CALRP27797 417 aaKnown RBP14.49□□□□□ -0.09
TNC-203ENST00000423613 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
TNC-203ENST00000423613 TRHP20396 242 aaPredicted RBP14.49□□□□□ -0.09
TNC-203ENST00000423613 VSIG10Q8N0Z9 540 aa14.48□□□□□ -0.09
TNC-203ENST00000423613 MTUS2Q5JR59 1369 aa14.48□□□□□ -0.09
TNC-203ENST00000423613 TSPY4P0CV99 314 aa14.48□□□□□ -0.09
TNC-203ENST00000423613 TSPY10P0CW01 314 aa14.48□□□□□ -0.09
TNC-203ENST00000423613 GOLGA6L6A8MZA4 724 aa14.46□□□□□ -0.09
TNC-203ENST00000423613 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
TNC-203ENST00000423613 EIF4G2P78344 907 aaKnown RBP eCLIP14.43□□□□□ -0.1
TNC-203ENST00000423613 L1TD1Q5T7N2 865 aaKnown RBP14.43□□□□□ -0.1
TNC-203ENST00000423613 RRP7BPQ9NSQ0 103 aa14.41□□□□□ -0.1
TNC-203ENST00000423613 CLIP1P30622 1438 aa14.41□□□□□ -0.1
TNC-203ENST00000423613 A0A0U1RQG5 324 aaPredicted RBP14.41□□□□□ -0.1
TNC-203ENST00000423613 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
TNC-203ENST00000423613 DRC7Q8IY82 874 aa14.37□□□□□ -0.11
TNC-203ENST00000423613 HSP90AA2PQ14568 343 aaPredicted RBP14.37□□□□□ -0.11
TNC-203ENST00000423613 PNNQ9H307 717 aaKnown RBP14.36□□□□□ -0.11
TNC-203ENST00000423613 HSP90AB1P08238 724 aaKnown RBP14.35□□□□□ -0.11
TNC-203ENST00000423613 CLSTN1O94985 981 aa14.34□□□□□ -0.11
TNC-203ENST00000423613 SPRYD3Q8NCJ5 442 aa14.33□□□□□ -0.12
TNC-203ENST00000423613 NRDCO43847 1150 aa14.32□□□□□ -0.12
TNC-203ENST00000423613 SUPT16HQ9Y5B9 1047 aaKnown RBP14.32□□□□□ -0.12
TNC-203ENST00000423613 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
TNC-203ENST00000423613 CASC1Q6TDU7 716 aa14.3□□□□□ -0.12
TNC-203ENST00000423613 RGL3Q3MIN7 710 aa14.3□□□□□ -0.12
TNC-203ENST00000423613 NOC3LQ8WTT2 800 aaKnown RBP14.28□□□□□ -0.12
TNC-203ENST00000423613 CEP162Q5TB80 1403 aa14.27□□□□□ -0.12
TNC-203ENST00000423613 ISY1Q9ULR0 285 aaKnown RBP14.27□□□□□ -0.12
TNC-203ENST00000423613 RGS3P49796 1198 aa14.27□□□□□ -0.13
TNC-203ENST00000423613 SETQ01105 290 aaPredicted RBP14.27□□□□□ -0.13
TNC-203ENST00000423613 MYO15BQ96JP2 1530 aa14.26□□□□□ -0.13
TNC-203ENST00000423613 GOLGA3Q08378 1498 aa14.26□□□□□ -0.13
TNC-203ENST00000423613 RSF1Q96T23 1441 aaPredicted RBP14.26□□□□□ -0.13
TNC-203ENST00000423613 PODXL2Q9NZ53 605 aa14.26□□□□□ -0.13
TNC-203ENST00000423613 GZF1Q9H116 711 aaPredicted RBP14.26□□□□□ -0.13
TNC-203ENST00000423613 APPP05067 770 aa14.25□□□□□ -0.13
TNC-203ENST00000423613 TIMELESSQ9UNS1 1208 aa14.25□□□□□ -0.13
TNC-203ENST00000423613 MLECQ14165 292 aa14.24□□□□□ -0.13
TNC-203ENST00000423613 POGKQ9P215 609 aa14.24□□□□□ -0.13
TNC-203ENST00000423613 CFAP53Q96M91 514 aa14.24□□□□□ -0.13
TNC-203ENST00000423613 RBM19Q9Y4C8 960 aaKnown RBP14.24□□□□□ -0.13
TNC-203ENST00000423613 PTMSP20962 102 aa14.24□□□□□ -0.13
TNC-203ENST00000423613 KNSTRNQ9Y448 316 aa14.23□□□□□ -0.13
TNC-203ENST00000423613 GOLGA6L1Q8N7Z2 621 aa14.23□□□□□ -0.13
TNC-203ENST00000423613 PLEKHD1A6NEE1 506 aa14.22□□□□□ -0.13
TNC-203ENST00000423613 OS9Q13438 667 aaPredicted RBP14.22□□□□□ -0.13
TNC-203ENST00000423613 NAP1L2Q9ULW6 460 aaPredicted RBP14.22□□□□□ -0.13
TNC-203ENST00000423613 KIAA2012Q0VF49 1180 aa14.22□□□□□ -0.13
TNC-203ENST00000423613 RSPH6AQ9H0K4 717 aa14.22□□□□□ -0.13
TNC-203ENST00000423613 NEUROD2Q15784 382 aa14.21□□□□□ -0.13
TNC-203ENST00000423613 CARD11Q9BXL7 1154 aa14.21□□□□□ -0.13
TNC-203ENST00000423613 PPP4R2Q9NY27 417 aa14.21□□□□□ -0.14
TNC-203ENST00000423613 FTSJ3Q8IY81 847 aaKnown RBP14.2□□□□□ -0.14
TNC-203ENST00000423613 SOX12O15370 315 aa14.19□□□□□ -0.14
TNC-203ENST00000423613 HSCBQ8IWL3 235 aa14.19□□□□□ -0.14
TNC-203ENST00000423613 CDCA8Q53HL2 280 aa14.19□□□□□ -0.14
TNC-203ENST00000423613 ZNF771Q7L3S4 317 aaPredicted RBP14.19□□□□□ -0.14
TNC-203ENST00000423613 PKNOX2Q96KN3 472 aa14.19□□□□□ -0.14
TNC-203ENST00000423613 PATL2C9JE40 543 aaKnown RBP14.19□□□□□ -0.14
TNC-203ENST00000423613 EEA1Q15075 1411 aa14.19□□□□□ -0.14
TNC-203ENST00000423613 B4GALNT3Q6L9W6 998 aa14.18□□□□□ -0.14
TNC-203ENST00000423613 GOLGA6L4A6NEF3 574 aa14.18□□□□□ -0.14
TNC-203ENST00000423613 FGD1P98174 961 aa14.17□□□□□ -0.14
TNC-203ENST00000423613 CFDP1Q9UEE9 299 aaPredicted RBP14.17□□□□□ -0.14
TNC-203ENST00000423613 CCDC9Q9Y3X0 531 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms