RNA–Protein interactions for RNA: ENST00000420881.6

PCDH19-203, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 7,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-203ENST00000420881 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
PCDH19-203ENST00000420881 TONSLQ96HA7 1378 aa12.05□□□□□ -0.48
PCDH19-203ENST00000420881 PNNQ9H307 717 aaKnown RBP12.02□□□□□ -0.49
PCDH19-203ENST00000420881 KIAA2012Q0VF49 1180 aa12.01□□□□□ -0.49
PCDH19-203ENST00000420881 HSP90AA2PQ14568 343 aaPredicted RBP12.01□□□□□ -0.49
PCDH19-203ENST00000420881 DRC7Q8IY82 874 aa12□□□□□ -0.49
PCDH19-203ENST00000420881 LAS1LQ9Y4W2 734 aaKnown RBP12□□□□□ -0.49
PCDH19-203ENST00000420881 HSP90AB1P08238 724 aaKnown RBP11.99□□□□□ -0.49
PCDH19-203ENST00000420881 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
PCDH19-203ENST00000420881 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.98□□□□□ -0.49
PCDH19-203ENST00000420881 DDX10Q13206 875 aaKnown RBP11.98□□□□□ -0.49
PCDH19-203ENST00000420881 SALL2Q9Y467 1007 aaPredicted RBP11.98□□□□□ -0.49
PCDH19-203ENST00000420881 NOC3LQ8WTT2 800 aaKnown RBP11.98□□□□□ -0.49
PCDH19-203ENST00000420881 MRS2Q9HD23 443 aa11.95□□□□□ -0.5
PCDH19-203ENST00000420881 ARID4BQ4LE39 1312 aaPredicted RBP11.95□□□□□ -0.5
PCDH19-203ENST00000420881 IRX6P78412 446 aaPredicted RBP11.94□□□□□ -0.5
PCDH19-203ENST00000420881 GOLGA6L4A6NEF3 574 aa11.94□□□□□ -0.5
PCDH19-203ENST00000420881 A0A0U1RQG5 324 aaPredicted RBP11.93□□□□□ -0.5
PCDH19-203ENST00000420881 HSCBQ8IWL3 235 aa11.92□□□□□ -0.5
PCDH19-203ENST00000420881 APPP05067 770 aa11.91□□□□□ -0.5
PCDH19-203ENST00000420881 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
PCDH19-203ENST00000420881 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
PCDH19-203ENST00000420881 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
PCDH19-203ENST00000420881 CHMP4BQ9H444 224 aaKnown RBP11.89□□□□□ -0.51
PCDH19-203ENST00000420881 GOLGA6L3A6NEY3 463 aa11.89□□□□□ -0.51
PCDH19-203ENST00000420881 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
PCDH19-203ENST00000420881 SYAP1Q96A49 352 aaPredicted RBP11.88□□□□□ -0.51
PCDH19-203ENST00000420881 FTSJ3Q8IY81 847 aaKnown RBP11.87□□□□□ -0.51
PCDH19-203ENST00000420881 GBP4Q96PP9 640 aa11.87□□□□□ -0.51
PCDH19-203ENST00000420881 ARID3AQ99856 593 aa11.87□□□□□ -0.51
PCDH19-203ENST00000420881 DCAF1Q9Y4B6 1507 aa11.86□□□□□ -0.51
PCDH19-203ENST00000420881 TULP1O00294 542 aaPredicted RBP11.86□□□□□ -0.51
PCDH19-203ENST00000420881 MIER1Q8N108 512 aa11.83□□□□□ -0.52
PCDH19-203ENST00000420881 TPM4P67936 248 aa11.83□□□□□ -0.52
PCDH19-203ENST00000420881 FGD1P98174 961 aa11.83□□□□□ -0.52
PCDH19-203ENST00000420881 HTATSF1O43719 755 aaKnown RBP11.83□□□□□ -0.52
PCDH19-203ENST00000420881 MCCP23508 829 aa11.82□□□□□ -0.52
PCDH19-203ENST00000420881 NOM1Q5C9Z4 860 aaKnown RBP11.82□□□□□ -0.52
PCDH19-203ENST00000420881 GPS2Q13227 327 aa11.82□□□□□ -0.52
PCDH19-203ENST00000420881 MS4A1P11836 297 aa11.81□□□□□ -0.52
PCDH19-203ENST00000420881 SUPT16HQ9Y5B9 1047 aaKnown RBP11.81□□□□□ -0.52
PCDH19-203ENST00000420881 ZNF771Q7L3S4 317 aaPredicted RBP11.81□□□□□ -0.52
PCDH19-203ENST00000420881 TEX35Q5T0J7 233 aa11.79□□□□□ -0.52
PCDH19-203ENST00000420881 PHF14O94880 888 aa11.78□□□□□ -0.52
PCDH19-203ENST00000420881 KCNJ4P48050 445 aa11.77□□□□□ -0.53
PCDH19-203ENST00000420881 CCDC180Q9P1Z9 1646 aa11.76□□□□□ -0.53
PCDH19-203ENST00000420881 RRP12Q5JTH9 1297 aaKnown RBP11.76□□□□□ -0.53
PCDH19-203ENST00000420881 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
PCDH19-203ENST00000420881 CSPP1Q1MSJ5 1256 aa11.74□□□□□ -0.53
PCDH19-203ENST00000420881 RGS3P49796 1198 aa11.74□□□□□ -0.53
PCDH19-203ENST00000420881 CCDC34Q96HJ3 373 aa11.74□□□□□ -0.53
PCDH19-203ENST00000420881 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
PCDH19-203ENST00000420881 PODXL2Q9NZ53 605 aa11.73□□□□□ -0.53
PCDH19-203ENST00000420881 EIF4G2P78344 907 aaKnown RBP eCLIP11.72□□□□□ -0.53
PCDH19-203ENST00000420881 CCDC70Q6NSX1 233 aa11.72□□□□□ -0.53
PCDH19-203ENST00000420881 NAP1L2Q9ULW6 460 aaPredicted RBP11.71□□□□□ -0.53
PCDH19-203ENST00000420881 GNL2Q13823 731 aaKnown RBP11.71□□□□□ -0.53
PCDH19-203ENST00000420881 CLSTN1O94985 981 aa11.71□□□□□ -0.54
PCDH19-203ENST00000420881 CFAP53Q96M91 514 aa11.71□□□□□ -0.54
PCDH19-203ENST00000420881 CSRNP3Q8WYN3 585 aa11.71□□□□□ -0.54
PCDH19-203ENST00000420881 MTERF4Q7Z6M4 381 aaKnown RBP11.7□□□□□ -0.54
PCDH19-203ENST00000420881 ESF1Q9H501 851 aaKnown RBP11.7□□□□□ -0.54
PCDH19-203ENST00000420881 ZBTB7CA1YPR0 619 aa11.7□□□□□ -0.54
PCDH19-203ENST00000420881 TPM3P06753 285 aa11.69□□□□□ -0.54
PCDH19-203ENST00000420881 PKNOX2Q96KN3 472 aa11.69□□□□□ -0.54
PCDH19-203ENST00000420881 CALD1Q05682 793 aaKnown RBP11.69□□□□□ -0.54
PCDH19-203ENST00000420881 GZF1Q9H116 711 aaPredicted RBP11.69□□□□□ -0.54
PCDH19-203ENST00000420881 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
PCDH19-203ENST00000420881 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
PCDH19-203ENST00000420881 HMMRO75330 724 aa11.67□□□□□ -0.54
PCDH19-203ENST00000420881 CWC15Q9P013 229 aaKnown RBP11.67□□□□□ -0.54
PCDH19-203ENST00000420881 MAP7D2Q96T17 732 aa11.67□□□□□ -0.54
PCDH19-203ENST00000420881 PRM3Q9NNZ6 103 aa11.67□□□□□ -0.54
PCDH19-203ENST00000420881 OS9Q13438 667 aaPredicted RBP11.65□□□□□ -0.54
PCDH19-203ENST00000420881 CEP89Q96ST8 783 aa11.65□□□□□ -0.54
PCDH19-203ENST00000420881 CCDC66A2RUB6 948 aa11.65□□□□□ -0.54
PCDH19-203ENST00000420881 CHGAP10645 457 aaKnown RBP11.65□□□□□ -0.55
PCDH19-203ENST00000420881 RDXP35241 583 aaKnown RBP11.65□□□□□ -0.55
PCDH19-203ENST00000420881 CDCA8Q53HL2 280 aa11.64□□□□□ -0.55
PCDH19-203ENST00000420881 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
PCDH19-203ENST00000420881 DDX11L8A8MPP1 907 aa11.64□□□□□ -0.55
PCDH19-203ENST00000420881 SPRYD3Q8NCJ5 442 aa11.63□□□□□ -0.55
PCDH19-203ENST00000420881 PATL2C9JE40 543 aaKnown RBP11.63□□□□□ -0.55
PCDH19-203ENST00000420881 TAOK2Q9UL54 1235 aa11.63□□□□□ -0.55
PCDH19-203ENST00000420881 CCDC191Q8NCU4 936 aa11.63□□□□□ -0.55
PCDH19-203ENST00000420881 IPO9Q96P70 1041 aaKnown RBP11.63□□□□□ -0.55
PCDH19-203ENST00000420881 ZNF777Q9ULD5 760 aaPredicted RBP11.63□□□□□ -0.55
PCDH19-203ENST00000420881 KIAA1211Q6ZU35 1233 aa11.62□□□□□ -0.55
PCDH19-203ENST00000420881 HSP90B1P14625 803 aaKnown RBP11.61□□□□□ -0.55
PCDH19-203ENST00000420881 GOLGA2Q08379 1002 aa11.61□□□□□ -0.55
PCDH19-203ENST00000420881 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.61□□□□□ -0.55
PCDH19-203ENST00000420881 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
PCDH19-203ENST00000420881 TSR1Q2NL82 804 aaKnown RBP11.61□□□□□ -0.55
PCDH19-203ENST00000420881 KNSTRNQ9Y448 316 aa11.6□□□□□ -0.55
PCDH19-203ENST00000420881 CDR1P51861 262 aa11.6□□□□□ -0.55
PCDH19-203ENST00000420881 ACBD3Q9H3P7 528 aa11.6□□□□□ -0.55
PCDH19-203ENST00000420881 AK7Q96M32 723 aa11.59□□□□□ -0.55
PCDH19-203ENST00000420881 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
PCDH19-203ENST00000420881 SKOR2Q2VWA4 1001 aaPredicted RBP11.59□□□□□ -0.55
PCDH19-203ENST00000420881 TAF7LQ5H9L4 462 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms