RNA–Protein interactions for RNA: ENST00000420696.6

PBX1-203, Transcript of PBX homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-203ENST00000420696 HAP1P54257 671 aaPredicted RBP15.3■□□□□ 0.04
PBX1-203ENST00000420696 PNNQ9H307 717 aaKnown RBP15.3■□□□□ 0.04
PBX1-203ENST00000420696 SALL2Q9Y467 1007 aaPredicted RBP15.3■□□□□ 0.04
PBX1-203ENST00000420696 CFAP53Q96M91 514 aa15.28■□□□□ 0.04
PBX1-203ENST00000420696 PLPPR3Q6T4P5 718 aa15.28■□□□□ 0.04
PBX1-203ENST00000420696 FGD1P98174 961 aa15.27■□□□□ 0.04
PBX1-203ENST00000420696 MRS2Q9HD23 443 aa15.26■□□□□ 0.03
PBX1-203ENST00000420696 GOLGA6L4A6NEF3 574 aa15.25■□□□□ 0.03
PBX1-203ENST00000420696 NPHP1O15259 732 aa15.25■□□□□ 0.03
PBX1-203ENST00000420696 EIF4G2P78344 907 aaKnown RBP eCLIP15.25■□□□□ 0.03
PBX1-203ENST00000420696 KIAA2012Q0VF49 1180 aa15.24■□□□□ 0.03
PBX1-203ENST00000420696 C14orf37Q86TY3 774 aa15.24■□□□□ 0.03
PBX1-203ENST00000420696 TSPY4P0CV99 314 aa15.23■□□□□ 0.03
PBX1-203ENST00000420696 TSPY10P0CW01 314 aa15.23■□□□□ 0.03
PBX1-203ENST00000420696 NAP1L5Q96NT1 182 aaPredicted RBP15.23■□□□□ 0.03
PBX1-203ENST00000420696 PLCB2Q00722 1185 aa15.22■□□□□ 0.03
PBX1-203ENST00000420696 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
PBX1-203ENST00000420696 PPP1R15AO75807 674 aaPredicted RBP15.21■□□□□ 0.03
PBX1-203ENST00000420696 CLSTN1O94985 981 aa15.21■□□□□ 0.03
PBX1-203ENST00000420696 USP35Q9P2H5 1018 aa15.21■□□□□ 0.03
PBX1-203ENST00000420696 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
PBX1-203ENST00000420696 MS4A1P11836 297 aa15.2■□□□□ 0.02
PBX1-203ENST00000420696 CDCA8Q53HL2 280 aa15.2■□□□□ 0.02
PBX1-203ENST00000420696 ZBTB7CA1YPR0 619 aa15.19■□□□□ 0.02
PBX1-203ENST00000420696 ARID3CA6NKF2 412 aa15.19■□□□□ 0.02
PBX1-203ENST00000420696 CFAP44Q96MT7 982 aa15.19■□□□□ 0.02
PBX1-203ENST00000420696 DDX10Q13206 875 aaKnown RBP15.17■□□□□ 0.02
PBX1-203ENST00000420696 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
PBX1-203ENST00000420696 KCNJ4P48050 445 aa15.17■□□□□ 0.02
PBX1-203ENST00000420696 P3H3Q8IVL6 736 aa15.15■□□□□ 0.02
PBX1-203ENST00000420696 PRM3Q9NNZ6 103 aa15.15■□□□□ 0.02
PBX1-203ENST00000420696 FTSJ3Q8IY81 847 aaKnown RBP15.15■□□□□ 0.02
PBX1-203ENST00000420696 NOC3LQ8WTT2 800 aaKnown RBP15.13■□□□□ 0.01
PBX1-203ENST00000420696 NUDCQ9Y266 331 aa15.12■□□□□ 0.01
PBX1-203ENST00000420696 CCDC34Q96HJ3 373 aa15.12■□□□□ 0.01
PBX1-203ENST00000420696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.12■□□□□ 0.01
PBX1-203ENST00000420696 OS9Q13438 667 aaPredicted RBP15.11■□□□□ 0.01
PBX1-203ENST00000420696 MSNP26038 577 aaKnown RBP15.1■□□□□ 0.01
PBX1-203ENST00000420696 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
PBX1-203ENST00000420696 TNNT3P45378 269 aaPredicted RBP15.09■□□□□ 0.01
PBX1-203ENST00000420696 MAPK8IP3Q9UPT6 1336 aa15.09■□□□□ 0.01
PBX1-203ENST00000420696 MCCP23508 829 aa15.08■□□□□ 0.01
PBX1-203ENST00000420696 HSP90AB1P08238 724 aaKnown RBP15.07■□□□□ 0
PBX1-203ENST00000420696 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
PBX1-203ENST00000420696 NAP1L2Q9ULW6 460 aaPredicted RBP15.07■□□□□ 0
PBX1-203ENST00000420696 GOLGA6L1Q8N7Z2 621 aa15.05■□□□□ -0
PBX1-203ENST00000420696 DRC7Q8IY82 874 aa15.04■□□□□ -0
PBX1-203ENST00000420696 TPRNQ4KMQ1 711 aa15.04■□□□□ -0
PBX1-203ENST00000420696 PTMSP20962 102 aa15.03■□□□□ -0
PBX1-203ENST00000420696 KDM2AQ9Y2K7 1162 aa15.03■□□□□ -0
PBX1-203ENST00000420696 CEP89Q96ST8 783 aa15.03■□□□□ -0
PBX1-203ENST00000420696 A0A0U1RQG5 324 aaPredicted RBP15.02■□□□□ -0
PBX1-203ENST00000420696 GNL2Q13823 731 aaKnown RBP15.02■□□□□ -0
PBX1-203ENST00000420696 ISY1Q9ULR0 285 aaKnown RBP15.02□□□□□ -0.01
PBX1-203ENST00000420696 KNSTRNQ9Y448 316 aa15.02□□□□□ -0.01
PBX1-203ENST00000420696 TPM4P67936 248 aa14.99□□□□□ -0.01
PBX1-203ENST00000420696 HSCBQ8IWL3 235 aa14.99□□□□□ -0.01
PBX1-203ENST00000420696 CHMP4AQ9BY43 222 aa14.99□□□□□ -0.01
PBX1-203ENST00000420696 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
PBX1-203ENST00000420696 TAOK2Q9UL54 1235 aa14.97□□□□□ -0.01
PBX1-203ENST00000420696 TMX4Q9H1E5 349 aaPredicted RBP14.97□□□□□ -0.01
PBX1-203ENST00000420696 CALRP27797 417 aaKnown RBP14.96□□□□□ -0.01
PBX1-203ENST00000420696 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
PBX1-203ENST00000420696 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
PBX1-203ENST00000420696 KRI1Q8N9T8 703 aaKnown RBP14.94□□□□□ -0.02
PBX1-203ENST00000420696 SYAP1Q96A49 352 aaPredicted RBP14.93□□□□□ -0.02
PBX1-203ENST00000420696 LMOD2Q6P5Q4 547 aa14.92□□□□□ -0.02
PBX1-203ENST00000420696 SETQ01105 290 aaPredicted RBP14.91□□□□□ -0.02
PBX1-203ENST00000420696 KIAA1211Q6ZU35 1233 aa14.91□□□□□ -0.02
PBX1-203ENST00000420696 CHIC2Q9UKJ5 165 aa14.91□□□□□ -0.02
PBX1-203ENST00000420696 NACADO15069 1562 aa14.9□□□□□ -0.02
PBX1-203ENST00000420696 HDAC5Q9UQL6 1122 aa14.9□□□□□ -0.02
PBX1-203ENST00000420696 TPM3P06753 285 aa14.9□□□□□ -0.02
PBX1-203ENST00000420696 LAS1LQ9Y4W2 734 aaKnown RBP14.89□□□□□ -0.03
PBX1-203ENST00000420696 PABPN1Q86U42 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
PBX1-203ENST00000420696 GBP4Q96PP9 640 aa14.88□□□□□ -0.03
PBX1-203ENST00000420696 IRX6P78412 446 aaPredicted RBP14.87□□□□□ -0.03
PBX1-203ENST00000420696 RGS3P49796 1198 aa14.87□□□□□ -0.03
PBX1-203ENST00000420696 HDGFP51858 240 aaKnown RBP14.86□□□□□ -0.03
PBX1-203ENST00000420696 POGKQ9P215 609 aa14.86□□□□□ -0.03
PBX1-203ENST00000420696 AMER1Q5JTC6 1135 aaPredicted RBP14.85□□□□□ -0.03
PBX1-203ENST00000420696 MTUS2Q5JR59 1369 aa14.85□□□□□ -0.03
PBX1-203ENST00000420696 ARID4BQ4LE39 1312 aaPredicted RBP14.85□□□□□ -0.03
PBX1-203ENST00000420696 PPP4R2Q9NY27 417 aa14.84□□□□□ -0.03
PBX1-203ENST00000420696 NOP58Q9Y2X3 529 aaKnown RBP14.84□□□□□ -0.03
PBX1-203ENST00000420696 FRAT1Q92837 279 aaPredicted RBP14.84□□□□□ -0.03
PBX1-203ENST00000420696 CSPP1Q1MSJ5 1256 aa14.83□□□□□ -0.03
PBX1-203ENST00000420696 NEUROD2Q15784 382 aa14.82□□□□□ -0.04
PBX1-203ENST00000420696 KIF3AQ9Y496 699 aa14.82□□□□□ -0.04
PBX1-203ENST00000420696 CHMP4CQ96CF2 233 aa14.81□□□□□ -0.04
PBX1-203ENST00000420696 RASSF8Q8NHQ8 419 aa14.8□□□□□ -0.04
PBX1-203ENST00000420696 IPO8O15397 1037 aaKnown RBP14.79□□□□□ -0.04
PBX1-203ENST00000420696 DCAF1Q9Y4B6 1507 aa14.79□□□□□ -0.04
PBX1-203ENST00000420696 GPS2Q13227 327 aa14.78□□□□□ -0.04
PBX1-203ENST00000420696 PLEKHD1A6NEE1 506 aa14.78□□□□□ -0.04
PBX1-203ENST00000420696 CCDC70Q6NSX1 233 aa14.77□□□□□ -0.04
PBX1-203ENST00000420696 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.04
PBX1-203ENST00000420696 CALD1Q05682 793 aaKnown RBP14.77□□□□□ -0.05
PBX1-203ENST00000420696 TSR1Q2NL82 804 aaKnown RBP14.76□□□□□ -0.05
PBX1-203ENST00000420696 RTF1Q92541 710 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms