RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
SMPD4P1-201ENST00000416717 GRIN2BQ13224 1484 aa16.52■□□□□ 0.24
SMPD4P1-201ENST00000416717 EIF4G3O43432 1585 aaKnown RBP16.52■□□□□ 0.24
SMPD4P1-201ENST00000416717 ADAMTS12P58397 1594 aa16.49■□□□□ 0.23
SMPD4P1-201ENST00000416717 FHAD1B1AJZ9 1412 aa16.48■□□□□ 0.23
SMPD4P1-201ENST00000416717 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
SMPD4P1-201ENST00000416717 FHOD3Q2V2M9 1422 aa16.44■□□□□ 0.22
SMPD4P1-201ENST00000416717 HRCP23327 699 aa16.42■□□□□ 0.22
SMPD4P1-201ENST00000416717 ATP1B4Q9UN42 357 aaPredicted RBP16.42■□□□□ 0.22
SMPD4P1-201ENST00000416717 KANK4Q5T7N3 995 aaPredicted RBP16.4■□□□□ 0.22
SMPD4P1-201ENST00000416717 FBLN2P98095 1184 aa16.4■□□□□ 0.22
SMPD4P1-201ENST00000416717 EFCAB5A4FU69 1503 aa16.39■□□□□ 0.21
SMPD4P1-201ENST00000416717 PCF11O94913 1555 aaKnown RBP16.36■□□□□ 0.21
SMPD4P1-201ENST00000416717 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
SMPD4P1-201ENST00000416717 IQGAP2Q13576 1575 aa16.35■□□□□ 0.21
SMPD4P1-201ENST00000416717 GRIN2AQ12879 1464 aa16.35■□□□□ 0.21
SMPD4P1-201ENST00000416717 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
SMPD4P1-201ENST00000416717 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
SMPD4P1-201ENST00000416717 SYNJ2O15056 1496 aa16.31■□□□□ 0.2
SMPD4P1-201ENST00000416717 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
SMPD4P1-201ENST00000416717 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
SMPD4P1-201ENST00000416717 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
SMPD4P1-201ENST00000416717 CEP170Q5SW79 1584 aa16.27■□□□□ 0.2
SMPD4P1-201ENST00000416717 KIAA0586Q9BVV6 1533 aa16.26■□□□□ 0.19
SMPD4P1-201ENST00000416717 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
SMPD4P1-201ENST00000416717 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
SMPD4P1-201ENST00000416717 CFAP43Q8NDM7 1665 aa16.25■□□□□ 0.19
SMPD4P1-201ENST00000416717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.24■□□□□ 0.19
SMPD4P1-201ENST00000416717 LRRIQ1Q96JM4 1722 aa16.23■□□□□ 0.19
SMPD4P1-201ENST00000416717 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
SMPD4P1-201ENST00000416717 UGGT2Q9NYU1 1516 aa16.22■□□□□ 0.19
SMPD4P1-201ENST00000416717 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
SMPD4P1-201ENST00000416717 CHD1O14646 1710 aa16.19■□□□□ 0.18
SMPD4P1-201ENST00000416717 ARID3CA6NKF2 412 aa16.19■□□□□ 0.18
SMPD4P1-201ENST00000416717 DISP1Q96F81 1524 aa16.18■□□□□ 0.18
SMPD4P1-201ENST00000416717 KIAA0556O60303 1618 aa16.18■□□□□ 0.18
SMPD4P1-201ENST00000416717 NUP160Q12769 1436 aa16.17■□□□□ 0.18
SMPD4P1-201ENST00000416717 CCER1Q8TC90 406 aaPredicted RBP16.16■□□□□ 0.18
SMPD4P1-201ENST00000416717 JPH4Q96JJ6 628 aa16.15■□□□□ 0.18
SMPD4P1-201ENST00000416717 ITGAEP38570 1179 aa16.13■□□□□ 0.17
SMPD4P1-201ENST00000416717 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
SMPD4P1-201ENST00000416717 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
SMPD4P1-201ENST00000416717 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
SMPD4P1-201ENST00000416717 HECW1Q76N89 1606 aa16.12■□□□□ 0.17
SMPD4P1-201ENST00000416717 CCNB3Q8WWL7 1395 aa16.12■□□□□ 0.17
SMPD4P1-201ENST00000416717 CDK13Q14004 1512 aaKnown RBP16.09■□□□□ 0.17
SMPD4P1-201ENST00000416717 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
SMPD4P1-201ENST00000416717 EPRSP07814 1512 aaKnown RBP16.07■□□□□ 0.16
SMPD4P1-201ENST00000416717 CARMIL2Q6F5E8 1435 aa16.07■□□□□ 0.16
SMPD4P1-201ENST00000416717 FAM50AQ14320 339 aaKnown RBP16.07■□□□□ 0.16
SMPD4P1-201ENST00000416717 CCDC18Q5T9S5 1454 aa16.05■□□□□ 0.16
SMPD4P1-201ENST00000416717 MAGI3Q5TCQ9 1506 aa16.05■□□□□ 0.16
SMPD4P1-201ENST00000416717 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
SMPD4P1-201ENST00000416717 PLB1Q6P1J6 1458 aa16.04■□□□□ 0.16
SMPD4P1-201ENST00000416717 PRG4Q92954 1404 aaPredicted RBP16.03■□□□□ 0.16
SMPD4P1-201ENST00000416717 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.16
SMPD4P1-201ENST00000416717 EHBP1L1Q8N3D4 1523 aa16.02■□□□□ 0.16
SMPD4P1-201ENST00000416717 NUP153P49790 1475 aaKnown RBP16.02■□□□□ 0.15
SMPD4P1-201ENST00000416717 NCOA2Q15596 1464 aa16.01■□□□□ 0.15
SMPD4P1-201ENST00000416717 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
SMPD4P1-201ENST00000416717 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
SMPD4P1-201ENST00000416717 MYOM3Q5VTT5 1437 aa15.94■□□□□ 0.14
SMPD4P1-201ENST00000416717 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
SMPD4P1-201ENST00000416717 PTPRGP23470 1445 aa15.93■□□□□ 0.14
SMPD4P1-201ENST00000416717 ABCA8O94911 1581 aa15.92■□□□□ 0.14
SMPD4P1-201ENST00000416717 CDK11AQ9UQ88 783 aaPredicted RBP15.91■□□□□ 0.14
SMPD4P1-201ENST00000416717 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
SMPD4P1-201ENST00000416717 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
SMPD4P1-201ENST00000416717 PTPN23Q9H3S7 1636 aa15.89■□□□□ 0.13
SMPD4P1-201ENST00000416717 RAB3GAP2Q9H2M9 1393 aa15.86■□□□□ 0.13
SMPD4P1-201ENST00000416717 ATP10BO94823 1461 aa15.86■□□□□ 0.13
SMPD4P1-201ENST00000416717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.86■□□□□ 0.135e-7■■■□□ 18.7
SMPD4P1-201ENST00000416717 TROQ12816 1431 aaPredicted RBP15.85■□□□□ 0.13
SMPD4P1-201ENST00000416717 KIF14Q15058 1648 aa15.84■□□□□ 0.13
SMPD4P1-201ENST00000416717 SETD5Q9C0A6 1442 aa15.84■□□□□ 0.13
SMPD4P1-201ENST00000416717 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.13
SMPD4P1-201ENST00000416717 PTPRKQ15262 1439 aa15.83■□□□□ 0.12
SMPD4P1-201ENST00000416717 PLEKHD1A6NEE1 506 aa15.83■□□□□ 0.12
SMPD4P1-201ENST00000416717 UACAQ9BZF9 1416 aa15.82■□□□□ 0.12
SMPD4P1-201ENST00000416717 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
SMPD4P1-201ENST00000416717 ZNF644Q9H582 1327 aaPredicted RBP15.8■□□□□ 0.12
SMPD4P1-201ENST00000416717 TCOF1Q13428 1488 aaKnown RBP15.78■□□□□ 0.12
SMPD4P1-201ENST00000416717 MIA2Q96PC5 1412 aa15.78■□□□□ 0.12
SMPD4P1-201ENST00000416717 ADCY10Q96PN6 1610 aa15.78■□□□□ 0.12
SMPD4P1-201ENST00000416717 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
SMPD4P1-201ENST00000416717 RRP7BPQ9NSQ0 103 aa15.75■□□□□ 0.11
SMPD4P1-201ENST00000416717 CFDP1Q9UEE9 299 aaPredicted RBP15.75■□□□□ 0.11
SMPD4P1-201ENST00000416717 ITSN2Q9NZM3 1697 aa15.75■□□□□ 0.11
SMPD4P1-201ENST00000416717 ABCC2Q92887 1545 aa15.75■□□□□ 0.11
SMPD4P1-201ENST00000416717 OSCARQ8IYS5 282 aa15.75■□□□□ 0.11
SMPD4P1-201ENST00000416717 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
SMPD4P1-201ENST00000416717 CDC42BPAQ5VT25 1732 aa15.73■□□□□ 0.11
SMPD4P1-201ENST00000416717 HFM1A2PYH4 1435 aa15.71■□□□□ 0.11
SMPD4P1-201ENST00000416717 CAMSAP2Q08AD1 1489 aa15.71■□□□□ 0.1
SMPD4P1-201ENST00000416717 NAIPQ13075 1403 aa15.71■□□□□ 0.1
SMPD4P1-201ENST00000416717 KCNH8Q96L42 1107 aa15.7■□□□□ 0.1
SMPD4P1-201ENST00000416717 ABCC10Q5T3U5 1492 aa15.7■□□□□ 0.1
SMPD4P1-201ENST00000416717 ZCCHC11Q5TAX3 1644 aaKnown RBP15.69■□□□□ 0.1
SMPD4P1-201ENST00000416717 DAPK1P53355 1430 aa15.69■□□□□ 0.1
SMPD4P1-201ENST00000416717 CLSPNQ9HAW4 1339 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms