RNA–Protein interactions for RNA: ENST00000416516.2

DCLK3-201, Transcript of doublecortin like kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DCLK3, Length 5,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3-201ENST00000416516 BECN1Q14457 450 aa14.35□□□□□ -0.11
DCLK3-201ENST00000416516 GOLGA6L22H0YM25 854 aa14.35□□□□□ -0.11
DCLK3-201ENST00000416516 IRX6P78412 446 aaPredicted RBP14.34□□□□□ -0.11
DCLK3-201ENST00000416516 CEP162Q5TB80 1403 aa14.32□□□□□ -0.12
DCLK3-201ENST00000416516 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
DCLK3-201ENST00000416516 C14orf37Q86TY3 774 aa14.32□□□□□ -0.12
DCLK3-201ENST00000416516 CHMP4BQ9H444 224 aaKnown RBP14.32□□□□□ -0.12
DCLK3-201ENST00000416516 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
DCLK3-201ENST00000416516 MRS2Q9HD23 443 aa14.31□□□□□ -0.12
DCLK3-201ENST00000416516 ZRSR1Q15695 479 aaKnown RBP14.31□□□□□ -0.12
DCLK3-201ENST00000416516 A0A0G2JS52 829 aa14.31□□□□□ -0.12
DCLK3-201ENST00000416516 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
DCLK3-201ENST00000416516 CLIP1P30622 1438 aa14.3□□□□□ -0.12
DCLK3-201ENST00000416516 SUPT16HQ9Y5B9 1047 aaKnown RBP14.3□□□□□ -0.12
DCLK3-201ENST00000416516 HIRIP3Q9BW71 556 aaPredicted RBP14.3□□□□□ -0.12
DCLK3-201ENST00000416516 CASC1Q6TDU7 716 aa14.3□□□□□ -0.12
DCLK3-201ENST00000416516 PLEKHD1A6NEE1 506 aa14.29□□□□□ -0.12
DCLK3-201ENST00000416516 EIF4G2P78344 907 aaKnown RBP eCLIP14.29□□□□□ -0.12
DCLK3-201ENST00000416516 CHIC2Q9UKJ5 165 aa14.26□□□□□ -0.13
DCLK3-201ENST00000416516 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
DCLK3-201ENST00000416516 SALL2Q9Y467 1007 aaPredicted RBP14.23□□□□□ -0.13
DCLK3-201ENST00000416516 NUDCQ9Y266 331 aa14.22□□□□□ -0.13
DCLK3-201ENST00000416516 MS4A1P11836 297 aa14.22□□□□□ -0.13
DCLK3-201ENST00000416516 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.13
DCLK3-201ENST00000416516 PNNQ9H307 717 aaKnown RBP14.21□□□□□ -0.13
DCLK3-201ENST00000416516 EEA1Q15075 1411 aa14.21□□□□□ -0.13
DCLK3-201ENST00000416516 GOLGA3Q08378 1498 aa14.2□□□□□ -0.14
DCLK3-201ENST00000416516 TNIKQ9UKE5 1360 aa14.19□□□□□ -0.14
DCLK3-201ENST00000416516 ZBTB7CA1YPR0 619 aa14.19□□□□□ -0.14
DCLK3-201ENST00000416516 HDGFP51858 240 aaKnown RBP14.19□□□□□ -0.14
DCLK3-201ENST00000416516 KNSTRNQ9Y448 316 aa14.18□□□□□ -0.14
DCLK3-201ENST00000416516 ARID4BQ4LE39 1312 aaPredicted RBP14.16□□□□□ -0.14
DCLK3-201ENST00000416516 MAPK8IP3Q9UPT6 1336 aa14.16□□□□□ -0.14
DCLK3-201ENST00000416516 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
DCLK3-201ENST00000416516 NRDCO43847 1150 aa14.15□□□□□ -0.14
DCLK3-201ENST00000416516 GOLGA6L6A8MZA4 724 aa14.15□□□□□ -0.14
DCLK3-201ENST00000416516 CFAP44Q96MT7 982 aa14.14□□□□□ -0.15
DCLK3-201ENST00000416516 FTSJ3Q8IY81 847 aaKnown RBP14.12□□□□□ -0.15
DCLK3-201ENST00000416516 NPHP1O15259 732 aa14.11□□□□□ -0.15
DCLK3-201ENST00000416516 KCNH8Q96L42 1107 aa14.11□□□□□ -0.15
DCLK3-201ENST00000416516 PTMAP06454 111 aaKnown RBP14.1□□□□□ -0.15
DCLK3-201ENST00000416516 ARXQ96QS3 562 aa14.09□□□□□ -0.15
DCLK3-201ENST00000416516 CFDP1Q9UEE9 299 aaPredicted RBP14.09□□□□□ -0.15
DCLK3-201ENST00000416516 PPP4R2Q9NY27 417 aa14.08□□□□□ -0.15
DCLK3-201ENST00000416516 POGKQ9P215 609 aa14.08□□□□□ -0.15
DCLK3-201ENST00000416516 PPM1GO15355 546 aaPredicted RBP14.08□□□□□ -0.16
DCLK3-201ENST00000416516 RBM19Q9Y4C8 960 aaKnown RBP14.08□□□□□ -0.16
DCLK3-201ENST00000416516 L1TD1Q5T7N2 865 aaKnown RBP14.07□□□□□ -0.16
DCLK3-201ENST00000416516 CHMP4AQ9BY43 222 aa14.07□□□□□ -0.16
DCLK3-201ENST00000416516 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
DCLK3-201ENST00000416516 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
DCLK3-201ENST00000416516 NOP58Q9Y2X3 529 aaKnown RBP14.04□□□□□ -0.16
DCLK3-201ENST00000416516 FGD1P98174 961 aa14.03□□□□□ -0.16
DCLK3-201ENST00000416516 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
DCLK3-201ENST00000416516 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
DCLK3-201ENST00000416516 TSHZ2Q9NRE2 1034 aa14.03□□□□□ -0.16
DCLK3-201ENST00000416516 KANK1Q14678 1352 aa14.03□□□□□ -0.16
DCLK3-201ENST00000416516 CARD11Q9BXL7 1154 aa14.02□□□□□ -0.16
DCLK3-201ENST00000416516 RB1CC1Q8TDY2 1594 aa14.02□□□□□ -0.17
DCLK3-201ENST00000416516 WRNQ14191 1432 aaPredicted RBP eCLIP14.02□□□□□ -0.17
DCLK3-201ENST00000416516 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.17
DCLK3-201ENST00000416516 OS9Q13438 667 aaPredicted RBP14.01□□□□□ -0.17
DCLK3-201ENST00000416516 RGL3Q3MIN7 710 aa14.01□□□□□ -0.17
DCLK3-201ENST00000416516 DNTTIP2Q5QJE6 756 aaKnown RBP13.99□□□□□ -0.17
DCLK3-201ENST00000416516 B4GALNT3Q6L9W6 998 aa13.99□□□□□ -0.17
DCLK3-201ENST00000416516 KCNJ4P48050 445 aa13.98□□□□□ -0.17
DCLK3-201ENST00000416516 LMOD2Q6P5Q4 547 aa13.98□□□□□ -0.17
DCLK3-201ENST00000416516 RTN4Q9NQC3 1192 aaKnown RBP13.98□□□□□ -0.17
DCLK3-201ENST00000416516 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
DCLK3-201ENST00000416516 MCCP23508 829 aa13.98□□□□□ -0.17
DCLK3-201ENST00000416516 SENP3-EIF4A1A0A087X0R7 540 aa13.97□□□□□ -0.17
DCLK3-201ENST00000416516 CCER2I3L3R5 266 aa13.97□□□□□ -0.17
DCLK3-201ENST00000416516 PLEKHG5O94827 1062 aa13.97□□□□□ -0.17
DCLK3-201ENST00000416516 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
DCLK3-201ENST00000416516 GOLGA6L4A6NEF3 574 aa13.96□□□□□ -0.18
DCLK3-201ENST00000416516 LAS1LQ9Y4W2 734 aaKnown RBP13.95□□□□□ -0.18
DCLK3-201ENST00000416516 TMF1P82094 1093 aa13.94□□□□□ -0.18
DCLK3-201ENST00000416516 TIMELESSQ9UNS1 1208 aa13.94□□□□□ -0.18
DCLK3-201ENST00000416516 HDAC5Q9UQL6 1122 aa13.93□□□□□ -0.18
DCLK3-201ENST00000416516 CCNB3Q8WWL7 1395 aa13.93□□□□□ -0.18
DCLK3-201ENST00000416516 CALD1Q05682 793 aaKnown RBP13.93□□□□□ -0.18
DCLK3-201ENST00000416516 SOGA1O94964 1423 aa13.92□□□□□ -0.18
DCLK3-201ENST00000416516 HSP90AB1P08238 724 aaKnown RBP13.91□□□□□ -0.18
DCLK3-201ENST00000416516 CHAF1AQ13111 956 aaPredicted RBP13.9□□□□□ -0.18
DCLK3-201ENST00000416516 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
DCLK3-201ENST00000416516 PTMSP20962 102 aa13.89□□□□□ -0.19
DCLK3-201ENST00000416516 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
DCLK3-201ENST00000416516 FHAD1B1AJZ9 1412 aa13.89□□□□□ -0.19
DCLK3-201ENST00000416516 RTF1Q92541 710 aaKnown RBP13.88□□□□□ -0.19
DCLK3-201ENST00000416516 U2SURPO15042 1029 aaKnown RBP13.87□□□□□ -0.19
DCLK3-201ENST00000416516 HTATSF1O43719 755 aaKnown RBP13.87□□□□□ -0.19
DCLK3-201ENST00000416516 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
DCLK3-201ENST00000416516 CCDC34Q96HJ3 373 aa13.87□□□□□ -0.19
DCLK3-201ENST00000416516 VPS8Q8N3P4 1428 aa13.87□□□□□ -0.19
DCLK3-201ENST00000416516 ERCC6Q03468 1493 aa13.86□□□□□ -0.19
DCLK3-201ENST00000416516 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
DCLK3-201ENST00000416516 HSCBQ8IWL3 235 aa13.86□□□□□ -0.19
DCLK3-201ENST00000416516 KIAA2012Q0VF49 1180 aa13.85□□□□□ -0.19
DCLK3-201ENST00000416516 HDGFL2Q7Z4V5 671 aaPredicted RBP13.85□□□□□ -0.19
DCLK3-201ENST00000416516 FRAT1Q92837 279 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms