RNA–Protein interactions for RNA: ENST00000416247.3

SMIM13-202, Transcript of small integral membrane protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM13, Length 4,688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-202ENST00000416247 PLEKHD1A6NEE1 506 aa21.96■■□□□ 1.11
SMIM13-202ENST00000416247 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
SMIM13-202ENST00000416247 MRS2Q9HD23 443 aa21.92■■□□□ 1.1
SMIM13-202ENST00000416247 EIF4G2P78344 907 aaKnown RBP eCLIP21.88■■□□□ 1.09
SMIM13-202ENST00000416247 NPM2Q86SE8 214 aaKnown RBP21.87■■□□□ 1.09
SMIM13-202ENST00000416247 CFDP1Q9UEE9 299 aaPredicted RBP21.85■■□□□ 1.09
SMIM13-202ENST00000416247 SOGA1O94964 1423 aa21.85■■□□□ 1.09
SMIM13-202ENST00000416247 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
SMIM13-202ENST00000416247 RGL3Q3MIN7 710 aa21.83■■□□□ 1.09
SMIM13-202ENST00000416247 ANP32AP39687 249 aaKnown RBP21.83■■□□□ 1.09
SMIM13-202ENST00000416247 MROH2BQ7Z745 1585 aa21.79■■□□□ 1.08
SMIM13-202ENST00000416247 WDR43Q15061 677 aaKnown RBP eCLIP21.76■■□□□ 1.07
SMIM13-202ENST00000416247 SIN3AQ96ST3 1273 aa21.74■■□□□ 1.07
SMIM13-202ENST00000416247 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
SMIM13-202ENST00000416247 CUX2O14529 1486 aa21.72■■□□□ 1.07
SMIM13-202ENST00000416247 IRX6P78412 446 aaPredicted RBP21.72■■□□□ 1.07
SMIM13-202ENST00000416247 CCDC136Q96JN2 1154 aa21.72■■□□□ 1.07
SMIM13-202ENST00000416247 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
SMIM13-202ENST00000416247 ERCC6Q03468 1493 aa21.68■■□□□ 1.06
SMIM13-202ENST00000416247 SENP3-EIF4A1A0A087X0R7 540 aa21.66■■□□□ 1.06
SMIM13-202ENST00000416247 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
SMIM13-202ENST00000416247 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
SMIM13-202ENST00000416247 CCNB3Q8WWL7 1395 aa21.62■■□□□ 1.05
SMIM13-202ENST00000416247 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.59■■□□□ 1.05
SMIM13-202ENST00000416247 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
SMIM13-202ENST00000416247 PPP1R15AO75807 674 aaPredicted RBP21.59■■□□□ 1.05
SMIM13-202ENST00000416247 CARD11Q9BXL7 1154 aa21.59■■□□□ 1.05
SMIM13-202ENST00000416247 KANK4Q5T7N3 995 aaPredicted RBP21.54■■□□□ 1.04
SMIM13-202ENST00000416247 UPF2Q9HAU5 1272 aaKnown RBP21.54■■□□□ 1.04
SMIM13-202ENST00000416247 HSP90AA1P07900 732 aaKnown RBP21.53■■□□□ 1.04
SMIM13-202ENST00000416247 PLEKHG5O94827 1062 aa21.52■■□□□ 1.04
SMIM13-202ENST00000416247 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.04
SMIM13-202ENST00000416247 VPS8Q8N3P4 1428 aa21.51■■□□□ 1.03
SMIM13-202ENST00000416247 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
SMIM13-202ENST00000416247 KNSTRNQ9Y448 316 aa21.46■■□□□ 1.03
SMIM13-202ENST00000416247 ARID4BQ4LE39 1312 aaPredicted RBP21.46■■□□□ 1.03
SMIM13-202ENST00000416247 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
SMIM13-202ENST00000416247 C14orf37Q86TY3 774 aa21.43■■□□□ 1.02
SMIM13-202ENST00000416247 CDCA8Q53HL2 280 aa21.43■■□□□ 1.02
SMIM13-202ENST00000416247 WIZO95785 1651 aa21.4■■□□□ 1.02
SMIM13-202ENST00000416247 ZBTB7CA1YPR0 619 aa21.4■■□□□ 1.02
SMIM13-202ENST00000416247 SUPT16HQ9Y5B9 1047 aaKnown RBP21.39■■□□□ 1.02
SMIM13-202ENST00000416247 DCAF11Q8TEB1 546 aa21.39■■□□□ 1.01
SMIM13-202ENST00000416247 PPM1GO15355 546 aaPredicted RBP21.38■■□□□ 1.01
SMIM13-202ENST00000416247 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
SMIM13-202ENST00000416247 NEUROD2Q15784 382 aa21.35■■□□□ 1.01
SMIM13-202ENST00000416247 CFAP53Q96M91 514 aa21.35■■□□□ 1.01
SMIM13-202ENST00000416247 FOXD1Q16676 465 aa21.34■■□□□ 1.01
SMIM13-202ENST00000416247 SETD5Q9C0A6 1442 aa21.33■■□□□ 1.01
SMIM13-202ENST00000416247 NBR1Q14596 966 aa21.33■■□□□ 1
SMIM13-202ENST00000416247 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
SMIM13-202ENST00000416247 ARHGAP35Q9NRY4 1499 aa21.31■■□□□ 1
SMIM13-202ENST00000416247 TNNT2P45379 298 aaPredicted RBP21.31■■□□□ 1
SMIM13-202ENST00000416247 A0A0G2JS52 829 aa21.29■■□□□ 1
SMIM13-202ENST00000416247 POGKQ9P215 609 aa21.29■■□□□ 1
SMIM13-202ENST00000416247 TIMELESSQ9UNS1 1208 aa21.29■■□□□ 1
SMIM13-202ENST00000416247 CC2D1BQ5T0F9 858 aaKnown RBP21.29■■□□□ 1
SMIM13-202ENST00000416247 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
SMIM13-202ENST00000416247 PKD2Q13563 968 aa21.28■■□□□ 1
SMIM13-202ENST00000416247 MYH16Q9H6N6 1097 aa21.27■■□□□ 1
SMIM13-202ENST00000416247 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
SMIM13-202ENST00000416247 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
SMIM13-202ENST00000416247 FMN1Q68DA7 1419 aa21.23■□□□□ 0.99
SMIM13-202ENST00000416247 CARMIL2Q6F5E8 1435 aa21.23■□□□□ 0.99
SMIM13-202ENST00000416247 MLECQ14165 292 aa21.23■□□□□ 0.99
SMIM13-202ENST00000416247 GGT6Q6P531 493 aa21.22■□□□□ 0.99
SMIM13-202ENST00000416247 HSPA5P11021 654 aaKnown RBP21.21■□□□□ 0.99
SMIM13-202ENST00000416247 ANP32BQ92688 251 aaKnown RBP21.2■□□□□ 0.99
SMIM13-202ENST00000416247 TMF1P82094 1093 aa21.2■□□□□ 0.98
SMIM13-202ENST00000416247 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.98
SMIM13-202ENST00000416247 ARXQ96QS3 562 aa21.19■□□□□ 0.98
SMIM13-202ENST00000416247 FHOD3Q2V2M9 1422 aa21.19■□□□□ 0.98
SMIM13-202ENST00000416247 MPHOSPH9Q99550 1183 aa21.17■□□□□ 0.98
SMIM13-202ENST00000416247 MAPK8IP3Q9UPT6 1336 aa21.17■□□□□ 0.98
SMIM13-202ENST00000416247 LAS1LQ9Y4W2 734 aaKnown RBP21.16■□□□□ 0.98
SMIM13-202ENST00000416247 KANK1Q14678 1352 aa21.16■□□□□ 0.98
SMIM13-202ENST00000416247 NUDCQ9Y266 331 aa21.16■□□□□ 0.98
SMIM13-202ENST00000416247 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
SMIM13-202ENST00000416247 SAFB2Q14151 953 aaKnown RBP eCLIP21.16■□□□□ 0.98
SMIM13-202ENST00000416247 LMOD2Q6P5Q4 547 aa21.14■□□□□ 0.98
SMIM13-202ENST00000416247 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.98
SMIM13-202ENST00000416247 NUP155O75694 1391 aa21.13■□□□□ 0.97
SMIM13-202ENST00000416247 FTSJ3Q8IY81 847 aaKnown RBP21.13■□□□□ 0.97
SMIM13-202ENST00000416247 FRAT1Q92837 279 aaPredicted RBP21.12■□□□□ 0.97
SMIM13-202ENST00000416247 EFCAB2Q5VUJ9 269 aa21.12■□□□□ 0.97
SMIM13-202ENST00000416247 HAP1P54257 671 aaPredicted RBP21.1■□□□□ 0.97
SMIM13-202ENST00000416247 SRPK2P78362 688 aaKnown RBP21.08■□□□□ 0.97
SMIM13-202ENST00000416247 SMARCA4P51532 1647 aa21.08■□□□□ 0.97
SMIM13-202ENST00000416247 PPP4R2Q9NY27 417 aa21.08■□□□□ 0.96
SMIM13-202ENST00000416247 B4GALNT3Q6L9W6 998 aa21.07■□□□□ 0.96
SMIM13-202ENST00000416247 JPH4Q96JJ6 628 aa21.07■□□□□ 0.96
SMIM13-202ENST00000416247 TRHP20396 242 aaPredicted RBP21.07■□□□□ 0.96
SMIM13-202ENST00000416247 HNRNPMP52272 730 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMIM13-202ENST00000416247 RGS3P49796 1198 aa21.05■□□□□ 0.96
SMIM13-202ENST00000416247 CCER2I3L3R5 266 aa21.05■□□□□ 0.96
SMIM13-202ENST00000416247 ANKRD30AQ9BXX3 1397 aa21.05■□□□□ 0.96
SMIM13-202ENST00000416247 STK26Q9P289 416 aa21.04■□□□□ 0.96
SMIM13-202ENST00000416247 SOX12O15370 315 aa21.04■□□□□ 0.96
SMIM13-202ENST00000416247 L3MBTL2Q969R5 705 aa21.04■□□□□ 0.96
SMIM13-202ENST00000416247 KIF3BO15066 747 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms