RNA–Protein interactions for RNA: ENST00000415683.2

GTF3C2-203, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-203ENST00000415683 PLCB2Q00722 1185 aa8.38□□□□□ -1.07
GTF3C2-203ENST00000415683 IFNLR1Q8IU57 520 aaPredicted RBP8.37□□□□□ -1.07
GTF3C2-203ENST00000415683 ZNF692Q9BU19 519 aaPredicted RBP8.37□□□□□ -1.07
GTF3C2-203ENST00000415683 SSUH2Q9Y2M2 353 aa8.36□□□□□ -1.07
GTF3C2-203ENST00000415683 C19orf67A6NJJ6 358 aa8.35□□□□□ -1.07
GTF3C2-203ENST00000415683 ERICH6Q7L0X2 663 aa8.34□□□□□ -1.07
GTF3C2-203ENST00000415683 NCAPD3P42695 1498 aa8.32□□□□□ -1.08
GTF3C2-203ENST00000415683 ATAD2BQ9ULI0 1458 aa8.31□□□□□ -1.08
GTF3C2-203ENST00000415683 CHADLQ6NUI6 762 aa8.3□□□□□ -1.08
GTF3C2-203ENST00000415683 GABBR2O75899 941 aa8.29□□□□□ -1.08
GTF3C2-203ENST00000415683 PKD2Q13563 968 aa8.29□□□□□ -1.08
GTF3C2-203ENST00000415683 BAZ1AQ9NRL2 1556 aaPredicted RBP8.28□□□□□ -1.08
GTF3C2-203ENST00000415683 PRKCSHP14314 528 aaPredicted RBP8.28□□□□□ -1.08
GTF3C2-203ENST00000415683 SMARCA2P51531 1590 aa8.27□□□□□ -1.09
GTF3C2-203ENST00000415683 BAZ1BQ9UIG0 1483 aaKnown RBP8.26□□□□□ -1.09
GTF3C2-203ENST00000415683 SMARCA4P51532 1647 aa8.25□□□□□ -1.09
GTF3C2-203ENST00000415683 PRR29P0C7W0 189 aa8.25□□□□□ -1.09
GTF3C2-203ENST00000415683 ERCC6Q03468 1493 aa8.25□□□□□ -1.09
GTF3C2-203ENST00000415683 MROH2BQ7Z745 1585 aa8.23□□□□□ -1.09
GTF3C2-203ENST00000415683 LHX8Q68G74 356 aa8.23□□□□□ -1.09
GTF3C2-203ENST00000415683 NESP48681 1621 aa8.21□□□□□ -1.1
GTF3C2-203ENST00000415683 CUX2O14529 1486 aa8.19□□□□□ -1.1
GTF3C2-203ENST00000415683 HAP1P54257 671 aaPredicted RBP8.19□□□□□ -1.1
GTF3C2-203ENST00000415683 TIMELESSQ9UNS1 1208 aa8.19□□□□□ -1.1
GTF3C2-203ENST00000415683 HMGXB3Q12766 1538 aa8.19□□□□□ -1.1
GTF3C2-203ENST00000415683 CD44P16070 742 aaKnown RBP8.17□□□□□ -1.1
GTF3C2-203ENST00000415683 SPOCK2Q92563 424 aa8.17□□□□□ -1.1
GTF3C2-203ENST00000415683 VSIG10Q8N0Z9 540 aa8.16□□□□□ -1.1
GTF3C2-203ENST00000415683 STAG3Q9UJ98 1225 aa8.16□□□□□ -1.1
GTF3C2-203ENST00000415683 RSF1Q96T23 1441 aaPredicted RBP8.15□□□□□ -1.1
GTF3C2-203ENST00000415683 PDS5BQ9NTI5 1447 aa8.13□□□□□ -1.11
GTF3C2-203ENST00000415683 CADPSQ9ULU8 1353 aa8.13□□□□□ -1.11
GTF3C2-203ENST00000415683 RANGAP1P46060 587 aaPredicted RBP8.13□□□□□ -1.11
GTF3C2-203ENST00000415683 FARP1Q9Y4F1 1045 aaPredicted RBP8.13□□□□□ -1.11
GTF3C2-203ENST00000415683 PEG3Q9GZU2 1588 aa8.13□□□□□ -1.11
GTF3C2-203ENST00000415683 BBXQ8WY36 941 aaPredicted RBP8.12□□□□□ -1.11
GTF3C2-203ENST00000415683 TAOK2Q9UL54 1235 aa8.12□□□□□ -1.11
GTF3C2-203ENST00000415683 POTEIP0CG38 1075 aa8.11□□□□□ -1.11
GTF3C2-203ENST00000415683 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
GTF3C2-203ENST00000415683 BCANQ96GW7 911 aa8.11□□□□□ -1.11
GTF3C2-203ENST00000415683 ECM2O94769 699 aaPredicted RBP8.1□□□□□ -1.11
GTF3C2-203ENST00000415683 KLHL34Q8N239 644 aa8.1□□□□□ -1.11
GTF3C2-203ENST00000415683 TRIM41Q8WV44 630 aa8.1□□□□□ -1.11
GTF3C2-203ENST00000415683 WIZO95785 1651 aa8.09□□□□□ -1.11
GTF3C2-203ENST00000415683 SUPT5HO00267 1087 aaKnown RBP8.09□□□□□ -1.11
GTF3C2-203ENST00000415683 NPM1P06748 294 aaKnown RBP eCLIP8.07□□□□□ -1.12
GTF3C2-203ENST00000415683 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.07□□□□□ -1.12
GTF3C2-203ENST00000415683 CLCN6P51797 869 aa8.06□□□□□ -1.12
GTF3C2-203ENST00000415683 LAMC3Q9Y6N6 1575 aa8.05□□□□□ -1.12
GTF3C2-203ENST00000415683 TULP1O00294 542 aaPredicted RBP8.05□□□□□ -1.12
GTF3C2-203ENST00000415683 DCBLD2Q96PD2 775 aa8.04□□□□□ -1.12
GTF3C2-203ENST00000415683 THOC2Q8NI27 1593 aaKnown RBP8.03□□□□□ -1.12
GTF3C2-203ENST00000415683 PLCD3Q8N3E9 789 aa8.03□□□□□ -1.12
GTF3C2-203ENST00000415683 RGL2O15211 777 aa8.02□□□□□ -1.13
GTF3C2-203ENST00000415683 KDM2AQ9Y2K7 1162 aa8.02□□□□□ -1.13
GTF3C2-203ENST00000415683 TOP2AP11388 1531 aaKnown RBP8.02□□□□□ -1.13
GTF3C2-203ENST00000415683 FANCD2Q9BXW9 1451 aa8.01□□□□□ -1.13
GTF3C2-203ENST00000415683 ZNF579Q8NAF0 562 aaKnown RBP8.01□□□□□ -1.13
GTF3C2-203ENST00000415683 ZRANB1Q9UGI0 708 aa8.01□□□□□ -1.13
GTF3C2-203ENST00000415683 PAXIP1Q6ZW49 1069 aaPredicted RBP8□□□□□ -1.13
GTF3C2-203ENST00000415683 CCDC88BA6NC98 1476 aa8□□□□□ -1.13
GTF3C2-203ENST00000415683 CFTRP13569 1480 aa8□□□□□ -1.13
GTF3C2-203ENST00000415683 MRC2Q9UBG0 1479 aa8□□□□□ -1.13
GTF3C2-203ENST00000415683 CEP164Q9UPV0 1460 aa8□□□□□ -1.13
GTF3C2-203ENST00000415683 MIER1Q8N108 512 aa7.99□□□□□ -1.13
GTF3C2-203ENST00000415683 KIF21AQ7Z4S6 1674 aa7.98□□□□□ -1.13
GTF3C2-203ENST00000415683 CREBZFQ9NS37 354 aa7.97□□□□□ -1.13
GTF3C2-203ENST00000415683 ZBTB47Q9UFB7 747 aaPredicted RBP7.97□□□□□ -1.13
GTF3C2-203ENST00000415683 CFAP44Q96MT7 982 aa7.96□□□□□ -1.14
GTF3C2-203ENST00000415683 SPRYD3Q8NCJ5 442 aa7.95□□□□□ -1.14
GTF3C2-203ENST00000415683 PLSCR2Q9NRY7 297 aa7.95□□□□□ -1.14
GTF3C2-203ENST00000415683 GALR2O43603 387 aaPredicted RBP7.94□□□□□ -1.14
GTF3C2-203ENST00000415683 TPRNQ4KMQ1 711 aa7.93□□□□□ -1.14
GTF3C2-203ENST00000415683 PLEKHG5O94827 1062 aa7.92□□□□□ -1.14
GTF3C2-203ENST00000415683 PAK3O75914 559 aaPredicted RBP7.9□□□□□ -1.14
GTF3C2-203ENST00000415683 CIZ1Q9ULV3 898 aaPredicted RBP7.9□□□□□ -1.14
GTF3C2-203ENST00000415683 WDR62O43379 1518 aa7.89□□□□□ -1.15
GTF3C2-203ENST00000415683 PHF12Q96QT6 1004 aa7.89□□□□□ -1.15
GTF3C2-203ENST00000415683 TSHZ2Q9NRE2 1034 aa7.89□□□□□ -1.15
GTF3C2-203ENST00000415683 URB2Q14146 1524 aaKnown RBP7.88□□□□□ -1.15
GTF3C2-203ENST00000415683 CHGAP10645 457 aaKnown RBP7.88□□□□□ -1.15
GTF3C2-203ENST00000415683 HS6ST3Q8IZP7 471 aa7.88□□□□□ -1.15
GTF3C2-203ENST00000415683 GTF3C3Q9Y5Q9 886 aa7.87□□□□□ -1.15
GTF3C2-203ENST00000415683 ABCC8Q09428 1581 aa7.86□□□□□ -1.15
GTF3C2-203ENST00000415683 OTUD5Q96G74 571 aa7.86□□□□□ -1.15
GTF3C2-203ENST00000415683 EIF5BO60841 1220 aaKnown RBP7.85□□□□□ -1.15
GTF3C2-203ENST00000415683 PODXL2Q9NZ53 605 aa7.85□□□□□ -1.15
GTF3C2-203ENST00000415683 IFT140Q96RY7 1462 aa7.84□□□□□ -1.15
GTF3C2-203ENST00000415683 POTEB2H3BUK9 544 aa7.84□□□□□ -1.15
GTF3C2-203ENST00000415683 GSE1Q14687 1217 aa7.84□□□□□ -1.15
GTF3C2-203ENST00000415683 TOPBP1Q92547 1522 aa7.83□□□□□ -1.16
GTF3C2-203ENST00000415683 RNF25Q96BH1 459 aaPredicted RBP7.83□□□□□ -1.16
GTF3C2-203ENST00000415683 SOGA1O94964 1423 aa7.82□□□□□ -1.16
GTF3C2-203ENST00000415683 NUBP1P53384 320 aa7.82□□□□□ -1.16
GTF3C2-203ENST00000415683 TDRD9Q8NDG6 1382 aaKnown RBP7.82□□□□□ -1.16
GTF3C2-203ENST00000415683 CHMP7Q8WUX9 453 aaPredicted RBP7.81□□□□□ -1.16
GTF3C2-203ENST00000415683 AQRO60306 1485 aaKnown RBP eCLIP7.81□□□□□ -1.161e-6■■□□□ 13.7
GTF3C2-203ENST00000415683 ZNF608Q9ULD9 1512 aaPredicted RBP7.8□□□□□ -1.16
GTF3C2-203ENST00000415683 MNX1P50219 401 aaPredicted RBP7.79□□□□□ -1.16
GTF3C2-203ENST00000415683 CYB5RLQ6IPT4 315 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms