RNA–Protein interactions for RNA: ENST00000414773.5

CLGN-202, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 2,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-202ENST00000414773 VPS8Q8N3P4 1428 aa17.19■□□□□ 0.34
CLGN-202ENST00000414773 PCGF6Q9BYE7 350 aa17.16■□□□□ 0.34
CLGN-202ENST00000414773 MAGI1Q96QZ7 1491 aaPredicted RBP17.14■□□□□ 0.33
CLGN-202ENST00000414773 P3H3Q8IVL6 736 aa17.12■□□□□ 0.33
CLGN-202ENST00000414773 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
CLGN-202ENST00000414773 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
CLGN-202ENST00000414773 FBLN2P98095 1184 aa17.11■□□□□ 0.33
CLGN-202ENST00000414773 CHMP7Q8WUX9 453 aaPredicted RBP17.11■□□□□ 0.33
CLGN-202ENST00000414773 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
CLGN-202ENST00000414773 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
CLGN-202ENST00000414773 EFCAB5A4FU69 1503 aa17.06■□□□□ 0.32
CLGN-202ENST00000414773 FHOD3Q2V2M9 1422 aa17.06■□□□□ 0.32
CLGN-202ENST00000414773 APLP2Q06481 763 aa17.05■□□□□ 0.32
CLGN-202ENST00000414773 IQGAP2Q13576 1575 aa17.05■□□□□ 0.32
CLGN-202ENST00000414773 SAMD9Q5K651 1589 aa17.01■□□□□ 0.31
CLGN-202ENST00000414773 KIAA0586Q9BVV6 1533 aa17.01■□□□□ 0.31
CLGN-202ENST00000414773 CEP170Q5SW79 1584 aa17■□□□□ 0.31
CLGN-202ENST00000414773 NUP160Q12769 1436 aa16.96■□□□□ 0.31
CLGN-202ENST00000414773 UGGT2Q9NYU1 1516 aa16.95■□□□□ 0.3
CLGN-202ENST00000414773 PCF11O94913 1555 aaKnown RBP16.95■□□□□ 0.3
CLGN-202ENST00000414773 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
CLGN-202ENST00000414773 CHD1O14646 1710 aa16.93■□□□□ 0.3
CLGN-202ENST00000414773 FMN1Q68DA7 1419 aa16.93■□□□□ 0.3
CLGN-202ENST00000414773 KANK4Q5T7N3 995 aaPredicted RBP16.92■□□□□ 0.3
CLGN-202ENST00000414773 CASKIN1Q8WXD9 1431 aa16.9■□□□□ 0.3
CLGN-202ENST00000414773 DISP1Q96F81 1524 aa16.89■□□□□ 0.29
CLGN-202ENST00000414773 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
CLGN-202ENST00000414773 JPH4Q96JJ6 628 aa16.88■□□□□ 0.29
CLGN-202ENST00000414773 KIAA0556O60303 1618 aa16.87■□□□□ 0.29
CLGN-202ENST00000414773 TIAM1Q13009 1591 aa16.87■□□□□ 0.29
CLGN-202ENST00000414773 MAP3K1Q13233 1512 aa16.84■□□□□ 0.29
CLGN-202ENST00000414773 CFAP43Q8NDM7 1665 aa16.81■□□□□ 0.28
CLGN-202ENST00000414773 CARMIL2Q6F5E8 1435 aa16.8■□□□□ 0.28
CLGN-202ENST00000414773 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
CLGN-202ENST00000414773 LRRIQ1Q96JM4 1722 aa16.78■□□□□ 0.28
CLGN-202ENST00000414773 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
CLGN-202ENST00000414773 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
CLGN-202ENST00000414773 ARID3CA6NKF2 412 aa16.75■□□□□ 0.27
CLGN-202ENST00000414773 SHROOM2Q13796 1616 aa16.71■□□□□ 0.27
CLGN-202ENST00000414773 EPRSP07814 1512 aaKnown RBP16.71■□□□□ 0.27
CLGN-202ENST00000414773 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
CLGN-202ENST00000414773 RAPGEF6Q8TEU7 1601 aa16.71■□□□□ 0.27
CLGN-202ENST00000414773 CCDC18Q5T9S5 1454 aa16.71■□□□□ 0.26
CLGN-202ENST00000414773 PLB1Q6P1J6 1458 aa16.71■□□□□ 0.26
CLGN-202ENST00000414773 MTUS2Q5JR59 1369 aa16.7■□□□□ 0.26
CLGN-202ENST00000414773 CDK13Q14004 1512 aaKnown RBP16.7■□□□□ 0.26
CLGN-202ENST00000414773 NUP153P49790 1475 aaKnown RBP16.68■□□□□ 0.26
CLGN-202ENST00000414773 PHLDB1Q86UU1 1377 aa16.67■□□□□ 0.26
CLGN-202ENST00000414773 ERCC6L2Q5T890 1561 aa16.67■□□□□ 0.26
CLGN-202ENST00000414773 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
CLGN-202ENST00000414773 MAGI3Q5TCQ9 1506 aa16.66■□□□□ 0.26
CLGN-202ENST00000414773 PTPRGP23470 1445 aa16.66■□□□□ 0.26
CLGN-202ENST00000414773 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
CLGN-202ENST00000414773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
CLGN-202ENST00000414773 EHBP1L1Q8N3D4 1523 aa16.64■□□□□ 0.25
CLGN-202ENST00000414773 CCNB3Q8WWL7 1395 aa16.63■□□□□ 0.25
CLGN-202ENST00000414773 ABCA8O94911 1581 aa16.62■□□□□ 0.25
CLGN-202ENST00000414773 NCOA2Q15596 1464 aa16.6■□□□□ 0.25
CLGN-202ENST00000414773 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
CLGN-202ENST00000414773 SUPT6HQ7KZ85 1726 aaKnown RBP16.6■□□□□ 0.25
CLGN-202ENST00000414773 HRCP23327 699 aa16.59■□□□□ 0.25
CLGN-202ENST00000414773 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
CLGN-202ENST00000414773 ITGAEP38570 1179 aa16.56■□□□□ 0.24
CLGN-202ENST00000414773 FAM50AQ14320 339 aaKnown RBP16.56■□□□□ 0.24
CLGN-202ENST00000414773 UACAQ9BZF9 1416 aa16.55■□□□□ 0.24
CLGN-202ENST00000414773 ATP10BO94823 1461 aa16.55■□□□□ 0.24
CLGN-202ENST00000414773 ARHGEF11O15085 1522 aa16.54■□□□□ 0.24
CLGN-202ENST00000414773 FGD6Q6ZV73 1430 aa16.53■□□□□ 0.24
CLGN-202ENST00000414773 MYOM3Q5VTT5 1437 aa16.52■□□□□ 0.24
CLGN-202ENST00000414773 TROQ12816 1431 aaPredicted RBP16.51■□□□□ 0.23
CLGN-202ENST00000414773 PLEKHD1A6NEE1 506 aa16.49■□□□□ 0.23
CLGN-202ENST00000414773 ABCC2Q92887 1545 aa16.49■□□□□ 0.23
CLGN-202ENST00000414773 CCER1Q8TC90 406 aaPredicted RBP16.47■□□□□ 0.23
CLGN-202ENST00000414773 KIF14Q15058 1648 aa16.45■□□□□ 0.22
CLGN-202ENST00000414773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLGN-202ENST00000414773 PTPN23Q9H3S7 1636 aa16.44■□□□□ 0.22
CLGN-202ENST00000414773 ADCY10Q96PN6 1610 aa16.43■□□□□ 0.22
CLGN-202ENST00000414773 UHRF1BP1LA0JNW5 1464 aa16.42■□□□□ 0.22
CLGN-202ENST00000414773 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
CLGN-202ENST00000414773 TCOF1Q13428 1488 aaKnown RBP16.39■□□□□ 0.21
CLGN-202ENST00000414773 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
CLGN-202ENST00000414773 ZCCHC11Q5TAX3 1644 aaKnown RBP16.39■□□□□ 0.21
CLGN-202ENST00000414773 KDM5BQ9UGL1 1544 aa16.38■□□□□ 0.21
CLGN-202ENST00000414773 GPATCH8Q9UKJ3 1502 aaKnown RBP16.38■□□□□ 0.21
CLGN-202ENST00000414773 PTPRKQ15262 1439 aa16.37■□□□□ 0.21
CLGN-202ENST00000414773 ABCC10Q5T3U5 1492 aa16.37■□□□□ 0.21
CLGN-202ENST00000414773 ZEB1P37275 1124 aaPredicted RBP16.37■□□□□ 0.21
CLGN-202ENST00000414773 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
CLGN-202ENST00000414773 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
CLGN-202ENST00000414773 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
CLGN-202ENST00000414773 KCNH8Q96L42 1107 aa16.33■□□□□ 0.21
CLGN-202ENST00000414773 ZNF777Q9ULD5 760 aaPredicted RBP16.33■□□□□ 0.21
CLGN-202ENST00000414773 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
CLGN-202ENST00000414773 RAB3GAP2Q9H2M9 1393 aa16.33■□□□□ 0.2
CLGN-202ENST00000414773 CDC42BPAQ5VT25 1732 aa16.32■□□□□ 0.2
CLGN-202ENST00000414773 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
CLGN-202ENST00000414773 CAMSAP2Q08AD1 1489 aa16.3■□□□□ 0.2
CLGN-202ENST00000414773 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLGN-202ENST00000414773 TTC37Q6PGP7 1564 aa16.28■□□□□ 0.2
CLGN-202ENST00000414773 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms