RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 NACADO15069 1562 aa13.49□□□□□ -0.25
LINC00343-201ENST00000414368 RB1CC1Q8TDY2 1594 aa13.48□□□□□ -0.25
LINC00343-201ENST00000414368 POTEJP0CG39 1038 aa13.45□□□□□ -0.26
LINC00343-201ENST00000414368 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
LINC00343-201ENST00000414368 METRNQ9UJH8 293 aa13.45□□□□□ -0.26
LINC00343-201ENST00000414368 PAK3O75914 559 aaPredicted RBP13.44□□□□□ -0.26
LINC00343-201ENST00000414368 DCAF1Q9Y4B6 1507 aa13.42□□□□□ -0.26
LINC00343-201ENST00000414368 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
LINC00343-201ENST00000414368 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
LINC00343-201ENST00000414368 C7P10643 843 aa13.4□□□□□ -0.26
LINC00343-201ENST00000414368 SLC39A7Q92504 469 aa13.39□□□□□ -0.27
LINC00343-201ENST00000414368 SCUBE2Q9NQ36 999 aa13.36□□□□□ -0.27
LINC00343-201ENST00000414368 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
LINC00343-201ENST00000414368 CDAN1Q8IWY9 1227 aa13.31□□□□□ -0.28
LINC00343-201ENST00000414368 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
LINC00343-201ENST00000414368 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
LINC00343-201ENST00000414368 MS4A3Q96HJ5 214 aa13.23□□□□□ -0.29
LINC00343-201ENST00000414368 STAG3Q9UJ98 1225 aa13.23□□□□□ -0.29
LINC00343-201ENST00000414368 FKBP8Q14318 412 aa13.22□□□□□ -0.29
LINC00343-201ENST00000414368 SCRIBQ14160 1630 aa13.2□□□□□ -0.3
LINC00343-201ENST00000414368 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00343-201ENST00000414368 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
LINC00343-201ENST00000414368 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
LINC00343-201ENST00000414368 MMRN1Q13201 1228 aa13.06□□□□□ -0.32
LINC00343-201ENST00000414368 POTEFA5A3E0 1075 aa13.05□□□□□ -0.32
LINC00343-201ENST00000414368 SHROOM4Q9ULL8 1493 aa13.03□□□□□ -0.32
LINC00343-201ENST00000414368 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
LINC00343-201ENST00000414368 SPNS2Q8IVW8 549 aa12.99□□□□□ -0.33
LINC00343-201ENST00000414368 ST18O60284 1047 aa12.95□□□□□ -0.34
LINC00343-201ENST00000414368 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
LINC00343-201ENST00000414368 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
LINC00343-201ENST00000414368 SEC24BO95487 1268 aa12.92□□□□□ -0.34
LINC00343-201ENST00000414368 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
LINC00343-201ENST00000414368 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
LINC00343-201ENST00000414368 SLAIN1Q8ND83 568 aa12.86□□□□□ -0.35
LINC00343-201ENST00000414368 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
LINC00343-201ENST00000414368 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
LINC00343-201ENST00000414368 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
LINC00343-201ENST00000414368 TIE1P35590 1138 aa12.83□□□□□ -0.36
LINC00343-201ENST00000414368 TMEM121BQ9BXQ6 578 aaPredicted RBP12.74□□□□□ -0.37
LINC00343-201ENST00000414368 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
LINC00343-201ENST00000414368 TTLL13PA6NNM8 815 aa12.73□□□□□ -0.37
LINC00343-201ENST00000414368 MAP3K13O43283 966 aa12.73□□□□□ -0.37
LINC00343-201ENST00000414368 IER5LQ5T953 404 aa12.72□□□□□ -0.37
LINC00343-201ENST00000414368 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
LINC00343-201ENST00000414368 CECR2Q9BXF3 1484 aa12.71□□□□□ -0.38
LINC00343-201ENST00000414368 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
LINC00343-201ENST00000414368 TRIM35Q9UPQ4 493 aa12.67□□□□□ -0.38
LINC00343-201ENST00000414368 PROM2Q8N271 834 aa12.65□□□□□ -0.38
LINC00343-201ENST00000414368 MARVELD3Q96A59 401 aa12.65□□□□□ -0.38
LINC00343-201ENST00000414368 SNPHO15079 494 aa12.63□□□□□ -0.39
LINC00343-201ENST00000414368 SMARCA4P51532 1647 aa12.6□□□□□ -0.39
LINC00343-201ENST00000414368 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
LINC00343-201ENST00000414368 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
LINC00343-201ENST00000414368 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
LINC00343-201ENST00000414368 PLCG2P16885 1265 aa12.56□□□□□ -0.4
LINC00343-201ENST00000414368 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
LINC00343-201ENST00000414368 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
LINC00343-201ENST00000414368 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
LINC00343-201ENST00000414368 EMP3P54852 163 aa12.48□□□□□ -0.41
LINC00343-201ENST00000414368 SGIP1Q9BQI5 828 aa12.48□□□□□ -0.41
LINC00343-201ENST00000414368 KRTAP3-3Q9BYR6 98 aa12.48□□□□□ -0.41
LINC00343-201ENST00000414368 KRTAP3-2Q9BYR7 98 aa12.48□□□□□ -0.41
LINC00343-201ENST00000414368 PCDHB13Q9Y5F0 798 aa12.48□□□□□ -0.41
LINC00343-201ENST00000414368 RASEFQ8IZ41 740 aa12.47□□□□□ -0.41
LINC00343-201ENST00000414368 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
LINC00343-201ENST00000414368 RSF1Q96T23 1441 aaPredicted RBP12.46□□□□□ -0.41
LINC00343-201ENST00000414368 WIZO95785 1651 aa12.46□□□□□ -0.41
LINC00343-201ENST00000414368 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.46□□□□□ -0.41
LINC00343-201ENST00000414368 NCAPD3P42695 1498 aa12.46□□□□□ -0.42
LINC00343-201ENST00000414368 PEG3Q9GZU2 1588 aa12.44□□□□□ -0.42
LINC00343-201ENST00000414368 IRX5P78411 483 aaPredicted RBP12.43□□□□□ -0.42
LINC00343-201ENST00000414368 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
LINC00343-201ENST00000414368 HS3ST6Q96QI5 342 aa12.41□□□□□ -0.42
LINC00343-201ENST00000414368 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.43
LINC00343-201ENST00000414368 POTEB3A0JP26 581 aa12.39□□□□□ -0.43
LINC00343-201ENST00000414368 POTEBQ6S5H4 581 aa12.39□□□□□ -0.43
LINC00343-201ENST00000414368 HMGXB3Q12766 1538 aa12.38□□□□□ -0.43
LINC00343-201ENST00000414368 FAM205CA6NFA0 338 aa12.38□□□□□ -0.43
LINC00343-201ENST00000414368 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
LINC00343-201ENST00000414368 OCEL1Q9H607 264 aa12.38□□□□□ -0.43
LINC00343-201ENST00000414368 IFNL1Q8IU54 200 aa12.36□□□□□ -0.43
LINC00343-201ENST00000414368 SUPT5HO00267 1087 aaKnown RBP12.32□□□□□ -0.44
LINC00343-201ENST00000414368 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
LINC00343-201ENST00000414368 MIER1Q8N108 512 aa12.29□□□□□ -0.44
LINC00343-201ENST00000414368 PLCD3Q8N3E9 789 aa12.29□□□□□ -0.44
LINC00343-201ENST00000414368 TOP2AP11388 1531 aaKnown RBP12.28□□□□□ -0.44
LINC00343-201ENST00000414368 KLHL34Q8N239 644 aa12.27□□□□□ -0.45
LINC00343-201ENST00000414368 RNF166Q96A37 237 aaPredicted RBP12.26□□□□□ -0.45
LINC00343-201ENST00000414368 C3orf67Q6ZVT6 689 aa12.23□□□□□ -0.45
LINC00343-201ENST00000414368 NESP48681 1621 aa12.19□□□□□ -0.46
LINC00343-201ENST00000414368 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
LINC00343-201ENST00000414368 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
LINC00343-201ENST00000414368 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
LINC00343-201ENST00000414368 L3MBTL3Q96JM7 780 aaPredicted RBP12.12□□□□□ -0.47
LINC00343-201ENST00000414368 MYT1LQ9UL68 1186 aa12.12□□□□□ -0.47
LINC00343-201ENST00000414368 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
LINC00343-201ENST00000414368 NUBP1P53384 320 aa12.1□□□□□ -0.47
LINC00343-201ENST00000414368 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
LINC00343-201ENST00000414368 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms