RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 EIF4G2P78344 907 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMARCA4-202ENST00000413806 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.53
SMARCA4-202ENST00000413806 STAG3Q9UJ98 1225 aa18.33■□□□□ 0.53
SMARCA4-202ENST00000413806 ARXQ96QS3 562 aa18.33■□□□□ 0.52
SMARCA4-202ENST00000413806 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
SMARCA4-202ENST00000413806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.3■□□□□ 0.522e-8■■■□□ 18
SMARCA4-202ENST00000413806 KIF27Q86VH2 1401 aa18.3■□□□□ 0.52
SMARCA4-202ENST00000413806 HSP90AA1P07900 732 aaKnown RBP18.29■□□□□ 0.52
SMARCA4-202ENST00000413806 CHMP7Q8WUX9 453 aaPredicted RBP18.26■□□□□ 0.51
SMARCA4-202ENST00000413806 SALL2Q9Y467 1007 aaPredicted RBP18.26■□□□□ 0.51
SMARCA4-202ENST00000413806 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
SMARCA4-202ENST00000413806 TNNT2P45379 298 aaPredicted RBP18.25■□□□□ 0.51
SMARCA4-202ENST00000413806 KDM2AQ9Y2K7 1162 aa18.25■□□□□ 0.51
SMARCA4-202ENST00000413806 RRP7BPQ9NSQ0 103 aa18.23■□□□□ 0.51
SMARCA4-202ENST00000413806 RTN4Q9NQC3 1192 aaKnown RBP18.21■□□□□ 0.51
SMARCA4-202ENST00000413806 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
SMARCA4-202ENST00000413806 PLEKHD1A6NEE1 506 aa18.15■□□□□ 0.5
SMARCA4-202ENST00000413806 TRIM44Q96DX7 344 aaPredicted RBP18.13■□□□□ 0.49
SMARCA4-202ENST00000413806 ERICH6BQ5W0A0 696 aa18.12■□□□□ 0.49
SMARCA4-202ENST00000413806 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
SMARCA4-202ENST00000413806 NAP1L5Q96NT1 182 aaPredicted RBP18.11■□□□□ 0.49
SMARCA4-202ENST00000413806 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
SMARCA4-202ENST00000413806 CDCA8Q53HL2 280 aa18.09■□□□□ 0.49
SMARCA4-202ENST00000413806 FHAD1B1AJZ9 1412 aa18.08■□□□□ 0.49
SMARCA4-202ENST00000413806 MYH16Q9H6N6 1097 aa18.07■□□□□ 0.48
SMARCA4-202ENST00000413806 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
SMARCA4-202ENST00000413806 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
SMARCA4-202ENST00000413806 BECN1Q14457 450 aa18.02■□□□□ 0.48
SMARCA4-202ENST00000413806 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.48
SMARCA4-202ENST00000413806 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
SMARCA4-202ENST00000413806 CDK11BP21127 795 aaKnown RBP18■□□□□ 0.47
SMARCA4-202ENST00000413806 CARD11Q9BXL7 1154 aa18■□□□□ 0.47
SMARCA4-202ENST00000413806 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
SMARCA4-202ENST00000413806 PPM1GO15355 546 aaPredicted RBP17.99■□□□□ 0.47
SMARCA4-202ENST00000413806 KNSTRNQ9Y448 316 aa17.98■□□□□ 0.47
SMARCA4-202ENST00000413806 DEKP35659 375 aaKnown RBP17.98■□□□□ 0.47
SMARCA4-202ENST00000413806 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
SMARCA4-202ENST00000413806 SOGA1O94964 1423 aa17.96■□□□□ 0.46
SMARCA4-202ENST00000413806 RGL3Q3MIN7 710 aa17.95■□□□□ 0.46
SMARCA4-202ENST00000413806 SUPT16HQ9Y5B9 1047 aaKnown RBP17.95■□□□□ 0.46
SMARCA4-202ENST00000413806 VPS8Q8N3P4 1428 aa17.95■□□□□ 0.46
SMARCA4-202ENST00000413806 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
SMARCA4-202ENST00000413806 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
SMARCA4-202ENST00000413806 PPP4R2Q9NY27 417 aa17.94■□□□□ 0.46
SMARCA4-202ENST00000413806 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
SMARCA4-202ENST00000413806 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
SMARCA4-202ENST00000413806 CUX2O14529 1486 aa17.91■□□□□ 0.46
SMARCA4-202ENST00000413806 PPP1R15AO75807 674 aaPredicted RBP17.9■□□□□ 0.46
SMARCA4-202ENST00000413806 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
SMARCA4-202ENST00000413806 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
SMARCA4-202ENST00000413806 CCER2I3L3R5 266 aa17.88■□□□□ 0.45
SMARCA4-202ENST00000413806 CCDC88BA6NC98 1476 aa17.87■□□□□ 0.45
SMARCA4-202ENST00000413806 ARHGAP35Q9NRY4 1499 aa17.87■□□□□ 0.45
SMARCA4-202ENST00000413806 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
SMARCA4-202ENST00000413806 DNTTIP2Q5QJE6 756 aaKnown RBP17.85■□□□□ 0.45
SMARCA4-202ENST00000413806 GOLGA6L22H0YM25 854 aa17.85■□□□□ 0.45
SMARCA4-202ENST00000413806 PTMAP06454 111 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-202ENST00000413806 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
SMARCA4-202ENST00000413806 EIF4G1Q04637 1599 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-202ENST00000413806 NCLP19338 710 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-202ENST00000413806 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
SMARCA4-202ENST00000413806 FTSJ3Q8IY81 847 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-202ENST00000413806 NUDCQ9Y266 331 aa17.8■□□□□ 0.44
SMARCA4-202ENST00000413806 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
SMARCA4-202ENST00000413806 CASC1Q6TDU7 716 aa17.79■□□□□ 0.44
SMARCA4-202ENST00000413806 MAPK8IP3Q9UPT6 1336 aa17.79■□□□□ 0.44
SMARCA4-202ENST00000413806 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
SMARCA4-202ENST00000413806 ERCC6Q03468 1493 aa17.78■□□□□ 0.44
SMARCA4-202ENST00000413806 TMF1P82094 1093 aa17.77■□□□□ 0.44
SMARCA4-202ENST00000413806 CHMP4BQ9H444 224 aaKnown RBP17.77■□□□□ 0.44
SMARCA4-202ENST00000413806 MS4A1P11836 297 aa17.77■□□□□ 0.44
SMARCA4-202ENST00000413806 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.43
SMARCA4-202ENST00000413806 KANK1Q14678 1352 aa17.74■□□□□ 0.43
SMARCA4-202ENST00000413806 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-202ENST00000413806 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
SMARCA4-202ENST00000413806 CC2D1BQ5T0F9 858 aaKnown RBP17.72■□□□□ 0.43
SMARCA4-202ENST00000413806 C14orf37Q86TY3 774 aa17.72■□□□□ 0.43
SMARCA4-202ENST00000413806 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
SMARCA4-202ENST00000413806 HSPA5P11021 654 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-202ENST00000413806 RBM19Q9Y4C8 960 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-202ENST00000413806 SENP3-EIF4A1A0A087X0R7 540 aa17.69■□□□□ 0.42
SMARCA4-202ENST00000413806 POGKQ9P215 609 aa17.69■□□□□ 0.42
SMARCA4-202ENST00000413806 KANK4Q5T7N3 995 aaPredicted RBP17.69■□□□□ 0.42
SMARCA4-202ENST00000413806 ZBTB7CA1YPR0 619 aa17.69■□□□□ 0.42
SMARCA4-202ENST00000413806 RAB3GAP2Q9H2M9 1393 aa17.68■□□□□ 0.42
SMARCA4-202ENST00000413806 NEUROD2Q15784 382 aa17.68■□□□□ 0.42
SMARCA4-202ENST00000413806 L1TD1Q5T7N2 865 aaKnown RBP17.68■□□□□ 0.42
SMARCA4-202ENST00000413806 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
SMARCA4-202ENST00000413806 RGS3P49796 1198 aa17.65■□□□□ 0.42
SMARCA4-202ENST00000413806 B4GALNT3Q6L9W6 998 aa17.65■□□□□ 0.42
SMARCA4-202ENST00000413806 FRAT1Q92837 279 aaPredicted RBP17.65■□□□□ 0.42
SMARCA4-202ENST00000413806 ARID4BQ4LE39 1312 aaPredicted RBP17.64■□□□□ 0.41
SMARCA4-202ENST00000413806 KTN1Q86UP2 1357 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-202ENST00000413806 CARMIL2Q6F5E8 1435 aa17.63■□□□□ 0.41
SMARCA4-202ENST00000413806 WIZO95785 1651 aa17.63■□□□□ 0.41
SMARCA4-202ENST00000413806 PDS5BQ9NTI5 1447 aa17.61■□□□□ 0.41
SMARCA4-202ENST00000413806 PKD2Q13563 968 aa17.61■□□□□ 0.41
SMARCA4-202ENST00000413806 MSNP26038 577 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-202ENST00000413806 RALBP1Q15311 655 aa17.59■□□□□ 0.41
SMARCA4-202ENST00000413806 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms