RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 NOP58Q9Y2X3 529 aaKnown RBP18■□□□□ 0.47
AFF3-202ENST00000409236 DRC7Q8IY82 874 aa17.93■□□□□ 0.46
AFF3-202ENST00000409236 PLCB2Q00722 1185 aa17.92■□□□□ 0.46
AFF3-202ENST00000409236 PNNQ9H307 717 aaKnown RBP17.9■□□□□ 0.46
AFF3-202ENST00000409236 HSP90AB1P08238 724 aaKnown RBP17.89■□□□□ 0.45
AFF3-202ENST00000409236 CHMP4BQ9H444 224 aaKnown RBP17.89■□□□□ 0.45
AFF3-202ENST00000409236 GOLGA6L4A6NEF3 574 aa17.88■□□□□ 0.45
AFF3-202ENST00000409236 MRS2Q9HD23 443 aa17.88■□□□□ 0.45
AFF3-202ENST00000409236 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
AFF3-202ENST00000409236 FTSJ3Q8IY81 847 aaKnown RBP17.86■□□□□ 0.45
AFF3-202ENST00000409236 SCAF1Q9H7N4 1312 aaKnown RBP17.86■□□□□ 0.45
AFF3-202ENST00000409236 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
AFF3-202ENST00000409236 HSCBQ8IWL3 235 aa17.83■□□□□ 0.44
AFF3-202ENST00000409236 CFAP44Q96MT7 982 aa17.83■□□□□ 0.44
AFF3-202ENST00000409236 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
AFF3-202ENST00000409236 TULP1O00294 542 aaPredicted RBP17.82■□□□□ 0.44
AFF3-202ENST00000409236 SALL2Q9Y467 1007 aaPredicted RBP17.81■□□□□ 0.44
AFF3-202ENST00000409236 LAS1LQ9Y4W2 734 aaKnown RBP17.81■□□□□ 0.44
AFF3-202ENST00000409236 A0A0U1RQG5 324 aaPredicted RBP17.81■□□□□ 0.44
AFF3-202ENST00000409236 STAG3Q9UJ98 1225 aa17.8■□□□□ 0.44
AFF3-202ENST00000409236 DDX10Q13206 875 aaKnown RBP17.8■□□□□ 0.44
AFF3-202ENST00000409236 DEKP35659 375 aaKnown RBP17.79■□□□□ 0.44
AFF3-202ENST00000409236 ARID4BQ4LE39 1312 aaPredicted RBP17.78■□□□□ 0.44
AFF3-202ENST00000409236 FGD1P98174 961 aa17.78■□□□□ 0.44
AFF3-202ENST00000409236 TPRNQ4KMQ1 711 aa17.78■□□□□ 0.44
AFF3-202ENST00000409236 SYAP1Q96A49 352 aaPredicted RBP17.78■□□□□ 0.44
AFF3-202ENST00000409236 MCCP23508 829 aa17.75■□□□□ 0.43
AFF3-202ENST00000409236 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
AFF3-202ENST00000409236 CLSTN1O94985 981 aa17.73■□□□□ 0.43
AFF3-202ENST00000409236 HSP90AA2PQ14568 343 aaPredicted RBP17.72■□□□□ 0.43
AFF3-202ENST00000409236 MS4A1P11836 297 aa17.72■□□□□ 0.43
AFF3-202ENST00000409236 GBP4Q96PP9 640 aa17.72■□□□□ 0.43
AFF3-202ENST00000409236 IRX6P78412 446 aaPredicted RBP17.72■□□□□ 0.43
AFF3-202ENST00000409236 TPM4P67936 248 aa17.71■□□□□ 0.43
AFF3-202ENST00000409236 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
AFF3-202ENST00000409236 KCNJ4P48050 445 aa17.68■□□□□ 0.42
AFF3-202ENST00000409236 PPP4R2Q9NY27 417 aa17.65■□□□□ 0.42
AFF3-202ENST00000409236 GNL2Q13823 731 aaKnown RBP17.65■□□□□ 0.42
AFF3-202ENST00000409236 PHF14O94880 888 aa17.65■□□□□ 0.42
AFF3-202ENST00000409236 CFAP53Q96M91 514 aa17.65■□□□□ 0.42
AFF3-202ENST00000409236 CCDC34Q96HJ3 373 aa17.65■□□□□ 0.42
AFF3-202ENST00000409236 GOLGA6L3A6NEY3 463 aa17.64■□□□□ 0.41
AFF3-202ENST00000409236 GPS2Q13227 327 aa17.62■□□□□ 0.41
AFF3-202ENST00000409236 NOM1Q5C9Z4 860 aaKnown RBP17.6■□□□□ 0.41
AFF3-202ENST00000409236 ARID3AQ99856 593 aa17.59■□□□□ 0.41
AFF3-202ENST00000409236 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.59■□□□□ 0.41
AFF3-202ENST00000409236 ZNF777Q9ULD5 760 aaPredicted RBP17.59■□□□□ 0.41
AFF3-202ENST00000409236 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
AFF3-202ENST00000409236 PRM3Q9NNZ6 103 aa17.58■□□□□ 0.41
AFF3-202ENST00000409236 NAP1L2Q9ULW6 460 aaPredicted RBP17.58■□□□□ 0.41
AFF3-202ENST00000409236 CSPP1Q1MSJ5 1256 aa17.57■□□□□ 0.4
AFF3-202ENST00000409236 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
AFF3-202ENST00000409236 CDCA8Q53HL2 280 aa17.56■□□□□ 0.4
AFF3-202ENST00000409236 CHGAP10645 457 aaKnown RBP17.56■□□□□ 0.4
AFF3-202ENST00000409236 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
AFF3-202ENST00000409236 RRP12Q5JTH9 1297 aaKnown RBP17.56■□□□□ 0.4
AFF3-202ENST00000409236 CCDC70Q6NSX1 233 aa17.56■□□□□ 0.4
AFF3-202ENST00000409236 TEX35Q5T0J7 233 aa17.55■□□□□ 0.4
AFF3-202ENST00000409236 APPP05067 770 aa17.54■□□□□ 0.4
AFF3-202ENST00000409236 EIF4G2P78344 907 aaKnown RBP eCLIP17.53■□□□□ 0.4
AFF3-202ENST00000409236 RGS3P49796 1198 aa17.52■□□□□ 0.4
AFF3-202ENST00000409236 A0A0G2JS52 829 aa17.52■□□□□ 0.4
AFF3-202ENST00000409236 TPM3P06753 285 aa17.52■□□□□ 0.4
AFF3-202ENST00000409236 MIER1Q8N108 512 aa17.5■□□□□ 0.39
AFF3-202ENST00000409236 KNSTRNQ9Y448 316 aa17.49■□□□□ 0.39
AFF3-202ENST00000409236 ZNF771Q7L3S4 317 aaPredicted RBP17.49■□□□□ 0.39
AFF3-202ENST00000409236 MAPK8IP3Q9UPT6 1336 aa17.48■□□□□ 0.39
AFF3-202ENST00000409236 CALD1Q05682 793 aaKnown RBP17.48■□□□□ 0.39
AFF3-202ENST00000409236 CEP89Q96ST8 783 aa17.47■□□□□ 0.39
AFF3-202ENST00000409236 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
AFF3-202ENST00000409236 KIAA1211Q6ZU35 1233 aa17.46■□□□□ 0.39
AFF3-202ENST00000409236 HMMRO75330 724 aa17.45■□□□□ 0.38
AFF3-202ENST00000409236 FBLN2P98095 1184 aa17.45■□□□□ 0.38
AFF3-202ENST00000409236 TAOK2Q9UL54 1235 aa17.44■□□□□ 0.38
AFF3-202ENST00000409236 NPHP1O15259 732 aa17.42■□□□□ 0.38
AFF3-202ENST00000409236 VSIG10Q8N0Z9 540 aa17.4■□□□□ 0.38
AFF3-202ENST00000409236 CWC15Q9P013 229 aaKnown RBP17.39■□□□□ 0.37
AFF3-202ENST00000409236 TSR1Q2NL82 804 aaKnown RBP17.38■□□□□ 0.37
AFF3-202ENST00000409236 HSP90B1P14625 803 aaKnown RBP17.38■□□□□ 0.37
AFF3-202ENST00000409236 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
AFF3-202ENST00000409236 NUDCQ9Y266 331 aa17.38■□□□□ 0.37
AFF3-202ENST00000409236 HAP1P54257 671 aaPredicted RBP17.37■□□□□ 0.37
AFF3-202ENST00000409236 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
AFF3-202ENST00000409236 MTERF4Q7Z6M4 381 aaKnown RBP17.36■□□□□ 0.37
AFF3-202ENST00000409236 C14orf37Q86TY3 774 aa17.36■□□□□ 0.37
AFF3-202ENST00000409236 GZF1Q9H116 711 aaPredicted RBP17.35■□□□□ 0.37
AFF3-202ENST00000409236 PATL2C9JE40 543 aaKnown RBP17.35■□□□□ 0.37
AFF3-202ENST00000409236 CCDC191Q8NCU4 936 aa17.35■□□□□ 0.37
AFF3-202ENST00000409236 TPM1P09493 284 aa17.34■□□□□ 0.37
AFF3-202ENST00000409236 CDR1P51861 262 aa17.34■□□□□ 0.37
AFF3-202ENST00000409236 STK11IPQ8N1F8 1099 aa17.34■□□□□ 0.37
AFF3-202ENST00000409236 FRAT1Q92837 279 aaPredicted RBP17.33■□□□□ 0.36
AFF3-202ENST00000409236 AK7Q96M32 723 aa17.33■□□□□ 0.36
AFF3-202ENST00000409236 KDM2AQ9Y2K7 1162 aa17.32■□□□□ 0.36
AFF3-202ENST00000409236 MAP7D2Q96T17 732 aa17.32■□□□□ 0.36
AFF3-202ENST00000409236 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
AFF3-202ENST00000409236 DCTN1Q14203 1278 aa17.31■□□□□ 0.36
AFF3-202ENST00000409236 ACBD3Q9H3P7 528 aa17.31■□□□□ 0.36
AFF3-202ENST00000409236 SPRYD3Q8NCJ5 442 aa17.31■□□□□ 0.36
AFF3-202ENST00000409236 GPATCH3Q96I76 525 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms