RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 RRP7BPQ9NSQ0 103 aa19.23■□□□□ 0.67
ITGA6-202ENST00000409080 FHAD1B1AJZ9 1412 aa19.22■□□□□ 0.67
ITGA6-202ENST00000409080 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
ITGA6-202ENST00000409080 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
ITGA6-202ENST00000409080 SOGA1O94964 1423 aa19.17■□□□□ 0.66
ITGA6-202ENST00000409080 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
ITGA6-202ENST00000409080 HAP1P54257 671 aaPredicted RBP19.16■□□□□ 0.66
ITGA6-202ENST00000409080 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
ITGA6-202ENST00000409080 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
ITGA6-202ENST00000409080 HDGFP51858 240 aaKnown RBP19.14■□□□□ 0.65
ITGA6-202ENST00000409080 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
ITGA6-202ENST00000409080 KANK1Q14678 1352 aa19.13■□□□□ 0.65
ITGA6-202ENST00000409080 CCDC88BA6NC98 1476 aa19.12■□□□□ 0.65
ITGA6-202ENST00000409080 BCL11AQ9H165 835 aa19.1■□□□□ 0.65
ITGA6-202ENST00000409080 CDCA8Q53HL2 280 aa19.1■□□□□ 0.65
ITGA6-202ENST00000409080 WDR43Q15061 677 aaKnown RBP eCLIP19.1■□□□□ 0.65
ITGA6-202ENST00000409080 A0A0G2JS52 829 aa19.07■□□□□ 0.64
ITGA6-202ENST00000409080 ZBTB7CA1YPR0 619 aa19.05■□□□□ 0.64
ITGA6-202ENST00000409080 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
ITGA6-202ENST00000409080 RTL5Q5HYW3 569 aaPredicted RBP19.04■□□□□ 0.64
ITGA6-202ENST00000409080 TOP2AP11388 1531 aaKnown RBP19.04■□□□□ 0.64
ITGA6-202ENST00000409080 RGL3Q3MIN7 710 aa19.04■□□□□ 0.64
ITGA6-202ENST00000409080 TDRD9Q8NDG6 1382 aaKnown RBP19.03■□□□□ 0.64
ITGA6-202ENST00000409080 EIF4G2P78344 907 aaKnown RBP eCLIP19.03■□□□□ 0.64
ITGA6-202ENST00000409080 ATAD2BQ9ULI0 1458 aa19■□□□□ 0.63
ITGA6-202ENST00000409080 ABCC8Q09428 1581 aa19■□□□□ 0.63
ITGA6-202ENST00000409080 POGKQ9P215 609 aa18.98■□□□□ 0.63
ITGA6-202ENST00000409080 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
ITGA6-202ENST00000409080 MLECQ14165 292 aa18.97■□□□□ 0.63
ITGA6-202ENST00000409080 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.97■□□□□ 0.63
ITGA6-202ENST00000409080 DDX10Q13206 875 aaKnown RBP18.96■□□□□ 0.63
ITGA6-202ENST00000409080 EFCAB2Q5VUJ9 269 aa18.96■□□□□ 0.63
ITGA6-202ENST00000409080 CFAP53Q96M91 514 aa18.95■□□□□ 0.62
ITGA6-202ENST00000409080 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
ITGA6-202ENST00000409080 FMN1Q68DA7 1419 aa18.93■□□□□ 0.62
ITGA6-202ENST00000409080 FAM9BQ8IZU0 186 aa18.92■□□□□ 0.62
ITGA6-202ENST00000409080 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
ITGA6-202ENST00000409080 HNRNPUQ00839 825 aaKnown RBP eCLIP18.88■□□□□ 0.61
ITGA6-202ENST00000409080 OSCARQ8IYS5 282 aa18.87■□□□□ 0.61
ITGA6-202ENST00000409080 FANCD2Q9BXW9 1451 aa18.87■□□□□ 0.61
ITGA6-202ENST00000409080 LMOD2Q6P5Q4 547 aa18.87■□□□□ 0.61
ITGA6-202ENST00000409080 CARD11Q9BXL7 1154 aa18.86■□□□□ 0.61
ITGA6-202ENST00000409080 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
ITGA6-202ENST00000409080 GGT6Q6P531 493 aa18.85■□□□□ 0.61
ITGA6-202ENST00000409080 MRS2Q9HD23 443 aa18.85■□□□□ 0.61
ITGA6-202ENST00000409080 MYT1Q01538 1121 aa18.84■□□□□ 0.61
ITGA6-202ENST00000409080 WIZO95785 1651 aa18.83■□□□□ 0.61
ITGA6-202ENST00000409080 ARHGAP35Q9NRY4 1499 aa18.82■□□□□ 0.6
ITGA6-202ENST00000409080 JPH4Q96JJ6 628 aa18.81■□□□□ 0.6
ITGA6-202ENST00000409080 MYH16Q9H6N6 1097 aa18.81■□□□□ 0.6
ITGA6-202ENST00000409080 RAPGEF2Q9Y4G8 1499 aa18.81■□□□□ 0.6
ITGA6-202ENST00000409080 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
ITGA6-202ENST00000409080 UPF2Q9HAU5 1272 aaKnown RBP18.8■□□□□ 0.6
ITGA6-202ENST00000409080 RSPH4AQ5TD94 716 aa18.78■□□□□ 0.6
ITGA6-202ENST00000409080 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
ITGA6-202ENST00000409080 PPM1GO15355 546 aaPredicted RBP18.75■□□□□ 0.59
ITGA6-202ENST00000409080 ANKRD30AQ9BXX3 1397 aa18.73■□□□□ 0.59
ITGA6-202ENST00000409080 VPS8Q8N3P4 1428 aa18.72■□□□□ 0.59
ITGA6-202ENST00000409080 MAPK8IP3Q9UPT6 1336 aa18.71■□□□□ 0.59
ITGA6-202ENST00000409080 ANP32AP39687 249 aaKnown RBP18.7■□□□□ 0.58
ITGA6-202ENST00000409080 CCDC18Q5T9S5 1454 aa18.7■□□□□ 0.58
ITGA6-202ENST00000409080 HSP90AA1P07900 732 aaKnown RBP18.69■□□□□ 0.58
ITGA6-202ENST00000409080 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
ITGA6-202ENST00000409080 CYB5RLQ6IPT4 315 aa18.69■□□□□ 0.58
ITGA6-202ENST00000409080 EID1Q9Y6B2 187 aa18.69■□□□□ 0.58
ITGA6-202ENST00000409080 SPAG9O60271 1321 aaKnown RBP18.68■□□□□ 0.58
ITGA6-202ENST00000409080 PTPRGP23470 1445 aa18.68■□□□□ 0.58
ITGA6-202ENST00000409080 TMF1P82094 1093 aa18.68■□□□□ 0.58
ITGA6-202ENST00000409080 DCAF11Q8TEB1 546 aa18.67■□□□□ 0.58
ITGA6-202ENST00000409080 ARXQ96QS3 562 aa18.67■□□□□ 0.58
ITGA6-202ENST00000409080 GTF3C3Q9Y5Q9 886 aa18.66■□□□□ 0.58
ITGA6-202ENST00000409080 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
ITGA6-202ENST00000409080 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
ITGA6-202ENST00000409080 KIF3BO15066 747 aa18.64■□□□□ 0.57
ITGA6-202ENST00000409080 HIRIP3Q9BW71 556 aaPredicted RBP18.63■□□□□ 0.57
ITGA6-202ENST00000409080 TIMELESSQ9UNS1 1208 aa18.62■□□□□ 0.57
ITGA6-202ENST00000409080 NPHP1O15259 732 aa18.61■□□□□ 0.57
ITGA6-202ENST00000409080 PKD2Q13563 968 aa18.6■□□□□ 0.57
ITGA6-202ENST00000409080 WASHC2CQ9Y4E1 1318 aa18.6■□□□□ 0.57
ITGA6-202ENST00000409080 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
ITGA6-202ENST00000409080 HDGFL2Q7Z4V5 671 aaPredicted RBP18.59■□□□□ 0.57
ITGA6-202ENST00000409080 SETD5Q9C0A6 1442 aa18.58■□□□□ 0.57
ITGA6-202ENST00000409080 NUP155O75694 1391 aa18.58■□□□□ 0.57
ITGA6-202ENST00000409080 FHOD3Q2V2M9 1422 aa18.57■□□□□ 0.56
ITGA6-202ENST00000409080 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
ITGA6-202ENST00000409080 FKBP8Q14318 412 aa18.54■□□□□ 0.56
ITGA6-202ENST00000409080 HNRNPMP52272 730 aaKnown RBP eCLIP18.54■□□□□ 0.561e-6■■■■□ 22.9
ITGA6-202ENST00000409080 STK26Q9P289 416 aa18.53■□□□□ 0.56
ITGA6-202ENST00000409080 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
ITGA6-202ENST00000409080 CHMP4BQ9H444 224 aaKnown RBP18.52■□□□□ 0.55
ITGA6-202ENST00000409080 SIN3AQ96ST3 1273 aa18.51■□□□□ 0.55
ITGA6-202ENST00000409080 EIF3AQ14152 1382 aaKnown RBP18.51■□□□□ 0.55
ITGA6-202ENST00000409080 AEBP2Q6ZN18 517 aaPredicted RBP18.51■□□□□ 0.55
ITGA6-202ENST00000409080 U2SURPO15042 1029 aaKnown RBP18.5■□□□□ 0.55
ITGA6-202ENST00000409080 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
ITGA6-202ENST00000409080 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
ITGA6-202ENST00000409080 EIF5BO60841 1220 aaKnown RBP18.48■□□□□ 0.55
ITGA6-202ENST00000409080 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
ITGA6-202ENST00000409080 MORC1Q86VD1 984 aa18.47■□□□□ 0.55
ITGA6-202ENST00000409080 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms