RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 CHMP4BQ9H444 224 aaKnown RBP14.1□□□□□ -0.15
LTBP1-204ENST00000407925 CHIC2Q9UKJ5 165 aa14.1□□□□□ -0.15
LTBP1-204ENST00000407925 TNNT2P45379 298 aaPredicted RBP14.08□□□□□ -0.16
LTBP1-204ENST00000407925 PPP1R15AO75807 674 aaPredicted RBP14.07□□□□□ -0.16
LTBP1-204ENST00000407925 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
LTBP1-204ENST00000407925 EEA1Q15075 1411 aa14.06□□□□□ -0.16
LTBP1-204ENST00000407925 SCRIBQ14160 1630 aa14.06□□□□□ -0.16
LTBP1-204ENST00000407925 NBR1Q14596 966 aa14.05□□□□□ -0.16
LTBP1-204ENST00000407925 CHMP7Q8WUX9 453 aaPredicted RBP14.05□□□□□ -0.16
LTBP1-204ENST00000407925 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
LTBP1-204ENST00000407925 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
LTBP1-204ENST00000407925 MS4A1P11836 297 aa14.02□□□□□ -0.16
LTBP1-204ENST00000407925 PLEKHD1A6NEE1 506 aa14.02□□□□□ -0.17
LTBP1-204ENST00000407925 PLPPR3Q6T4P5 718 aa14.02□□□□□ -0.17
LTBP1-204ENST00000407925 CLIP1P30622 1438 aa14.01□□□□□ -0.17
LTBP1-204ENST00000407925 KNSTRNQ9Y448 316 aa14□□□□□ -0.17
LTBP1-204ENST00000407925 ERICH6BQ5W0A0 696 aa13.99□□□□□ -0.17
LTBP1-204ENST00000407925 NUDCQ9Y266 331 aa13.99□□□□□ -0.17
LTBP1-204ENST00000407925 PTMAP06454 111 aaKnown RBP13.99□□□□□ -0.17
LTBP1-204ENST00000407925 ARXQ96QS3 562 aa13.98□□□□□ -0.17
LTBP1-204ENST00000407925 NRDCO43847 1150 aa13.97□□□□□ -0.17
LTBP1-204ENST00000407925 GOLGA6L6A8MZA4 724 aa13.97□□□□□ -0.17
LTBP1-204ENST00000407925 PNNQ9H307 717 aaKnown RBP13.97□□□□□ -0.17
LTBP1-204ENST00000407925 A0A0G2JS52 829 aa13.96□□□□□ -0.17
LTBP1-204ENST00000407925 C14orf37Q86TY3 774 aa13.96□□□□□ -0.17
LTBP1-204ENST00000407925 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.17
LTBP1-204ENST00000407925 MAPK8IP3Q9UPT6 1336 aa13.95□□□□□ -0.18
LTBP1-204ENST00000407925 CFAP44Q96MT7 982 aa13.94□□□□□ -0.18
LTBP1-204ENST00000407925 HAP1P54257 671 aaPredicted RBP13.93□□□□□ -0.18
LTBP1-204ENST00000407925 GOLGA3Q08378 1498 aa13.91□□□□□ -0.18
LTBP1-204ENST00000407925 ZBTB7CA1YPR0 619 aa13.9□□□□□ -0.18
LTBP1-204ENST00000407925 DNTTIP2Q5QJE6 756 aaKnown RBP13.89□□□□□ -0.19
LTBP1-204ENST00000407925 MIER1Q8N108 512 aa13.89□□□□□ -0.19
LTBP1-204ENST00000407925 RRP7BPQ9NSQ0 103 aa13.89□□□□□ -0.19
LTBP1-204ENST00000407925 ZCCHC6Q5VYS8 1495 aaKnown RBP13.89□□□□□ -0.19
LTBP1-204ENST00000407925 CFDP1Q9UEE9 299 aaPredicted RBP13.87□□□□□ -0.19
LTBP1-204ENST00000407925 CARD11Q9BXL7 1154 aa13.87□□□□□ -0.19
LTBP1-204ENST00000407925 PPP4R2Q9NY27 417 aa13.86□□□□□ -0.19
LTBP1-204ENST00000407925 L1TD1Q5T7N2 865 aaKnown RBP13.85□□□□□ -0.19
LTBP1-204ENST00000407925 IRX6P78412 446 aaPredicted RBP13.84□□□□□ -0.19
LTBP1-204ENST00000407925 HDGFP51858 240 aaKnown RBP13.84□□□□□ -0.19
LTBP1-204ENST00000407925 TIMELESSQ9UNS1 1208 aa13.83□□□□□ -0.2
LTBP1-204ENST00000407925 KCNH8Q96L42 1107 aa13.83□□□□□ -0.2
LTBP1-204ENST00000407925 RGL3Q3MIN7 710 aa13.82□□□□□ -0.2
LTBP1-204ENST00000407925 FGD1P98174 961 aa13.82□□□□□ -0.2
LTBP1-204ENST00000407925 POGKQ9P215 609 aa13.82□□□□□ -0.2
LTBP1-204ENST00000407925 KIF27Q86VH2 1401 aa13.8□□□□□ -0.2
LTBP1-204ENST00000407925 ARID4BQ4LE39 1312 aaPredicted RBP13.79□□□□□ -0.2
LTBP1-204ENST00000407925 HSP90AB1P08238 724 aaKnown RBP13.79□□□□□ -0.2
LTBP1-204ENST00000407925 MCCP23508 829 aa13.79□□□□□ -0.2
LTBP1-204ENST00000407925 CHAF1AQ13111 956 aaPredicted RBP13.79□□□□□ -0.2
LTBP1-204ENST00000407925 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
LTBP1-204ENST00000407925 GOLGA6L4A6NEF3 574 aa13.79□□□□□ -0.2
LTBP1-204ENST00000407925 KCNJ4P48050 445 aa13.78□□□□□ -0.2
LTBP1-204ENST00000407925 CHMP4AQ9BY43 222 aa13.78□□□□□ -0.2
LTBP1-204ENST00000407925 CEP162Q5TB80 1403 aa13.78□□□□□ -0.2
LTBP1-204ENST00000407925 PTMSP20962 102 aa13.77□□□□□ -0.2
LTBP1-204ENST00000407925 CEP164Q9UPV0 1460 aa13.76□□□□□ -0.21
LTBP1-204ENST00000407925 KANK1Q14678 1352 aa13.76□□□□□ -0.21
LTBP1-204ENST00000407925 TMF1P82094 1093 aa13.76□□□□□ -0.21
LTBP1-204ENST00000407925 NPHP1O15259 732 aa13.76□□□□□ -0.21
LTBP1-204ENST00000407925 GOLGA2Q08379 1002 aa13.76□□□□□ -0.21
LTBP1-204ENST00000407925 TNIKQ9UKE5 1360 aa13.75□□□□□ -0.21
LTBP1-204ENST00000407925 HSCBQ8IWL3 235 aa13.75□□□□□ -0.21
LTBP1-204ENST00000407925 HIRIP3Q9BW71 556 aaPredicted RBP13.75□□□□□ -0.21
LTBP1-204ENST00000407925 SUPT16HQ9Y5B9 1047 aaKnown RBP13.74□□□□□ -0.21
LTBP1-204ENST00000407925 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
LTBP1-204ENST00000407925 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
LTBP1-204ENST00000407925 NOP58Q9Y2X3 529 aaKnown RBP13.73□□□□□ -0.21
LTBP1-204ENST00000407925 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
LTBP1-204ENST00000407925 NAP1L5Q96NT1 182 aaPredicted RBP13.73□□□□□ -0.21
LTBP1-204ENST00000407925 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
LTBP1-204ENST00000407925 NEUROD2Q15784 382 aa13.71□□□□□ -0.21
LTBP1-204ENST00000407925 PLCB2Q00722 1185 aa13.71□□□□□ -0.21
LTBP1-204ENST00000407925 RGS3P49796 1198 aa13.7□□□□□ -0.22
LTBP1-204ENST00000407925 CALD1Q05682 793 aaKnown RBP13.7□□□□□ -0.22
LTBP1-204ENST00000407925 RB1CC1Q8TDY2 1594 aa13.7□□□□□ -0.22
LTBP1-204ENST00000407925 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
LTBP1-204ENST00000407925 CCNB3Q8WWL7 1395 aa13.69□□□□□ -0.22
LTBP1-204ENST00000407925 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
LTBP1-204ENST00000407925 U2SURPO15042 1029 aaKnown RBP13.68□□□□□ -0.22
LTBP1-204ENST00000407925 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
LTBP1-204ENST00000407925 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
LTBP1-204ENST00000407925 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
LTBP1-204ENST00000407925 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
LTBP1-204ENST00000407925 HDAC5Q9UQL6 1122 aa13.67□□□□□ -0.22
LTBP1-204ENST00000407925 CCDC180Q9P1Z9 1646 aa13.66□□□□□ -0.22
LTBP1-204ENST00000407925 NAP1L2Q9ULW6 460 aaPredicted RBP13.65□□□□□ -0.22
LTBP1-204ENST00000407925 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
LTBP1-204ENST00000407925 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
LTBP1-204ENST00000407925 BAZ1BQ9UIG0 1483 aaKnown RBP13.64□□□□□ -0.23
LTBP1-204ENST00000407925 TULP1O00294 542 aaPredicted RBP13.63□□□□□ -0.23
LTBP1-204ENST00000407925 KIAA2012Q0VF49 1180 aa13.63□□□□□ -0.23
LTBP1-204ENST00000407925 KIAA1211Q6ZU35 1233 aa13.63□□□□□ -0.23
LTBP1-204ENST00000407925 MORC1Q86VD1 984 aa13.62□□□□□ -0.23
LTBP1-204ENST00000407925 GBP4Q96PP9 640 aa13.62□□□□□ -0.23
LTBP1-204ENST00000407925 HDGFL2Q7Z4V5 671 aaPredicted RBP13.61□□□□□ -0.23
LTBP1-204ENST00000407925 SYAP1Q96A49 352 aaPredicted RBP13.61□□□□□ -0.23
LTBP1-204ENST00000407925 CC2D1BQ5T0F9 858 aaKnown RBP13.6□□□□□ -0.23
LTBP1-204ENST00000407925 GNL2Q13823 731 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms