RNA–Protein interactions for RNA: ENST00000407230.5

NCOA1-206, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 1 (best) BASIC

Gene NCOA1, Length 4,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-206ENST00000407230 GLIPR1L2Q4G1C9 344 aa7.27□□□□□ -1.25
NCOA1-206ENST00000407230 CHMP7Q8WUX9 453 aaPredicted RBP7.26□□□□□ -1.25
NCOA1-206ENST00000407230 BECN1Q14457 450 aa7.23□□□□□ -1.25
NCOA1-206ENST00000407230 SENP3Q9H4L4 574 aaPredicted RBP7.23□□□□□ -1.25
NCOA1-206ENST00000407230 DDRGK1Q96HY6 314 aa7.23□□□□□ -1.25
NCOA1-206ENST00000407230 ZBTB7CA1YPR0 619 aa7.22□□□□□ -1.25
NCOA1-206ENST00000407230 PPP1R15AO75807 674 aaPredicted RBP7.22□□□□□ -1.25
NCOA1-206ENST00000407230 RGL3Q3MIN7 710 aa7.22□□□□□ -1.25
NCOA1-206ENST00000407230 RSF1Q96T23 1441 aaPredicted RBP7.21□□□□□ -1.25
NCOA1-206ENST00000407230 SENP3-EIF4A1A0A087X0R7 540 aa7.21□□□□□ -1.25
NCOA1-206ENST00000407230 A0A0G2JS52 829 aa7.21□□□□□ -1.25
NCOA1-206ENST00000407230 KCNH8Q96L42 1107 aa7.21□□□□□ -1.25
NCOA1-206ENST00000407230 GOLGA3Q08378 1498 aa7.21□□□□□ -1.26
NCOA1-206ENST00000407230 PLEKHD1A6NEE1 506 aa7.21□□□□□ -1.26
NCOA1-206ENST00000407230 PLEKHG5O94827 1062 aa7.21□□□□□ -1.26
NCOA1-206ENST00000407230 CEP162Q5TB80 1403 aa7.21□□□□□ -1.26
NCOA1-206ENST00000407230 C14orf37Q86TY3 774 aa7.2□□□□□ -1.26
NCOA1-206ENST00000407230 CFAP53Q96M91 514 aa7.2□□□□□ -1.26
NCOA1-206ENST00000407230 NCLP19338 710 aaKnown RBP7.2□□□□□ -1.26
NCOA1-206ENST00000407230 EEA1Q15075 1411 aa7.19□□□□□ -1.26
NCOA1-206ENST00000407230 GOLGA6L22H0YM25 854 aa7.19□□□□□ -1.26
NCOA1-206ENST00000407230 KNSTRNQ9Y448 316 aa7.19□□□□□ -1.26
NCOA1-206ENST00000407230 CDCA8Q53HL2 280 aa7.18□□□□□ -1.26
NCOA1-206ENST00000407230 TRIM44Q96DX7 344 aaPredicted RBP7.18□□□□□ -1.26
NCOA1-206ENST00000407230 ANP32EQ9BTT0 268 aa7.18□□□□□ -1.26
NCOA1-206ENST00000407230 SUPT16HQ9Y5B9 1047 aaKnown RBP7.18□□□□□ -1.26
NCOA1-206ENST00000407230 CDK11BP21127 795 aaKnown RBP7.18□□□□□ -1.26
NCOA1-206ENST00000407230 CARD11Q9BXL7 1154 aa7.18□□□□□ -1.26
NCOA1-206ENST00000407230 CFDP1Q9UEE9 299 aaPredicted RBP7.17□□□□□ -1.26
NCOA1-206ENST00000407230 MYO15BQ96JP2 1530 aa7.17□□□□□ -1.26
NCOA1-206ENST00000407230 PPM1GO15355 546 aaPredicted RBP7.16□□□□□ -1.26
NCOA1-206ENST00000407230 FTSJ3Q8IY81 847 aaKnown RBP7.16□□□□□ -1.26
NCOA1-206ENST00000407230 NEUROD2Q15784 382 aa7.15□□□□□ -1.26
NCOA1-206ENST00000407230 WRNQ14191 1432 aaPredicted RBP eCLIP7.15□□□□□ -1.27
NCOA1-206ENST00000407230 SIN3AQ96ST3 1273 aa7.15□□□□□ -1.27
NCOA1-206ENST00000407230 TNIKQ9UKE5 1360 aa7.14□□□□□ -1.27
NCOA1-206ENST00000407230 MAPK8IP3Q9UPT6 1336 aa7.14□□□□□ -1.27
NCOA1-206ENST00000407230 CASC1Q6TDU7 716 aa7.14□□□□□ -1.27
NCOA1-206ENST00000407230 PPP4R2Q9NY27 417 aa7.14□□□□□ -1.27
NCOA1-206ENST00000407230 PTMAP06454 111 aaKnown RBP7.13□□□□□ -1.27
NCOA1-206ENST00000407230 RGS3P49796 1198 aa7.13□□□□□ -1.27
NCOA1-206ENST00000407230 LAS1LQ9Y4W2 734 aaKnown RBP7.13□□□□□ -1.27
NCOA1-206ENST00000407230 KIF27Q86VH2 1401 aa7.13□□□□□ -1.27
NCOA1-206ENST00000407230 NUDCQ9Y266 331 aa7.13□□□□□ -1.27
NCOA1-206ENST00000407230 ZRSR1Q15695 479 aaKnown RBP7.12□□□□□ -1.27
NCOA1-206ENST00000407230 TPRNQ4KMQ1 711 aa7.12□□□□□ -1.27
NCOA1-206ENST00000407230 CEP164Q9UPV0 1460 aa7.12□□□□□ -1.27
NCOA1-206ENST00000407230 FRAT1Q92837 279 aaPredicted RBP7.12□□□□□ -1.27
NCOA1-206ENST00000407230 HAP1P54257 671 aaPredicted RBP7.11□□□□□ -1.27
NCOA1-206ENST00000407230 ARID4BQ4LE39 1312 aaPredicted RBP7.11□□□□□ -1.27
NCOA1-206ENST00000407230 POGKQ9P215 609 aa7.11□□□□□ -1.27
NCOA1-206ENST00000407230 CC2D1BQ5T0F9 858 aaKnown RBP7.1□□□□□ -1.27
NCOA1-206ENST00000407230 TNNT2P45379 298 aaPredicted RBP7.1□□□□□ -1.27
NCOA1-206ENST00000407230 DNTTIP2Q5QJE6 756 aaKnown RBP7.09□□□□□ -1.27
NCOA1-206ENST00000407230 ERICH6BQ5W0A0 696 aa7.09□□□□□ -1.27
NCOA1-206ENST00000407230 CCDC180Q9P1Z9 1646 aa7.09□□□□□ -1.27
NCOA1-206ENST00000407230 NOP58Q9Y2X3 529 aaKnown RBP7.09□□□□□ -1.27
NCOA1-206ENST00000407230 B4GALNT3Q6L9W6 998 aa7.09□□□□□ -1.28
NCOA1-206ENST00000407230 U2SURPO15042 1029 aaKnown RBP7.08□□□□□ -1.28
NCOA1-206ENST00000407230 CHMP4BQ9H444 224 aaKnown RBP7.08□□□□□ -1.28
NCOA1-206ENST00000407230 BAZ1BQ9UIG0 1483 aaKnown RBP7.08□□□□□ -1.28
NCOA1-206ENST00000407230 MS4A1P11836 297 aa7.08□□□□□ -1.28
NCOA1-206ENST00000407230 RB1CC1Q8TDY2 1594 aa7.08□□□□□ -1.28
NCOA1-206ENST00000407230 HSP90AB1P08238 724 aaKnown RBP7.07□□□□□ -1.28
NCOA1-206ENST00000407230 LMOD2Q6P5Q4 547 aa7.07□□□□□ -1.28
NCOA1-206ENST00000407230 CCNB3Q8WWL7 1395 aa7.07□□□□□ -1.28
NCOA1-206ENST00000407230 TMF1P82094 1093 aa7.06□□□□□ -1.28
NCOA1-206ENST00000407230 PLCB2Q00722 1185 aa7.06□□□□□ -1.28
NCOA1-206ENST00000407230 OS9Q13438 667 aaPredicted RBP7.06□□□□□ -1.28
NCOA1-206ENST00000407230 NAP1L5Q96NT1 182 aaPredicted RBP7.06□□□□□ -1.28
NCOA1-206ENST00000407230 DCAF11Q8TEB1 546 aa7.06□□□□□ -1.28
NCOA1-206ENST00000407230 RTN4Q9NQC3 1192 aaKnown RBP7.06□□□□□ -1.28
NCOA1-206ENST00000407230 TAOK2Q9UL54 1235 aa7.05□□□□□ -1.28
NCOA1-206ENST00000407230 FGD1P98174 961 aa7.05□□□□□ -1.28
NCOA1-206ENST00000407230 PNNQ9H307 717 aaKnown RBP7.05□□□□□ -1.28
NCOA1-206ENST00000407230 KCNJ4P48050 445 aa7.04□□□□□ -1.28
NCOA1-206ENST00000407230 FHAD1B1AJZ9 1412 aa7.04□□□□□ -1.28
NCOA1-206ENST00000407230 TIMELESSQ9UNS1 1208 aa7.04□□□□□ -1.28
NCOA1-206ENST00000407230 CCER2I3L3R5 266 aa7.03□□□□□ -1.28
NCOA1-206ENST00000407230 TULP1O00294 542 aaPredicted RBP7.03□□□□□ -1.28
NCOA1-206ENST00000407230 HSCBQ8IWL3 235 aa7.03□□□□□ -1.28
NCOA1-206ENST00000407230 MORC1Q86VD1 984 aa7.02□□□□□ -1.29
NCOA1-206ENST00000407230 NAP1L2Q9ULW6 460 aaPredicted RBP7.02□□□□□ -1.29
NCOA1-206ENST00000407230 HSPA5P11021 654 aaKnown RBP7.02□□□□□ -1.29
NCOA1-206ENST00000407230 GOLGA6L6A8MZA4 724 aa7.02□□□□□ -1.29
NCOA1-206ENST00000407230 KANK1Q14678 1352 aa7.02□□□□□ -1.29
NCOA1-206ENST00000407230 SRPK2P78362 688 aaKnown RBP7.01□□□□□ -1.29
NCOA1-206ENST00000407230 CARMIL1Q5VZK9 1371 aa7.01□□□□□ -1.29
NCOA1-206ENST00000407230 NPHP1O15259 732 aa7.01□□□□□ -1.29
NCOA1-206ENST00000407230 SOX12O15370 315 aa7.01□□□□□ -1.29
NCOA1-206ENST00000407230 GOLGA6L4A6NEF3 574 aa7.01□□□□□ -1.29
NCOA1-206ENST00000407230 SETD5Q9C0A6 1442 aa7□□□□□ -1.29
NCOA1-206ENST00000407230 NRDCO43847 1150 aa7□□□□□ -1.29
NCOA1-206ENST00000407230 SAFB2Q14151 953 aaKnown RBP eCLIP7□□□□□ -1.29
NCOA1-206ENST00000407230 MCCP23508 829 aa7□□□□□ -1.29
NCOA1-206ENST00000407230 SPRYD3Q8NCJ5 442 aa7□□□□□ -1.29
NCOA1-206ENST00000407230 EIF4G1Q04637 1599 aaKnown RBP6.99□□□□□ -1.29
NCOA1-206ENST00000407230 CUX2O14529 1486 aa6.99□□□□□ -1.29
NCOA1-206ENST00000407230 PKD2Q13563 968 aa6.99□□□□□ -1.29
NCOA1-206ENST00000407230 KTN1Q86UP2 1357 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms