RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
CACNA1C-222ENST00000406454 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
CACNA1C-222ENST00000406454 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.45
CACNA1C-222ENST00000406454 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
CACNA1C-222ENST00000406454 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
CACNA1C-222ENST00000406454 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.84■□□□□ 0.45
CACNA1C-222ENST00000406454 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
CACNA1C-222ENST00000406454 UPF2Q9HAU5 1272 aaKnown RBP17.82■□□□□ 0.44
CACNA1C-222ENST00000406454 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
CACNA1C-222ENST00000406454 CFDP1Q9UEE9 299 aaPredicted RBP17.77■□□□□ 0.44
CACNA1C-222ENST00000406454 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
CACNA1C-222ENST00000406454 HSP90AA1P07900 732 aaKnown RBP17.76■□□□□ 0.43
CACNA1C-222ENST00000406454 RGL3Q3MIN7 710 aa17.72■□□□□ 0.43
CACNA1C-222ENST00000406454 IRX6P78412 446 aaPredicted RBP17.71■□□□□ 0.43
CACNA1C-222ENST00000406454 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
CACNA1C-222ENST00000406454 PPP1R15AO75807 674 aaPredicted RBP17.65■□□□□ 0.42
CACNA1C-222ENST00000406454 ANP32BQ92688 251 aaKnown RBP17.65■□□□□ 0.42
CACNA1C-222ENST00000406454 SOGA1O94964 1423 aa17.64■□□□□ 0.41
CACNA1C-222ENST00000406454 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
CACNA1C-222ENST00000406454 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
CACNA1C-222ENST00000406454 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
CACNA1C-222ENST00000406454 CDCA8Q53HL2 280 aa17.62■□□□□ 0.41
CACNA1C-222ENST00000406454 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
CACNA1C-222ENST00000406454 FHAD1B1AJZ9 1412 aa17.61■□□□□ 0.41
CACNA1C-222ENST00000406454 CCNB3Q8WWL7 1395 aa17.6■□□□□ 0.41
CACNA1C-222ENST00000406454 CUX2O14529 1486 aa17.6■□□□□ 0.41
CACNA1C-222ENST00000406454 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.4
CACNA1C-222ENST00000406454 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
CACNA1C-222ENST00000406454 ERCC6Q03468 1493 aa17.57■□□□□ 0.4
CACNA1C-222ENST00000406454 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
CACNA1C-222ENST00000406454 NBR1Q14596 966 aa17.53■□□□□ 0.4
CACNA1C-222ENST00000406454 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
CACNA1C-222ENST00000406454 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.4
CACNA1C-222ENST00000406454 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
CACNA1C-222ENST00000406454 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
CACNA1C-222ENST00000406454 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
CACNA1C-222ENST00000406454 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
CACNA1C-222ENST00000406454 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
CACNA1C-222ENST00000406454 TIMELESSQ9UNS1 1208 aa17.48■□□□□ 0.39
CACNA1C-222ENST00000406454 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
CACNA1C-222ENST00000406454 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.39
CACNA1C-222ENST00000406454 PLEKHG5O94827 1062 aa17.43■□□□□ 0.38
CACNA1C-222ENST00000406454 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
CACNA1C-222ENST00000406454 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
CACNA1C-222ENST00000406454 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
CACNA1C-222ENST00000406454 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
CACNA1C-222ENST00000406454 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
CACNA1C-222ENST00000406454 EIF5BO60841 1220 aaKnown RBP17.4■□□□□ 0.38
CACNA1C-222ENST00000406454 POGKQ9P215 609 aa17.4■□□□□ 0.38
CACNA1C-222ENST00000406454 DCAF11Q8TEB1 546 aa17.4■□□□□ 0.38
CACNA1C-222ENST00000406454 BECN1Q14457 450 aa17.4■□□□□ 0.38
CACNA1C-222ENST00000406454 ARHGAP35Q9NRY4 1499 aa17.4■□□□□ 0.38
CACNA1C-222ENST00000406454 NEUROD2Q15784 382 aa17.39■□□□□ 0.38
CACNA1C-222ENST00000406454 NUDCQ9Y266 331 aa17.39■□□□□ 0.38
CACNA1C-222ENST00000406454 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
CACNA1C-222ENST00000406454 SMARCA2P51531 1590 aa17.38■□□□□ 0.37
CACNA1C-222ENST00000406454 ARXQ96QS3 562 aa17.38■□□□□ 0.37
CACNA1C-222ENST00000406454 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
CACNA1C-222ENST00000406454 TMF1P82094 1093 aa17.37■□□□□ 0.37
CACNA1C-222ENST00000406454 A0A0G2JS52 829 aa17.37■□□□□ 0.37
CACNA1C-222ENST00000406454 PPP4R2Q9NY27 417 aa17.36■□□□□ 0.37
CACNA1C-222ENST00000406454 FTSJ3Q8IY81 847 aaKnown RBP17.35■□□□□ 0.37
CACNA1C-222ENST00000406454 KANK1Q14678 1352 aa17.35■□□□□ 0.37
CACNA1C-222ENST00000406454 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
CACNA1C-222ENST00000406454 TNNT2P45379 298 aaPredicted RBP17.32■□□□□ 0.36
CACNA1C-222ENST00000406454 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
CACNA1C-222ENST00000406454 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
CACNA1C-222ENST00000406454 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
CACNA1C-222ENST00000406454 PKD2Q13563 968 aa17.31■□□□□ 0.36
CACNA1C-222ENST00000406454 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
CACNA1C-222ENST00000406454 CARMIL2Q6F5E8 1435 aa17.3■□□□□ 0.36
CACNA1C-222ENST00000406454 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
CACNA1C-222ENST00000406454 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
CACNA1C-222ENST00000406454 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
CACNA1C-222ENST00000406454 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
CACNA1C-222ENST00000406454 RAB3GAP2Q9H2M9 1393 aa17.27■□□□□ 0.35
CACNA1C-222ENST00000406454 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.35
CACNA1C-222ENST00000406454 GOLGA6L22H0YM25 854 aa17.24■□□□□ 0.35
CACNA1C-222ENST00000406454 FOXD1Q16676 465 aa17.24■□□□□ 0.35
CACNA1C-222ENST00000406454 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
CACNA1C-222ENST00000406454 CASC1Q6TDU7 716 aa17.24■□□□□ 0.35
CACNA1C-222ENST00000406454 ANP32EQ9BTT0 268 aa17.24■□□□□ 0.35
CACNA1C-222ENST00000406454 RGS3P49796 1198 aa17.24■□□□□ 0.35
CACNA1C-222ENST00000406454 MPHOSPH9Q99550 1183 aa17.23■□□□□ 0.35
CACNA1C-222ENST00000406454 MS4A1P11836 297 aa17.23■□□□□ 0.35
CACNA1C-222ENST00000406454 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
CACNA1C-222ENST00000406454 CHMP4BQ9H444 224 aaKnown RBP17.22■□□□□ 0.35
CACNA1C-222ENST00000406454 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
CACNA1C-222ENST00000406454 LMOD2Q6P5Q4 547 aa17.21■□□□□ 0.35
CACNA1C-222ENST00000406454 SRPK2P78362 688 aaKnown RBP17.2■□□□□ 0.34
CACNA1C-222ENST00000406454 GGT6Q6P531 493 aa17.2■□□□□ 0.34
CACNA1C-222ENST00000406454 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
CACNA1C-222ENST00000406454 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
CACNA1C-222ENST00000406454 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
CACNA1C-222ENST00000406454 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
CACNA1C-222ENST00000406454 ANKRD30AQ9BXX3 1397 aa17.19■□□□□ 0.34
CACNA1C-222ENST00000406454 NUP155O75694 1391 aa17.19■□□□□ 0.34
CACNA1C-222ENST00000406454 GLIPR1L2Q4G1C9 344 aa17.18■□□□□ 0.34
CACNA1C-222ENST00000406454 MLECQ14165 292 aa17.18■□□□□ 0.34
CACNA1C-222ENST00000406454 EFCAB2Q5VUJ9 269 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms