RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 DDRGK1Q96HY6 314 aa15.87■□□□□ 0.13
SMCR8-201ENST00000406438 MRS2Q9HD23 443 aa15.87■□□□□ 0.13
SMCR8-201ENST00000406438 CASC1Q6TDU7 716 aa15.87■□□□□ 0.13
SMCR8-201ENST00000406438 CHIC2Q9UKJ5 165 aa15.87■□□□□ 0.13
SMCR8-201ENST00000406438 MTUS2Q5JR59 1369 aa15.84■□□□□ 0.13
SMCR8-201ENST00000406438 PLEKHG5O94827 1062 aa15.83■□□□□ 0.13
SMCR8-201ENST00000406438 HAP1P54257 671 aaPredicted RBP15.83■□□□□ 0.12
SMCR8-201ENST00000406438 PPP1R15AO75807 674 aaPredicted RBP15.83■□□□□ 0.12
SMCR8-201ENST00000406438 CCDC180Q9P1Z9 1646 aa15.82■□□□□ 0.12
SMCR8-201ENST00000406438 TULP1O00294 542 aaPredicted RBP15.81■□□□□ 0.12
SMCR8-201ENST00000406438 TNNT2P45379 298 aaPredicted RBP15.81■□□□□ 0.12
SMCR8-201ENST00000406438 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
SMCR8-201ENST00000406438 CHMP7Q8WUX9 453 aaPredicted RBP15.76■□□□□ 0.11
SMCR8-201ENST00000406438 PTMAP06454 111 aaKnown RBP15.75■□□□□ 0.11
SMCR8-201ENST00000406438 FTSJ3Q8IY81 847 aaKnown RBP15.75■□□□□ 0.11
SMCR8-201ENST00000406438 EIF4G2P78344 907 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMCR8-201ENST00000406438 NPHP1O15259 732 aa15.74■□□□□ 0.11
SMCR8-201ENST00000406438 DNTTIP2Q5QJE6 756 aaKnown RBP15.74■□□□□ 0.11
SMCR8-201ENST00000406438 CFAP53Q96M91 514 aa15.74■□□□□ 0.11
SMCR8-201ENST00000406438 IRX6P78412 446 aaPredicted RBP15.71■□□□□ 0.11
SMCR8-201ENST00000406438 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.1
SMCR8-201ENST00000406438 CDCA8Q53HL2 280 aa15.7■□□□□ 0.1
SMCR8-201ENST00000406438 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
SMCR8-201ENST00000406438 KNSTRNQ9Y448 316 aa15.67■□□□□ 0.1
SMCR8-201ENST00000406438 ARID4BQ4LE39 1312 aaPredicted RBP15.67■□□□□ 0.1
SMCR8-201ENST00000406438 GOLGA6L6A8MZA4 724 aa15.67■□□□□ 0.1
SMCR8-201ENST00000406438 PPM1GO15355 546 aaPredicted RBP15.67■□□□□ 0.1
SMCR8-201ENST00000406438 TPRNQ4KMQ1 711 aa15.64■□□□□ 0.09
SMCR8-201ENST00000406438 GOLGA2Q08379 1002 aa15.62■□□□□ 0.09
SMCR8-201ENST00000406438 RRP7BPQ9NSQ0 103 aa15.61■□□□□ 0.09
SMCR8-201ENST00000406438 KCNH8Q96L42 1107 aa15.61■□□□□ 0.09
SMCR8-201ENST00000406438 LAS1LQ9Y4W2 734 aaKnown RBP15.61■□□□□ 0.09
SMCR8-201ENST00000406438 HIRIP3Q9BW71 556 aaPredicted RBP15.61■□□□□ 0.09
SMCR8-201ENST00000406438 CHMP4BQ9H444 224 aaKnown RBP15.6■□□□□ 0.09
SMCR8-201ENST00000406438 FGD1P98174 961 aa15.6■□□□□ 0.09
SMCR8-201ENST00000406438 MAPK8IP3Q9UPT6 1336 aa15.6■□□□□ 0.09
SMCR8-201ENST00000406438 CLIP1P30622 1438 aa15.59■□□□□ 0.09
SMCR8-201ENST00000406438 NRDCO43847 1150 aa15.59■□□□□ 0.09
SMCR8-201ENST00000406438 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.08
SMCR8-201ENST00000406438 RGL3Q3MIN7 710 aa15.58■□□□□ 0.08
SMCR8-201ENST00000406438 OS9Q13438 667 aaPredicted RBP15.57■□□□□ 0.08
SMCR8-201ENST00000406438 PNNQ9H307 717 aaKnown RBP15.57■□□□□ 0.08
SMCR8-201ENST00000406438 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
SMCR8-201ENST00000406438 TAOK2Q9UL54 1235 aa15.57■□□□□ 0.08
SMCR8-201ENST00000406438 PLEKHD1A6NEE1 506 aa15.57■□□□□ 0.08
SMCR8-201ENST00000406438 KCNJ4P48050 445 aa15.56■□□□□ 0.08
SMCR8-201ENST00000406438 NUDCQ9Y266 331 aa15.56■□□□□ 0.08
SMCR8-201ENST00000406438 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
SMCR8-201ENST00000406438 ERICH6BQ5W0A0 696 aa15.54■□□□□ 0.08
SMCR8-201ENST00000406438 NCBP3Q53F19 620 aaKnown RBP15.54■□□□□ 0.08
SMCR8-201ENST00000406438 MIER1Q8N108 512 aa15.54■□□□□ 0.08
SMCR8-201ENST00000406438 PLCB2Q00722 1185 aa15.54■□□□□ 0.08
SMCR8-201ENST00000406438 LMOD2Q6P5Q4 547 aa15.53■□□□□ 0.08
SMCR8-201ENST00000406438 NAP1L2Q9ULW6 460 aaPredicted RBP15.53■□□□□ 0.08
SMCR8-201ENST00000406438 CLSTN1O94985 981 aa15.52■□□□□ 0.08
SMCR8-201ENST00000406438 MS4A1P11836 297 aa15.52■□□□□ 0.08
SMCR8-201ENST00000406438 POGKQ9P215 609 aa15.52■□□□□ 0.07
SMCR8-201ENST00000406438 GOLGA3Q08378 1498 aa15.5■□□□□ 0.07
SMCR8-201ENST00000406438 CHAF1AQ13111 956 aaPredicted RBP15.5■□□□□ 0.07
SMCR8-201ENST00000406438 NAP1L5Q96NT1 182 aaPredicted RBP15.5■□□□□ 0.07
SMCR8-201ENST00000406438 CARD11Q9BXL7 1154 aa15.49■□□□□ 0.07
SMCR8-201ENST00000406438 NEUROD2Q15784 382 aa15.48■□□□□ 0.07
SMCR8-201ENST00000406438 GOLGA6L4A6NEF3 574 aa15.47■□□□□ 0.07
SMCR8-201ENST00000406438 CFDP1Q9UEE9 299 aaPredicted RBP15.46■□□□□ 0.07
SMCR8-201ENST00000406438 FRAT1Q92837 279 aaPredicted RBP15.45■□□□□ 0.06
SMCR8-201ENST00000406438 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
SMCR8-201ENST00000406438 L1TD1Q5T7N2 865 aaKnown RBP15.45■□□□□ 0.06
SMCR8-201ENST00000406438 MCCP23508 829 aa15.44■□□□□ 0.06
SMCR8-201ENST00000406438 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
SMCR8-201ENST00000406438 RGS3P49796 1198 aa15.42■□□□□ 0.06
SMCR8-201ENST00000406438 EEA1Q15075 1411 aa15.42■□□□□ 0.06
SMCR8-201ENST00000406438 HSCBQ8IWL3 235 aa15.41■□□□□ 0.06
SMCR8-201ENST00000406438 U2SURPO15042 1029 aaKnown RBP15.41■□□□□ 0.06
SMCR8-201ENST00000406438 CFAP44Q96MT7 982 aa15.41■□□□□ 0.06
SMCR8-201ENST00000406438 DRC7Q8IY82 874 aa15.41■□□□□ 0.06
SMCR8-201ENST00000406438 KANK1Q14678 1352 aa15.4■□□□□ 0.06
SMCR8-201ENST00000406438 KIAA2012Q0VF49 1180 aa15.4■□□□□ 0.06
SMCR8-201ENST00000406438 ISY1Q9ULR0 285 aaKnown RBP15.4■□□□□ 0.06
SMCR8-201ENST00000406438 GNL2Q13823 731 aaKnown RBP15.4■□□□□ 0.06
SMCR8-201ENST00000406438 MSNP26038 577 aaKnown RBP15.39■□□□□ 0.05
SMCR8-201ENST00000406438 SENP3-EIF4A1A0A087X0R7 540 aa15.38■□□□□ 0.05
SMCR8-201ENST00000406438 CC2D1BQ5T0F9 858 aaKnown RBP15.38■□□□□ 0.05
SMCR8-201ENST00000406438 HDGFP51858 240 aaKnown RBP15.37■□□□□ 0.05
SMCR8-201ENST00000406438 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
SMCR8-201ENST00000406438 BAZ1BQ9UIG0 1483 aaKnown RBP15.36■□□□□ 0.05
SMCR8-201ENST00000406438 NOP58Q9Y2X3 529 aaKnown RBP15.36■□□□□ 0.05
SMCR8-201ENST00000406438 PPP4R2Q9NY27 417 aa15.35■□□□□ 0.05
SMCR8-201ENST00000406438 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
SMCR8-201ENST00000406438 RTF1Q92541 710 aaKnown RBP15.33■□□□□ 0.05
SMCR8-201ENST00000406438 EIF4G1Q04637 1599 aaKnown RBP15.33■□□□□ 0.04
SMCR8-201ENST00000406438 KAT6BQ8WYB5 2073 aa15.33■□□□□ 0.04
SMCR8-201ENST00000406438 TMF1P82094 1093 aa15.33■□□□□ 0.04
SMCR8-201ENST00000406438 KIAA1211Q6ZU35 1233 aa15.32■□□□□ 0.04
SMCR8-201ENST00000406438 NOC3LQ8WTT2 800 aaKnown RBP15.32■□□□□ 0.04
SMCR8-201ENST00000406438 CEP164Q9UPV0 1460 aa15.31■□□□□ 0.04
SMCR8-201ENST00000406438 SRPK2P78362 688 aaKnown RBP15.3■□□□□ 0.04
SMCR8-201ENST00000406438 TMX4Q9H1E5 349 aaPredicted RBP15.3■□□□□ 0.04
SMCR8-201ENST00000406438 PRM3Q9NNZ6 103 aa15.28■□□□□ 0.04
SMCR8-201ENST00000406438 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
SMCR8-201ENST00000406438 PTMSP20962 102 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms