RNA–Protein interactions for RNA: ENST00000406122.5

ATL2-204, Transcript of atlastin GTPase 2, humanhuman

TSL 5 BASIC

Gene ATL2, Length 2,864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-204ENST00000406122 NAP1L2Q9ULW6 460 aaPredicted RBP16.79■□□□□ 0.28
ATL2-204ENST00000406122 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.28
ATL2-204ENST00000406122 DCAF1Q9Y4B6 1507 aa16.74■□□□□ 0.27
ATL2-204ENST00000406122 CCDC9Q9Y3X0 531 aaKnown RBP16.73■□□□□ 0.27
ATL2-204ENST00000406122 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
ATL2-204ENST00000406122 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.26
ATL2-204ENST00000406122 ZFP91Q96JP5 570 aaPredicted RBP16.7■□□□□ 0.26
ATL2-204ENST00000406122 PCGF6Q9BYE7 350 aa16.68■□□□□ 0.26
ATL2-204ENST00000406122 UNC13AQ9UPW8 1703 aa16.66■□□□□ 0.26
ATL2-204ENST00000406122 CHMP4BQ9H444 224 aaKnown RBP16.63■□□□□ 0.25
ATL2-204ENST00000406122 HMGB1P09429 215 aaKnown RBP16.62■□□□□ 0.25
ATL2-204ENST00000406122 PRDM10Q9NQV6 1147 aa16.59■□□□□ 0.25
ATL2-204ENST00000406122 CNPY4Q8N129 248 aa16.58■□□□□ 0.25
ATL2-204ENST00000406122 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.57■□□□□ 0.24
ATL2-204ENST00000406122 IPO4Q8TEX9 1081 aaKnown RBP16.56■□□□□ 0.24
ATL2-204ENST00000406122 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
ATL2-204ENST00000406122 TICAM2Q86XR7 235 aa16.56■□□□□ 0.24
ATL2-204ENST00000406122 SECISBP2LQ93073 1101 aaKnown RBP16.56■□□□□ 0.24
ATL2-204ENST00000406122 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
ATL2-204ENST00000406122 PUS7Q96PZ0 661 aaKnown RBP16.54■□□□□ 0.24
ATL2-204ENST00000406122 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
ATL2-204ENST00000406122 ZNF592Q92610 1267 aa16.54■□□□□ 0.24
ATL2-204ENST00000406122 NCLP19338 710 aaKnown RBP16.53■□□□□ 0.24
ATL2-204ENST00000406122 TMED8Q6PL24 325 aaPredicted RBP16.53■□□□□ 0.24
ATL2-204ENST00000406122 CHRM1P11229 460 aaPredicted RBP16.52■□□□□ 0.23
ATL2-204ENST00000406122 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
ATL2-204ENST00000406122 IL27Q8NEV9 243 aa16.48■□□□□ 0.23
ATL2-204ENST00000406122 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
ATL2-204ENST00000406122 BBXQ8WY36 941 aaPredicted RBP16.48■□□□□ 0.23
ATL2-204ENST00000406122 FBLN2P98095 1184 aa16.42■□□□□ 0.22
ATL2-204ENST00000406122 KCNG1Q9UIX4 513 aa16.4■□□□□ 0.22
ATL2-204ENST00000406122 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
ATL2-204ENST00000406122 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
ATL2-204ENST00000406122 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
ATL2-204ENST00000406122 WWC1Q8IX03 1113 aa16.36■□□□□ 0.21
ATL2-204ENST00000406122 CLSTN1O94985 981 aa16.34■□□□□ 0.21
ATL2-204ENST00000406122 SCRIBQ14160 1630 aa16.32■□□□□ 0.2
ATL2-204ENST00000406122 FAM43BQ6ZT52 329 aaPredicted RBP16.24■□□□□ 0.19
ATL2-204ENST00000406122 PSMD1Q99460 953 aa16.24■□□□□ 0.19
ATL2-204ENST00000406122 MSH5O43196 834 aa16.24■□□□□ 0.19
ATL2-204ENST00000406122 CERS3Q8IU89 383 aa16.24■□□□□ 0.19
ATL2-204ENST00000406122 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
ATL2-204ENST00000406122 STAC3Q96MF2 364 aa16.23■□□□□ 0.19
ATL2-204ENST00000406122 FOXD1Q16676 465 aa16.23■□□□□ 0.19
ATL2-204ENST00000406122 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
ATL2-204ENST00000406122 PLCD4Q9BRC7 762 aa16.2■□□□□ 0.18
ATL2-204ENST00000406122 PRDM16Q9HAZ2 1276 aa16.2■□□□□ 0.18
ATL2-204ENST00000406122 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
ATL2-204ENST00000406122 CWC22Q9HCG8 908 aaKnown RBP16.19■□□□□ 0.18
ATL2-204ENST00000406122 GRIPAP1Q4V328 841 aa16.17■□□□□ 0.18
ATL2-204ENST00000406122 ZNF526Q8TF50 670 aaPredicted RBP16.16■□□□□ 0.18
ATL2-204ENST00000406122 EIF4G1Q04637 1599 aaKnown RBP16.15■□□□□ 0.18
ATL2-204ENST00000406122 NECTIN2Q92692 538 aa16.15■□□□□ 0.18
ATL2-204ENST00000406122 SUPT16HQ9Y5B9 1047 aaKnown RBP16.13■□□□□ 0.17
ATL2-204ENST00000406122 CC2D2AQ9P2K1 1620 aa16.13■□□□□ 0.17
ATL2-204ENST00000406122 CNGB1Q14028 1251 aaPredicted RBP16.12■□□□□ 0.17
ATL2-204ENST00000406122 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
ATL2-204ENST00000406122 ZNF428Q96B54 188 aa16.08■□□□□ 0.16
ATL2-204ENST00000406122 ARID3AQ99856 593 aa16.08■□□□□ 0.16
ATL2-204ENST00000406122 NPM1P06748 294 aaKnown RBP eCLIP16.07■□□□□ 0.16
ATL2-204ENST00000406122 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
ATL2-204ENST00000406122 PRDM4Q9UKN5 801 aa16.06■□□□□ 0.16
ATL2-204ENST00000406122 FAM193AP78312 1265 aa16.05■□□□□ 0.16
ATL2-204ENST00000406122 RTL5Q5HYW3 569 aaPredicted RBP16.04■□□□□ 0.16
ATL2-204ENST00000406122 ARID4BQ4LE39 1312 aaPredicted RBP16.03■□□□□ 0.16
ATL2-204ENST00000406122 PTMSP20962 102 aa16.02■□□□□ 0.15
ATL2-204ENST00000406122 PATL2C9JE40 543 aaKnown RBP16.01■□□□□ 0.15
ATL2-204ENST00000406122 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
ATL2-204ENST00000406122 PTMAP06454 111 aaKnown RBP16.01■□□□□ 0.15
ATL2-204ENST00000406122 MCCP23508 829 aa16■□□□□ 0.15
ATL2-204ENST00000406122 CC2D2BQ6DHV5 1058 aa15.99■□□□□ 0.15
ATL2-204ENST00000406122 RRP9O43818 475 aaKnown RBP15.98■□□□□ 0.15
ATL2-204ENST00000406122 PHF23Q9BUL5 403 aaPredicted RBP15.98■□□□□ 0.15
ATL2-204ENST00000406122 HSP90AA2PQ14568 343 aaPredicted RBP15.97■□□□□ 0.15
ATL2-204ENST00000406122 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
ATL2-204ENST00000406122 ZNF830Q96NB3 372 aaPredicted RBP15.94■□□□□ 0.14
ATL2-204ENST00000406122 OS9Q13438 667 aaPredicted RBP15.94■□□□□ 0.14
ATL2-204ENST00000406122 RGS22Q8NE09 1264 aa15.94■□□□□ 0.14
ATL2-204ENST00000406122 RGS3P49796 1198 aa15.93■□□□□ 0.14
ATL2-204ENST00000406122 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
ATL2-204ENST00000406122 FANCIQ9NVI1 1328 aa15.92■□□□□ 0.14
ATL2-204ENST00000406122 ANAPC15P60006 121 aa15.91■□□□□ 0.14
ATL2-204ENST00000406122 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
ATL2-204ENST00000406122 NEFMP07197 916 aa15.91■□□□□ 0.14
ATL2-204ENST00000406122 SETQ01105 290 aaPredicted RBP15.89■□□□□ 0.13
ATL2-204ENST00000406122 CALD1Q05682 793 aaKnown RBP15.89■□□□□ 0.13
ATL2-204ENST00000406122 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
ATL2-204ENST00000406122 C11orf95C9JLR9 678 aaPredicted RBP15.89■□□□□ 0.13
ATL2-204ENST00000406122 FAM177A1Q8N128 213 aaPredicted RBP15.86■□□□□ 0.13
ATL2-204ENST00000406122 CLGNO14967 610 aa15.85■□□□□ 0.13
ATL2-204ENST00000406122 DNAJC2Q99543 621 aaKnown RBP15.85■□□□□ 0.13
ATL2-204ENST00000406122 ZBTB22O15209 634 aa15.85■□□□□ 0.13
ATL2-204ENST00000406122 GPATCH11Q8N954 259 aa15.85■□□□□ 0.13
ATL2-204ENST00000406122 CCDC27Q2M243 656 aa15.83■□□□□ 0.13
ATL2-204ENST00000406122 SOX12O15370 315 aa15.82■□□□□ 0.12
ATL2-204ENST00000406122 USP35Q9P2H5 1018 aa15.79■□□□□ 0.12
ATL2-204ENST00000406122 ZNF622Q969S3 477 aaKnown RBP eCLIP15.78■□□□□ 0.121e-9■■□□□ 12
ATL2-204ENST00000406122 SLC52A1Q9NWF4 448 aa15.78■□□□□ 0.12
ATL2-204ENST00000406122 PPM1GO15355 546 aaPredicted RBP15.78■□□□□ 0.12
ATL2-204ENST00000406122 MAFGO15525 162 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms