RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
SNED1-205ENST00000405547 TSPY4P0CV99 314 aa17.69■□□□□ 0.42
SNED1-205ENST00000405547 TSPY10P0CW01 314 aa17.69■□□□□ 0.42
SNED1-205ENST00000405547 NACADO15069 1562 aa17.66■□□□□ 0.42
SNED1-205ENST00000405547 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
SNED1-205ENST00000405547 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
SNED1-205ENST00000405547 SUPT16HQ9Y5B9 1047 aaKnown RBP17.63■□□□□ 0.41
SNED1-205ENST00000405547 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
SNED1-205ENST00000405547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNED1-205ENST00000405547 ARXQ96QS3 562 aa17.59■□□□□ 0.41
SNED1-205ENST00000405547 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.41
SNED1-205ENST00000405547 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.4
SNED1-205ENST00000405547 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.4
SNED1-205ENST00000405547 PPM1GO15355 546 aaPredicted RBP17.57■□□□□ 0.4
SNED1-205ENST00000405547 RRP7BPQ9NSQ0 103 aa17.57■□□□□ 0.4
SNED1-205ENST00000405547 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
SNED1-205ENST00000405547 TRIM44Q96DX7 344 aaPredicted RBP17.56■□□□□ 0.4
SNED1-205ENST00000405547 ESF1Q9H501 851 aaKnown RBP17.55■□□□□ 0.4
SNED1-205ENST00000405547 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
SNED1-205ENST00000405547 GOLGA6L22H0YM25 854 aa17.52■□□□□ 0.39
SNED1-205ENST00000405547 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
SNED1-205ENST00000405547 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
SNED1-205ENST00000405547 ERICH6BQ5W0A0 696 aa17.49■□□□□ 0.39
SNED1-205ENST00000405547 NOP58Q9Y2X3 529 aaKnown RBP17.49■□□□□ 0.39
SNED1-205ENST00000405547 CCNB3Q8WWL7 1395 aa17.48■□□□□ 0.39
SNED1-205ENST00000405547 TIMELESSQ9UNS1 1208 aa17.48■□□□□ 0.39
SNED1-205ENST00000405547 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.39
SNED1-205ENST00000405547 NPM1P06748 294 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNED1-205ENST00000405547 KNSTRNQ9Y448 316 aa17.44■□□□□ 0.38
SNED1-205ENST00000405547 CCER2I3L3R5 266 aa17.43■□□□□ 0.38
SNED1-205ENST00000405547 NCLP19338 710 aaKnown RBP17.43■□□□□ 0.38
SNED1-205ENST00000405547 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
SNED1-205ENST00000405547 CARD11Q9BXL7 1154 aa17.39■□□□□ 0.37
SNED1-205ENST00000405547 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
SNED1-205ENST00000405547 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
SNED1-205ENST00000405547 FTSJ3Q8IY81 847 aaKnown RBP17.36■□□□□ 0.37
SNED1-205ENST00000405547 PLEKHD1A6NEE1 506 aa17.36■□□□□ 0.37
SNED1-205ENST00000405547 VPS8Q8N3P4 1428 aa17.35■□□□□ 0.37
SNED1-205ENST00000405547 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
SNED1-205ENST00000405547 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
SNED1-205ENST00000405547 CASC1Q6TDU7 716 aa17.34■□□□□ 0.37
SNED1-205ENST00000405547 CFDP1Q9UEE9 299 aaPredicted RBP17.34■□□□□ 0.37
SNED1-205ENST00000405547 RBM19Q9Y4C8 960 aaKnown RBP17.34■□□□□ 0.37
SNED1-205ENST00000405547 RGL3Q3MIN7 710 aa17.33■□□□□ 0.36
SNED1-205ENST00000405547 SETD5Q9C0A6 1442 aa17.32■□□□□ 0.36
SNED1-205ENST00000405547 LAS1LQ9Y4W2 734 aaKnown RBP17.32■□□□□ 0.36
SNED1-205ENST00000405547 MS4A1P11836 297 aa17.28■□□□□ 0.36
SNED1-205ENST00000405547 CHMP4BQ9H444 224 aaKnown RBP17.28■□□□□ 0.36
SNED1-205ENST00000405547 PTMAP06454 111 aaKnown RBP17.28■□□□□ 0.36
SNED1-205ENST00000405547 SOGA1O94964 1423 aa17.26■□□□□ 0.35
SNED1-205ENST00000405547 RGS3P49796 1198 aa17.26■□□□□ 0.35
SNED1-205ENST00000405547 ARHGAP35Q9NRY4 1499 aa17.26■□□□□ 0.35
SNED1-205ENST00000405547 DEKP35659 375 aaKnown RBP17.24■□□□□ 0.35
SNED1-205ENST00000405547 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
SNED1-205ENST00000405547 DNTTIP2Q5QJE6 756 aaKnown RBP17.24■□□□□ 0.35
SNED1-205ENST00000405547 NAP1L5Q96NT1 182 aaPredicted RBP17.24■□□□□ 0.35
SNED1-205ENST00000405547 SENP3-EIF4A1A0A087X0R7 540 aa17.22■□□□□ 0.35
SNED1-205ENST00000405547 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
SNED1-205ENST00000405547 NUDCQ9Y266 331 aa17.21■□□□□ 0.35
SNED1-205ENST00000405547 RTN4Q9NQC3 1192 aaKnown RBP17.21■□□□□ 0.34
SNED1-205ENST00000405547 MAPK8IP3Q9UPT6 1336 aa17.2■□□□□ 0.34
SNED1-205ENST00000405547 L1TD1Q5T7N2 865 aaKnown RBP17.2■□□□□ 0.34
SNED1-205ENST00000405547 ZRSR1Q15695 479 aaKnown RBP17.19■□□□□ 0.34
SNED1-205ENST00000405547 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
SNED1-205ENST00000405547 TMF1P82094 1093 aa17.18■□□□□ 0.34
SNED1-205ENST00000405547 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
SNED1-205ENST00000405547 FRAT1Q92837 279 aaPredicted RBP17.17■□□□□ 0.34
SNED1-205ENST00000405547 CARMIL1Q5VZK9 1371 aa17.17■□□□□ 0.34
SNED1-205ENST00000405547 WIZO95785 1651 aa17.16■□□□□ 0.34
SNED1-205ENST00000405547 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
SNED1-205ENST00000405547 NEUROD2Q15784 382 aa17.15■□□□□ 0.34
SNED1-205ENST00000405547 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
SNED1-205ENST00000405547 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
SNED1-205ENST00000405547 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
SNED1-205ENST00000405547 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
SNED1-205ENST00000405547 CUX2O14529 1486 aa17.14■□□□□ 0.33
SNED1-205ENST00000405547 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
SNED1-205ENST00000405547 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
SNED1-205ENST00000405547 CDK11BP21127 795 aaKnown RBP17.12■□□□□ 0.33
SNED1-205ENST00000405547 CFAP44Q96MT7 982 aa17.12■□□□□ 0.33
SNED1-205ENST00000405547 DCAF11Q8TEB1 546 aa17.12■□□□□ 0.33
SNED1-205ENST00000405547 TCERG1O14776 1098 aaKnown RBP17.12■□□□□ 0.33
SNED1-205ENST00000405547 HSPA5P11021 654 aaKnown RBP17.11■□□□□ 0.33
SNED1-205ENST00000405547 TSHZ2Q9NRE2 1034 aa17.11■□□□□ 0.33
SNED1-205ENST00000405547 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
SNED1-205ENST00000405547 SMARCA2P51531 1590 aa17.08■□□□□ 0.32
SNED1-205ENST00000405547 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.32
SNED1-205ENST00000405547 EIF4G1Q04637 1599 aaKnown RBP17.07■□□□□ 0.32
SNED1-205ENST00000405547 RALBP1Q15311 655 aa17.07■□□□□ 0.32
SNED1-205ENST00000405547 MSNP26038 577 aaKnown RBP17.07■□□□□ 0.32
SNED1-205ENST00000405547 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
SNED1-205ENST00000405547 FMN1Q68DA7 1419 aa17.06■□□□□ 0.32
SNED1-205ENST00000405547 PTMSP20962 102 aa17.06■□□□□ 0.32
SNED1-205ENST00000405547 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
SNED1-205ENST00000405547 GOLGA6L6A8MZA4 724 aa17.04■□□□□ 0.32
SNED1-205ENST00000405547 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
SNED1-205ENST00000405547 CHAF1AQ13111 956 aaPredicted RBP17.04■□□□□ 0.32
SNED1-205ENST00000405547 NRDCO43847 1150 aa17.03■□□□□ 0.32
SNED1-205ENST00000405547 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
SNED1-205ENST00000405547 ARID4BQ4LE39 1312 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms