RNA–Protein interactions for RNA: ENST00000403915.5

KCNS3-202, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-202ENST00000403915 ZCCHC6Q5VYS8 1495 aaKnown RBP13.01□□□□□ -0.33
KCNS3-202ENST00000403915 THOC2Q8NI27 1593 aaKnown RBP12.99□□□□□ -0.33
KCNS3-202ENST00000403915 DCAF8L2P0C7V8 631 aa12.98□□□□□ -0.33
KCNS3-202ENST00000403915 NBR1Q14596 966 aa12.97□□□□□ -0.33
KCNS3-202ENST00000403915 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
KCNS3-202ENST00000403915 CCER1Q8TC90 406 aaPredicted RBP12.94□□□□□ -0.34
KCNS3-202ENST00000403915 BCANQ96GW7 911 aa12.94□□□□□ -0.34
KCNS3-202ENST00000403915 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
KCNS3-202ENST00000403915 ZNF316A6NFI3 1004 aaPredicted RBP12.92□□□□□ -0.34
KCNS3-202ENST00000403915 CHIC1Q5VXU3 224 aa12.92□□□□□ -0.34
KCNS3-202ENST00000403915 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
KCNS3-202ENST00000403915 C11orf95C9JLR9 678 aaPredicted RBP12.9□□□□□ -0.34
KCNS3-202ENST00000403915 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
KCNS3-202ENST00000403915 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
KCNS3-202ENST00000403915 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
KCNS3-202ENST00000403915 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
KCNS3-202ENST00000403915 NCAPD3P42695 1498 aa12.87□□□□□ -0.35
KCNS3-202ENST00000403915 IRX6P78412 446 aaPredicted RBP12.87□□□□□ -0.35
KCNS3-202ENST00000403915 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
KCNS3-202ENST00000403915 IPO4Q8TEX9 1081 aaKnown RBP12.85□□□□□ -0.35
KCNS3-202ENST00000403915 HSP90AA2PQ14568 343 aaPredicted RBP12.83□□□□□ -0.36
KCNS3-202ENST00000403915 ZFP91Q96JP5 570 aaPredicted RBP12.83□□□□□ -0.36
KCNS3-202ENST00000403915 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
KCNS3-202ENST00000403915 SCRIBQ14160 1630 aa12.81□□□□□ -0.36
KCNS3-202ENST00000403915 RRP9O43818 475 aaKnown RBP12.81□□□□□ -0.36
KCNS3-202ENST00000403915 GTF2E1P29083 439 aaPredicted RBP12.8□□□□□ -0.36
KCNS3-202ENST00000403915 BCCIPQ9P287 314 aaKnown RBP eCLIP12.8□□□□□ -0.36
KCNS3-202ENST00000403915 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
KCNS3-202ENST00000403915 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
KCNS3-202ENST00000403915 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
KCNS3-202ENST00000403915 FKBP8Q14318 412 aa12.79□□□□□ -0.36
KCNS3-202ENST00000403915 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
KCNS3-202ENST00000403915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
KCNS3-202ENST00000403915 LAMC3Q9Y6N6 1575 aa12.78□□□□□ -0.36
KCNS3-202ENST00000403915 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.36
KCNS3-202ENST00000403915 CDK11BP21127 795 aaKnown RBP12.77□□□□□ -0.37
KCNS3-202ENST00000403915 BRPF3Q9ULD4 1205 aa12.77□□□□□ -0.37
KCNS3-202ENST00000403915 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
KCNS3-202ENST00000403915 FBXO3Q9UK99 471 aa12.76□□□□□ -0.37
KCNS3-202ENST00000403915 PRDM4Q9UKN5 801 aa12.75□□□□□ -0.37
KCNS3-202ENST00000403915 HSP90B1P14625 803 aaKnown RBP12.74□□□□□ -0.37
KCNS3-202ENST00000403915 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
KCNS3-202ENST00000403915 ITGAEP38570 1179 aa12.73□□□□□ -0.37
KCNS3-202ENST00000403915 TPRNQ4KMQ1 711 aa12.73□□□□□ -0.37
KCNS3-202ENST00000403915 WASHC2CQ9Y4E1 1318 aa12.73□□□□□ -0.37
KCNS3-202ENST00000403915 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
KCNS3-202ENST00000403915 SECISBP2LQ93073 1101 aaKnown RBP12.72□□□□□ -0.37
KCNS3-202ENST00000403915 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
KCNS3-202ENST00000403915 TEX2Q8IWB9 1127 aa12.71□□□□□ -0.37
KCNS3-202ENST00000403915 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.37
KCNS3-202ENST00000403915 FTSJ3Q8IY81 847 aaKnown RBP12.7□□□□□ -0.38
KCNS3-202ENST00000403915 RGS3P49796 1198 aa12.69□□□□□ -0.38
KCNS3-202ENST00000403915 WASHC2AQ641Q2 1341 aa12.69□□□□□ -0.38
KCNS3-202ENST00000403915 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
KCNS3-202ENST00000403915 FAM43AQ8N2R8 423 aa12.68□□□□□ -0.38
KCNS3-202ENST00000403915 CHRM1P11229 460 aaPredicted RBP12.67□□□□□ -0.38
KCNS3-202ENST00000403915 CALD1Q05682 793 aaKnown RBP12.67□□□□□ -0.38
KCNS3-202ENST00000403915 CNGB1Q14028 1251 aaPredicted RBP12.67□□□□□ -0.38
KCNS3-202ENST00000403915 ARHGEF11O15085 1522 aa12.65□□□□□ -0.38
KCNS3-202ENST00000403915 WDR62O43379 1518 aa12.65□□□□□ -0.38
KCNS3-202ENST00000403915 FOXD1Q16676 465 aa12.65□□□□□ -0.38
KCNS3-202ENST00000403915 HSP90AA1P07900 732 aaKnown RBP12.64□□□□□ -0.39
KCNS3-202ENST00000403915 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
KCNS3-202ENST00000403915 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
KCNS3-202ENST00000403915 MRC2Q9UBG0 1479 aa12.61□□□□□ -0.39
KCNS3-202ENST00000403915 NEFMP07197 916 aa12.61□□□□□ -0.39
KCNS3-202ENST00000403915 CNPY4Q8N129 248 aa12.61□□□□□ -0.39
KCNS3-202ENST00000403915 SMARCA2P51531 1590 aa12.59□□□□□ -0.39
KCNS3-202ENST00000403915 POLR3GLQ9BT43 218 aa12.57□□□□□ -0.4
KCNS3-202ENST00000403915 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
KCNS3-202ENST00000403915 NESP48681 1621 aa12.57□□□□□ -0.4
KCNS3-202ENST00000403915 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
KCNS3-202ENST00000403915 NCLP19338 710 aaKnown RBP12.55□□□□□ -0.4
KCNS3-202ENST00000403915 KCNA4P22459 653 aa12.55□□□□□ -0.4
KCNS3-202ENST00000403915 USP35Q9P2H5 1018 aa12.54□□□□□ -0.4
KCNS3-202ENST00000403915 KCNG1Q9UIX4 513 aa12.54□□□□□ -0.4
KCNS3-202ENST00000403915 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.4
KCNS3-202ENST00000403915 KIF21AQ7Z4S6 1674 aa12.52□□□□□ -0.41
KCNS3-202ENST00000403915 PRDM10Q9NQV6 1147 aa12.52□□□□□ -0.41
KCNS3-202ENST00000403915 CENPJQ9HC77 1338 aaPredicted RBP12.52□□□□□ -0.41
KCNS3-202ENST00000403915 ZNF830Q96NB3 372 aaPredicted RBP12.51□□□□□ -0.41
KCNS3-202ENST00000403915 ATAD2BQ9ULI0 1458 aa12.51□□□□□ -0.41
KCNS3-202ENST00000403915 WWC1Q8IX03 1113 aa12.5□□□□□ -0.41
KCNS3-202ENST00000403915 RSF1Q96T23 1441 aaPredicted RBP12.49□□□□□ -0.41
KCNS3-202ENST00000403915 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
KCNS3-202ENST00000403915 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
KCNS3-202ENST00000403915 GSE1Q14687 1217 aa12.45□□□□□ -0.42
KCNS3-202ENST00000403915 CCDC9Q9Y3X0 531 aaKnown RBP12.45□□□□□ -0.42
KCNS3-202ENST00000403915 IGSF3O75054 1194 aa12.44□□□□□ -0.42
KCNS3-202ENST00000403915 IPO9Q96P70 1041 aaKnown RBP12.44□□□□□ -0.42
KCNS3-202ENST00000403915 ERCC6L2Q5T890 1561 aa12.44□□□□□ -0.42
KCNS3-202ENST00000403915 PDCL3Q9H2J4 239 aa12.43□□□□□ -0.42
KCNS3-202ENST00000403915 TMEM51Q9NW97 253 aa12.43□□□□□ -0.42
KCNS3-202ENST00000403915 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
KCNS3-202ENST00000403915 ARAP1Q96P48 1450 aa12.42□□□□□ -0.42
KCNS3-202ENST00000403915 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
KCNS3-202ENST00000403915 RGS22Q8NE09 1264 aa12.4□□□□□ -0.42
KCNS3-202ENST00000403915 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.4□□□□□ -0.42
KCNS3-202ENST00000403915 TICAM2Q86XR7 235 aa12.4□□□□□ -0.43
KCNS3-202ENST00000403915 PPP6R1Q9UPN7 881 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms