RNA–Protein interactions for RNA: ENST00000401783.6

SVEP1-203, Transcript of sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SVEP1, Length 12,350 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVEP1-203ENST00000401783 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
SVEP1-203ENST00000401783 TIMELESSQ9UNS1 1208 aa12.11□□□□□ -0.47
SVEP1-203ENST00000401783 ERICH6BQ5W0A0 696 aa12.1□□□□□ -0.47
SVEP1-203ENST00000401783 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
SVEP1-203ENST00000401783 SMARCA2P51531 1590 aa12.09□□□□□ -0.47
SVEP1-203ENST00000401783 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
SVEP1-203ENST00000401783 KAT6BQ8WYB5 2073 aa12.09□□□□□ -0.47
SVEP1-203ENST00000401783 EIF4G2P78344 907 aaKnown RBP eCLIP12.07□□□□□ -0.48
SVEP1-203ENST00000401783 ZRSR1Q15695 479 aaKnown RBP12.07□□□□□ -0.48
SVEP1-203ENST00000401783 MRS2Q9HD23 443 aa12.07□□□□□ -0.48
SVEP1-203ENST00000401783 MYH16Q9H6N6 1097 aa12.06□□□□□ -0.48
SVEP1-203ENST00000401783 WDR43Q15061 677 aaKnown RBP eCLIP12.05□□□□□ -0.48
SVEP1-203ENST00000401783 CDCA8Q53HL2 280 aa12.05□□□□□ -0.48
SVEP1-203ENST00000401783 DDX10Q13206 875 aaKnown RBP12.04□□□□□ -0.48
SVEP1-203ENST00000401783 PPM1GO15355 546 aaPredicted RBP12.02□□□□□ -0.48
SVEP1-203ENST00000401783 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.48
SVEP1-203ENST00000401783 TOP2AP11388 1531 aaKnown RBP12.02□□□□□ -0.48
SVEP1-203ENST00000401783 ARID4BQ4LE39 1312 aaPredicted RBP12.02□□□□□ -0.48
SVEP1-203ENST00000401783 VPS8Q8N3P4 1428 aa12.02□□□□□ -0.49
SVEP1-203ENST00000401783 MIER1Q8N108 512 aa12.01□□□□□ -0.49
SVEP1-203ENST00000401783 FAM9BQ8IZU0 186 aa12□□□□□ -0.49
SVEP1-203ENST00000401783 CHAF1AQ13111 956 aaPredicted RBP11.99□□□□□ -0.49
SVEP1-203ENST00000401783 CHMP4BQ9H444 224 aaKnown RBP11.99□□□□□ -0.49
SVEP1-203ENST00000401783 GOLGA6L6A8MZA4 724 aa11.99□□□□□ -0.49
SVEP1-203ENST00000401783 CCNB3Q8WWL7 1395 aa11.98□□□□□ -0.49
SVEP1-203ENST00000401783 ARHGAP35Q9NRY4 1499 aa11.98□□□□□ -0.49
SVEP1-203ENST00000401783 SALL2Q9Y467 1007 aaPredicted RBP11.96□□□□□ -0.49
SVEP1-203ENST00000401783 TSPY4P0CV99 314 aa11.96□□□□□ -0.49
SVEP1-203ENST00000401783 TSPY10P0CW01 314 aa11.96□□□□□ -0.49
SVEP1-203ENST00000401783 CCER2I3L3R5 266 aa11.95□□□□□ -0.5
SVEP1-203ENST00000401783 ZNF777Q9ULD5 760 aaPredicted RBP11.95□□□□□ -0.5
SVEP1-203ENST00000401783 TULP1O00294 542 aaPredicted RBP11.95□□□□□ -0.5
SVEP1-203ENST00000401783 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
SVEP1-203ENST00000401783 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
SVEP1-203ENST00000401783 FBLN2P98095 1184 aa11.93□□□□□ -0.5
SVEP1-203ENST00000401783 PPP4R2Q9NY27 417 aa11.93□□□□□ -0.5
SVEP1-203ENST00000401783 NRDCO43847 1150 aa11.93□□□□□ -0.5
SVEP1-203ENST00000401783 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
SVEP1-203ENST00000401783 MS4A1P11836 297 aa11.92□□□□□ -0.5
SVEP1-203ENST00000401783 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
SVEP1-203ENST00000401783 FMN1Q68DA7 1419 aa11.9□□□□□ -0.5
SVEP1-203ENST00000401783 IRX6P78412 446 aaPredicted RBP11.9□□□□□ -0.51
SVEP1-203ENST00000401783 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
SVEP1-203ENST00000401783 NOP58Q9Y2X3 529 aaKnown RBP11.89□□□□□ -0.51
SVEP1-203ENST00000401783 ESF1Q9H501 851 aaKnown RBP11.89□□□□□ -0.51
SVEP1-203ENST00000401783 SETD5Q9C0A6 1442 aa11.88□□□□□ -0.51
SVEP1-203ENST00000401783 WIZO95785 1651 aa11.88□□□□□ -0.51
SVEP1-203ENST00000401783 MSNP26038 577 aaKnown RBP11.88□□□□□ -0.51
SVEP1-203ENST00000401783 PTMSP20962 102 aa11.88□□□□□ -0.51
SVEP1-203ENST00000401783 TNNT3P45378 269 aaPredicted RBP11.87□□□□□ -0.51
SVEP1-203ENST00000401783 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
SVEP1-203ENST00000401783 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
SVEP1-203ENST00000401783 PLCB2Q00722 1185 aa11.86□□□□□ -0.51
SVEP1-203ENST00000401783 KNSTRNQ9Y448 316 aa11.85□□□□□ -0.51
SVEP1-203ENST00000401783 LAS1LQ9Y4W2 734 aaKnown RBP11.85□□□□□ -0.51
SVEP1-203ENST00000401783 L1TD1Q5T7N2 865 aaKnown RBP11.83□□□□□ -0.52
SVEP1-203ENST00000401783 SUPT16HQ9Y5B9 1047 aaKnown RBP11.83□□□□□ -0.52
SVEP1-203ENST00000401783 ROCK2O75116 1388 aaKnown RBP11.83□□□□□ -0.52
SVEP1-203ENST00000401783 A0A0G2JS52 829 aa11.82□□□□□ -0.52
SVEP1-203ENST00000401783 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
SVEP1-203ENST00000401783 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
SVEP1-203ENST00000401783 PNNQ9H307 717 aaKnown RBP11.81□□□□□ -0.52
SVEP1-203ENST00000401783 FTSJ3Q8IY81 847 aaKnown RBP11.8□□□□□ -0.52
SVEP1-203ENST00000401783 NOC3LQ8WTT2 800 aaKnown RBP11.8□□□□□ -0.52
SVEP1-203ENST00000401783 CUX1P39880 1505 aa11.8□□□□□ -0.52
SVEP1-203ENST00000401783 KIF21BO75037 1637 aa11.79□□□□□ -0.52
SVEP1-203ENST00000401783 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
SVEP1-203ENST00000401783 DRC7Q8IY82 874 aa11.79□□□□□ -0.52
SVEP1-203ENST00000401783 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
SVEP1-203ENST00000401783 CALRP27797 417 aaKnown RBP11.78□□□□□ -0.52
SVEP1-203ENST00000401783 HAP1P54257 671 aaPredicted RBP11.78□□□□□ -0.52
SVEP1-203ENST00000401783 CHGAP10645 457 aaKnown RBP11.78□□□□□ -0.52
SVEP1-203ENST00000401783 NCBP3Q53F19 620 aaKnown RBP11.78□□□□□ -0.52
SVEP1-203ENST00000401783 PLPPR3Q6T4P5 718 aa11.78□□□□□ -0.52
SVEP1-203ENST00000401783 NPM1P06748 294 aaKnown RBP eCLIP11.78□□□□□ -0.52
SVEP1-203ENST00000401783 CCDC88BA6NC98 1476 aa11.77□□□□□ -0.53
SVEP1-203ENST00000401783 MROH2BQ7Z745 1585 aa11.77□□□□□ -0.53
SVEP1-203ENST00000401783 CHIC2Q9UKJ5 165 aa11.77□□□□□ -0.53
SVEP1-203ENST00000401783 ARID3AQ99856 593 aa11.76□□□□□ -0.53
SVEP1-203ENST00000401783 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
SVEP1-203ENST00000401783 KANK1Q14678 1352 aa11.75□□□□□ -0.53
SVEP1-203ENST00000401783 DEKP35659 375 aaKnown RBP11.75□□□□□ -0.53
SVEP1-203ENST00000401783 CCDC18Q5T9S5 1454 aa11.75□□□□□ -0.53
SVEP1-203ENST00000401783 PLEKHD1A6NEE1 506 aa11.75□□□□□ -0.53
SVEP1-203ENST00000401783 KIAA2012Q0VF49 1180 aa11.75□□□□□ -0.53
SVEP1-203ENST00000401783 CHMP7Q8WUX9 453 aaPredicted RBP11.74□□□□□ -0.53
SVEP1-203ENST00000401783 KTN1Q86UP2 1357 aaKnown RBP11.74□□□□□ -0.53
SVEP1-203ENST00000401783 ARID3CA6NKF2 412 aa11.74□□□□□ -0.53
SVEP1-203ENST00000401783 CFDP1Q9UEE9 299 aaPredicted RBP11.74□□□□□ -0.53
SVEP1-203ENST00000401783 CARD11Q9BXL7 1154 aa11.73□□□□□ -0.53
SVEP1-203ENST00000401783 USP35Q9P2H5 1018 aa11.73□□□□□ -0.53
SVEP1-203ENST00000401783 CUX2O14529 1486 aa11.73□□□□□ -0.53
SVEP1-203ENST00000401783 GOLGA6L1Q8N7Z2 621 aa11.72□□□□□ -0.53
SVEP1-203ENST00000401783 RALBP1Q15311 655 aa11.72□□□□□ -0.53
SVEP1-203ENST00000401783 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
SVEP1-203ENST00000401783 TAOK2Q9UL54 1235 aa11.72□□□□□ -0.53
SVEP1-203ENST00000401783 GOLGA6L4A6NEF3 574 aa11.71□□□□□ -0.53
SVEP1-203ENST00000401783 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.53
SVEP1-203ENST00000401783 FGD1P98174 961 aa11.71□□□□□ -0.53
SVEP1-203ENST00000401783 CARMIL1Q5VZK9 1371 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms