RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 C14orf37Q86TY3 774 aa16.23■□□□□ 0.19
CACNA1C-219ENST00000399649 CASC1Q6TDU7 716 aa16.21■□□□□ 0.19
CACNA1C-219ENST00000399649 KDM2AQ9Y2K7 1162 aa16.21■□□□□ 0.19
CACNA1C-219ENST00000399649 PLEKHG5O94827 1062 aa16.18■□□□□ 0.18
CACNA1C-219ENST00000399649 DNTTIP2Q5QJE6 756 aaKnown RBP16.18■□□□□ 0.18
CACNA1C-219ENST00000399649 CHIC2Q9UKJ5 165 aa16.18■□□□□ 0.18
CACNA1C-219ENST00000399649 IRX6P78412 446 aaPredicted RBP16.15■□□□□ 0.18
CACNA1C-219ENST00000399649 TPRNQ4KMQ1 711 aa16.13■□□□□ 0.17
CACNA1C-219ENST00000399649 HAP1P54257 671 aaPredicted RBP16.12■□□□□ 0.17
CACNA1C-219ENST00000399649 PPP1R15AO75807 674 aaPredicted RBP16.12■□□□□ 0.17
CACNA1C-219ENST00000399649 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
CACNA1C-219ENST00000399649 TSPY4P0CV99 314 aa16.11■□□□□ 0.17
CACNA1C-219ENST00000399649 TSPY10P0CW01 314 aa16.11■□□□□ 0.17
CACNA1C-219ENST00000399649 GOLGA6L6A8MZA4 724 aa16.11■□□□□ 0.17
CACNA1C-219ENST00000399649 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
CACNA1C-219ENST00000399649 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
CACNA1C-219ENST00000399649 FTSJ3Q8IY81 847 aaKnown RBP16.05■□□□□ 0.16
CACNA1C-219ENST00000399649 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
CACNA1C-219ENST00000399649 NAP1L5Q96NT1 182 aaPredicted RBP16.02■□□□□ 0.16
CACNA1C-219ENST00000399649 EIF4G2P78344 907 aaKnown RBP eCLIP16.02■□□□□ 0.15
CACNA1C-219ENST00000399649 NPHP1O15259 732 aa16.01■□□□□ 0.15
CACNA1C-219ENST00000399649 TAOK2Q9UL54 1235 aa16■□□□□ 0.15
CACNA1C-219ENST00000399649 PLCB2Q00722 1185 aa16■□□□□ 0.15
CACNA1C-219ENST00000399649 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
CACNA1C-219ENST00000399649 ERICH6BQ5W0A0 696 aa15.98■□□□□ 0.15
CACNA1C-219ENST00000399649 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
CACNA1C-219ENST00000399649 LAS1LQ9Y4W2 734 aaKnown RBP15.97■□□□□ 0.15
CACNA1C-219ENST00000399649 NRDCO43847 1150 aa15.97■□□□□ 0.15
CACNA1C-219ENST00000399649 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
CACNA1C-219ENST00000399649 FGD1P98174 961 aa15.94■□□□□ 0.14
CACNA1C-219ENST00000399649 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
CACNA1C-219ENST00000399649 HIRIP3Q9BW71 556 aaPredicted RBP15.94■□□□□ 0.14
CACNA1C-219ENST00000399649 MAPK8IP3Q9UPT6 1336 aa15.94■□□□□ 0.14
CACNA1C-219ENST00000399649 OS9Q13438 667 aaPredicted RBP15.94■□□□□ 0.14
CACNA1C-219ENST00000399649 CLSTN1O94985 981 aa15.93■□□□□ 0.14
CACNA1C-219ENST00000399649 KNSTRNQ9Y448 316 aa15.93■□□□□ 0.14
CACNA1C-219ENST00000399649 NAP1L2Q9ULW6 460 aaPredicted RBP15.93■□□□□ 0.14
CACNA1C-219ENST00000399649 ARID4BQ4LE39 1312 aaPredicted RBP15.92■□□□□ 0.14
CACNA1C-219ENST00000399649 GOLGA2Q08379 1002 aa15.92■□□□□ 0.14
CACNA1C-219ENST00000399649 CHMP4BQ9H444 224 aaKnown RBP15.91■□□□□ 0.14
CACNA1C-219ENST00000399649 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
CACNA1C-219ENST00000399649 MIER1Q8N108 512 aa15.9■□□□□ 0.14
CACNA1C-219ENST00000399649 KCNJ4P48050 445 aa15.89■□□□□ 0.13
CACNA1C-219ENST00000399649 CHAF1AQ13111 956 aaPredicted RBP15.89■□□□□ 0.13
CACNA1C-219ENST00000399649 RRP7BPQ9NSQ0 103 aa15.88■□□□□ 0.13
CACNA1C-219ENST00000399649 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
CACNA1C-219ENST00000399649 NUDCQ9Y266 331 aa15.88■□□□□ 0.13
CACNA1C-219ENST00000399649 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
CACNA1C-219ENST00000399649 GOLGA6L4A6NEF3 574 aa15.86■□□□□ 0.13
CACNA1C-219ENST00000399649 L1TD1Q5T7N2 865 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-219ENST00000399649 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
CACNA1C-219ENST00000399649 NEUROD2Q15784 382 aa15.84■□□□□ 0.13
CACNA1C-219ENST00000399649 MS4A1P11836 297 aa15.84■□□□□ 0.13
CACNA1C-219ENST00000399649 LMOD2Q6P5Q4 547 aa15.84■□□□□ 0.13
CACNA1C-219ENST00000399649 PNNQ9H307 717 aaKnown RBP15.82■□□□□ 0.12
CACNA1C-219ENST00000399649 FRAT1Q92837 279 aaPredicted RBP15.82■□□□□ 0.12
CACNA1C-219ENST00000399649 DRC7Q8IY82 874 aa15.82■□□□□ 0.12
CACNA1C-219ENST00000399649 RGS3P49796 1198 aa15.82■□□□□ 0.12
CACNA1C-219ENST00000399649 RTN4Q9NQC3 1192 aaKnown RBP15.81■□□□□ 0.12
CACNA1C-219ENST00000399649 RSF1Q96T23 1441 aaPredicted RBP15.81■□□□□ 0.12
CACNA1C-219ENST00000399649 MSNP26038 577 aaKnown RBP15.8■□□□□ 0.12
CACNA1C-219ENST00000399649 HSCBQ8IWL3 235 aa15.8■□□□□ 0.12
CACNA1C-219ENST00000399649 SENP3-EIF4A1A0A087X0R7 540 aa15.8■□□□□ 0.12
CACNA1C-219ENST00000399649 MCCP23508 829 aa15.8■□□□□ 0.12
CACNA1C-219ENST00000399649 POGKQ9P215 609 aa15.79■□□□□ 0.12
CACNA1C-219ENST00000399649 SUPT16HQ9Y5B9 1047 aaKnown RBP15.79■□□□□ 0.12
CACNA1C-219ENST00000399649 KIAA2012Q0VF49 1180 aa15.79■□□□□ 0.12
CACNA1C-219ENST00000399649 NOP58Q9Y2X3 529 aaKnown RBP15.78■□□□□ 0.12
CACNA1C-219ENST00000399649 CARD11Q9BXL7 1154 aa15.78■□□□□ 0.12
CACNA1C-219ENST00000399649 ISY1Q9ULR0 285 aaKnown RBP15.77■□□□□ 0.11
CACNA1C-219ENST00000399649 PLEKHD1A6NEE1 506 aa15.76■□□□□ 0.11
CACNA1C-219ENST00000399649 GNL2Q13823 731 aaKnown RBP15.75■□□□□ 0.11
CACNA1C-219ENST00000399649 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
CACNA1C-219ENST00000399649 U2SURPO15042 1029 aaKnown RBP15.73■□□□□ 0.11
CACNA1C-219ENST00000399649 AMER1Q5JTC6 1135 aaPredicted RBP15.72■□□□□ 0.11
CACNA1C-219ENST00000399649 NOC3LQ8WTT2 800 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-219ENST00000399649 ERCC6Q03468 1493 aa15.72■□□□□ 0.11
CACNA1C-219ENST00000399649 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
CACNA1C-219ENST00000399649 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
CACNA1C-219ENST00000399649 CC2D1BQ5T0F9 858 aaKnown RBP15.7■□□□□ 0.1
CACNA1C-219ENST00000399649 CLIP1P30622 1438 aa15.7■□□□□ 0.1
CACNA1C-219ENST00000399649 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
CACNA1C-219ENST00000399649 PRM3Q9NNZ6 103 aa15.67■□□□□ 0.1
CACNA1C-219ENST00000399649 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
CACNA1C-219ENST00000399649 PTMSP20962 102 aa15.65■□□□□ 0.1
CACNA1C-219ENST00000399649 SPRYD3Q8NCJ5 442 aa15.65■□□□□ 0.1
CACNA1C-219ENST00000399649 CFDP1Q9UEE9 299 aaPredicted RBP15.64■□□□□ 0.09
CACNA1C-219ENST00000399649 KIAA1211Q6ZU35 1233 aa15.62■□□□□ 0.09
CACNA1C-219ENST00000399649 RTF1Q92541 710 aaKnown RBP15.62■□□□□ 0.09
CACNA1C-219ENST00000399649 TPM4P67936 248 aa15.61■□□□□ 0.09
CACNA1C-219ENST00000399649 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
CACNA1C-219ENST00000399649 TMF1P82094 1093 aa15.6■□□□□ 0.09
CACNA1C-219ENST00000399649 A0A0U1RQG5 324 aaPredicted RBP15.59■□□□□ 0.09
CACNA1C-219ENST00000399649 HDGFP51858 240 aaKnown RBP15.58■□□□□ 0.08
CACNA1C-219ENST00000399649 GBP4Q96PP9 640 aa15.57■□□□□ 0.08
CACNA1C-219ENST00000399649 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
CACNA1C-219ENST00000399649 SOX12O15370 315 aa15.57■□□□□ 0.08
CACNA1C-219ENST00000399649 TMX4Q9H1E5 349 aaPredicted RBP15.57■□□□□ 0.08
CACNA1C-219ENST00000399649 KANK1Q14678 1352 aa15.57■□□□□ 0.08
CACNA1C-219ENST00000399649 CCDC180Q9P1Z9 1646 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms