RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 PDE4CQ08493 712 aa14.95□□□□□ -0.02
CACNA1C-217ENST00000399641 PTMAP06454 111 aaKnown RBP14.93□□□□□ -0.02
CACNA1C-217ENST00000399641 TRIM44Q96DX7 344 aaPredicted RBP14.92□□□□□ -0.02
CACNA1C-217ENST00000399641 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
CACNA1C-217ENST00000399641 PLCB2Q00722 1185 aa14.89□□□□□ -0.03
CACNA1C-217ENST00000399641 ARID3AQ99856 593 aa14.89□□□□□ -0.03
CACNA1C-217ENST00000399641 NAP1L5Q96NT1 182 aaPredicted RBP14.88□□□□□ -0.03
CACNA1C-217ENST00000399641 ZRSR1Q15695 479 aaKnown RBP14.84□□□□□ -0.03
CACNA1C-217ENST00000399641 FKBP8Q14318 412 aa14.84□□□□□ -0.03
CACNA1C-217ENST00000399641 ERICH6BQ5W0A0 696 aa14.82□□□□□ -0.04
CACNA1C-217ENST00000399641 LOC105371045A0A1W2PR82 267 aa14.8□□□□□ -0.04
CACNA1C-217ENST00000399641 ERCC6Q03468 1493 aa14.78□□□□□ -0.04
CACNA1C-217ENST00000399641 TSPY4P0CV99 314 aa14.76□□□□□ -0.05
CACNA1C-217ENST00000399641 TSPY10P0CW01 314 aa14.76□□□□□ -0.05
CACNA1C-217ENST00000399641 IRX6P78412 446 aaPredicted RBP14.74□□□□□ -0.05
CACNA1C-217ENST00000399641 MLECQ14165 292 aa14.73□□□□□ -0.05
CACNA1C-217ENST00000399641 FAM9BQ8IZU0 186 aa14.73□□□□□ -0.05
CACNA1C-217ENST00000399641 CCDC9Q9Y3X0 531 aaKnown RBP14.72□□□□□ -0.05
CACNA1C-217ENST00000399641 NAP1L2Q9ULW6 460 aaPredicted RBP14.71□□□□□ -0.05
CACNA1C-217ENST00000399641 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
CACNA1C-217ENST00000399641 PHF23Q9BUL5 403 aaPredicted RBP14.69□□□□□ -0.06
CACNA1C-217ENST00000399641 ISY1Q9ULR0 285 aaKnown RBP14.69□□□□□ -0.06
CACNA1C-217ENST00000399641 SENP3-EIF4A1A0A087X0R7 540 aa14.68□□□□□ -0.06
CACNA1C-217ENST00000399641 NOC3LQ8WTT2 800 aaKnown RBP14.67□□□□□ -0.06
CACNA1C-217ENST00000399641 KRI1Q8N9T8 703 aaKnown RBP14.67□□□□□ -0.06
CACNA1C-217ENST00000399641 MYH16Q9H6N6 1097 aa14.66□□□□□ -0.06
CACNA1C-217ENST00000399641 PATL2C9JE40 543 aaKnown RBP14.65□□□□□ -0.06
CACNA1C-217ENST00000399641 KDM2AQ9Y2K7 1162 aa14.65□□□□□ -0.06
CACNA1C-217ENST00000399641 CHIC2Q9UKJ5 165 aa14.64□□□□□ -0.07
CACNA1C-217ENST00000399641 CCDC136Q96JN2 1154 aa14.61□□□□□ -0.07
CACNA1C-217ENST00000399641 TMX4Q9H1E5 349 aaPredicted RBP14.61□□□□□ -0.07
CACNA1C-217ENST00000399641 TMC1Q8TDI8 760 aa14.6□□□□□ -0.07
CACNA1C-217ENST00000399641 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.6□□□□□ -0.07
CACNA1C-217ENST00000399641 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.6□□□□□ -0.07
CACNA1C-217ENST00000399641 GOLGA2Q08379 1002 aa14.59□□□□□ -0.07
CACNA1C-217ENST00000399641 CALRP27797 417 aaKnown RBP14.58□□□□□ -0.08
CACNA1C-217ENST00000399641 A0A0U1RQG5 324 aaPredicted RBP14.58□□□□□ -0.08
CACNA1C-217ENST00000399641 PPM1GO15355 546 aaPredicted RBP14.58□□□□□ -0.08
CACNA1C-217ENST00000399641 HNRNPUQ00839 825 aaKnown RBP eCLIP14.57□□□□□ -0.08
CACNA1C-217ENST00000399641 PLEKHD1A6NEE1 506 aa14.57□□□□□ -0.08
CACNA1C-217ENST00000399641 TNNT3P45378 269 aaPredicted RBP14.56□□□□□ -0.08
CACNA1C-217ENST00000399641 WDR43Q15061 677 aaKnown RBP eCLIP14.56□□□□□ -0.08
CACNA1C-217ENST00000399641 GOLGA6L22H0YM25 854 aa14.56□□□□□ -0.08
CACNA1C-217ENST00000399641 GOLGA6L6A8MZA4 724 aa14.55□□□□□ -0.08
CACNA1C-217ENST00000399641 WWC1Q8IX03 1113 aa14.55□□□□□ -0.08
CACNA1C-217ENST00000399641 DRC7Q8IY82 874 aa14.55□□□□□ -0.08
CACNA1C-217ENST00000399641 PNNQ9H307 717 aaKnown RBP14.54□□□□□ -0.08
CACNA1C-217ENST00000399641 POGKQ9P215 609 aa14.53□□□□□ -0.08
CACNA1C-217ENST00000399641 LAS1LQ9Y4W2 734 aaKnown RBP14.53□□□□□ -0.08
CACNA1C-217ENST00000399641 MEX3CQ5U5Q3 659 aaKnown RBP14.52□□□□□ -0.08
CACNA1C-217ENST00000399641 HDGFP51858 240 aaKnown RBP14.52□□□□□ -0.09
CACNA1C-217ENST00000399641 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
CACNA1C-217ENST00000399641 TAF7LQ5H9L4 462 aa14.5□□□□□ -0.09
CACNA1C-217ENST00000399641 EIF4G2P78344 907 aaKnown RBP eCLIP14.49□□□□□ -0.09
CACNA1C-217ENST00000399641 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
CACNA1C-217ENST00000399641 BECN1Q14457 450 aa14.47□□□□□ -0.09
CACNA1C-217ENST00000399641 FGD1P98174 961 aa14.47□□□□□ -0.09
CACNA1C-217ENST00000399641 TONSLQ96HA7 1378 aa14.45□□□□□ -0.1
CACNA1C-217ENST00000399641 CSB-PGBD3P0DP91 1061 aa14.44□□□□□ -0.1
CACNA1C-217ENST00000399641 G3V3G9 751 aa14.44□□□□□ -0.1
CACNA1C-217ENST00000399641 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
CACNA1C-217ENST00000399641 KIAA2012Q0VF49 1180 aa14.44□□□□□ -0.1
CACNA1C-217ENST00000399641 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
CACNA1C-217ENST00000399641 SOX12O15370 315 aa14.42□□□□□ -0.1
CACNA1C-217ENST00000399641 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
CACNA1C-217ENST00000399641 ACIN1Q9UKV3 1341 aaKnown RBP14.42□□□□□ -0.1
CACNA1C-217ENST00000399641 CASC1Q6TDU7 716 aa14.41□□□□□ -0.1
CACNA1C-217ENST00000399641 CHAF1AQ13111 956 aaPredicted RBP14.41□□□□□ -0.1
CACNA1C-217ENST00000399641 RGL3Q3MIN7 710 aa14.41□□□□□ -0.1
CACNA1C-217ENST00000399641 MSH5O43196 834 aa14.41□□□□□ -0.1
CACNA1C-217ENST00000399641 MTUS2Q5JR59 1369 aa14.4□□□□□ -0.1
CACNA1C-217ENST00000399641 CREBRFQ8IUR6 639 aa14.39□□□□□ -0.11
CACNA1C-217ENST00000399641 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
CACNA1C-217ENST00000399641 OS9Q13438 667 aaPredicted RBP14.38□□□□□ -0.11
CACNA1C-217ENST00000399641 ZNF330Q9Y3S2 320 aaPredicted RBP14.38□□□□□ -0.11
CACNA1C-217ENST00000399641 CFAP53Q96M91 514 aa14.36□□□□□ -0.11
CACNA1C-217ENST00000399641 KCNJ4P48050 445 aa14.36□□□□□ -0.11
CACNA1C-217ENST00000399641 DDRGK1Q96HY6 314 aa14.36□□□□□ -0.11
CACNA1C-217ENST00000399641 HSP90AB1P08238 724 aaKnown RBP14.36□□□□□ -0.11
CACNA1C-217ENST00000399641 APPP05067 770 aa14.35□□□□□ -0.11
CACNA1C-217ENST00000399641 MSNP26038 577 aaKnown RBP14.34□□□□□ -0.11
CACNA1C-217ENST00000399641 GNL2Q13823 731 aaKnown RBP14.33□□□□□ -0.11
CACNA1C-217ENST00000399641 GOLGA6L4A6NEF3 574 aa14.33□□□□□ -0.12
CACNA1C-217ENST00000399641 NRDCO43847 1150 aa14.32□□□□□ -0.12
CACNA1C-217ENST00000399641 DDX10Q13206 875 aaKnown RBP14.31□□□□□ -0.12
CACNA1C-217ENST00000399641 PTMSP20962 102 aa14.3□□□□□ -0.12
CACNA1C-217ENST00000399641 FOXD1Q16676 465 aa14.3□□□□□ -0.12
CACNA1C-217ENST00000399641 CFDP1Q9UEE9 299 aaPredicted RBP14.27□□□□□ -0.12
CACNA1C-217ENST00000399641 DCAF1Q9Y4B6 1507 aa14.27□□□□□ -0.13
CACNA1C-217ENST00000399641 RRP7BPQ9NSQ0 103 aa14.27□□□□□ -0.13
CACNA1C-217ENST00000399641 L1TD1Q5T7N2 865 aaKnown RBP14.26□□□□□ -0.13
CACNA1C-217ENST00000399641 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
CACNA1C-217ENST00000399641 GOLGA6L1Q8N7Z2 621 aa14.26□□□□□ -0.13
CACNA1C-217ENST00000399641 GGT6Q6P531 493 aa14.26□□□□□ -0.13
CACNA1C-217ENST00000399641 HSP90B1P14625 803 aaKnown RBP14.25□□□□□ -0.13
CACNA1C-217ENST00000399641 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
CACNA1C-217ENST00000399641 ANP32EQ9BTT0 268 aa14.25□□□□□ -0.13
CACNA1C-217ENST00000399641 KANK1Q14678 1352 aa14.25□□□□□ -0.13
CACNA1C-217ENST00000399641 HIRIP3Q9BW71 556 aaPredicted RBP14.25□□□□□ -0.13
CACNA1C-217ENST00000399641 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms