RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 ZBTB7CA1YPR0 619 aa18.99■□□□□ 0.63
TNRC18-203ENST00000399537 PTMAP06454 111 aaKnown RBP18.98■□□□□ 0.63
TNRC18-203ENST00000399537 KDM2AQ9Y2K7 1162 aa18.98■□□□□ 0.63
TNRC18-203ENST00000399537 ZRSR1Q15695 479 aaKnown RBP18.97■□□□□ 0.63
TNRC18-203ENST00000399537 NPM1P06748 294 aaKnown RBP eCLIP18.96■□□□□ 0.63
TNRC18-203ENST00000399537 CHIC2Q9UKJ5 165 aa18.96■□□□□ 0.63
TNRC18-203ENST00000399537 C14orf37Q86TY3 774 aa18.95■□□□□ 0.62
TNRC18-203ENST00000399537 CLIP1P30622 1438 aa18.94■□□□□ 0.62
TNRC18-203ENST00000399537 ANP32EQ9BTT0 268 aa18.93■□□□□ 0.62
TNRC18-203ENST00000399537 PLEKHG5O94827 1062 aa18.92■□□□□ 0.62
TNRC18-203ENST00000399537 CASC1Q6TDU7 716 aa18.92■□□□□ 0.62
TNRC18-203ENST00000399537 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
TNRC18-203ENST00000399537 TPRNQ4KMQ1 711 aa18.9■□□□□ 0.62
TNRC18-203ENST00000399537 TULP1O00294 542 aaPredicted RBP18.89■□□□□ 0.61
TNRC18-203ENST00000399537 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
TNRC18-203ENST00000399537 HIRIP3Q9BW71 556 aaPredicted RBP18.88■□□□□ 0.61
TNRC18-203ENST00000399537 DNTTIP2Q5QJE6 756 aaKnown RBP18.86■□□□□ 0.61
TNRC18-203ENST00000399537 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
TNRC18-203ENST00000399537 MTUS2Q5JR59 1369 aa18.82■□□□□ 0.6
TNRC18-203ENST00000399537 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
TNRC18-203ENST00000399537 NAP1L5Q96NT1 182 aaPredicted RBP18.78■□□□□ 0.6
TNRC18-203ENST00000399537 LAS1LQ9Y4W2 734 aaKnown RBP18.78■□□□□ 0.6
TNRC18-203ENST00000399537 CEP162Q5TB80 1403 aa18.77■□□□□ 0.6
TNRC18-203ENST00000399537 GOLGA6L6A8MZA4 724 aa18.77■□□□□ 0.59
TNRC18-203ENST00000399537 TSPY4P0CV99 314 aa18.76■□□□□ 0.59
TNRC18-203ENST00000399537 TSPY10P0CW01 314 aa18.76■□□□□ 0.59
TNRC18-203ENST00000399537 RTN4Q9NQC3 1192 aaKnown RBP18.74■□□□□ 0.59
TNRC18-203ENST00000399537 EIF4G2P78344 907 aaKnown RBP eCLIP18.74■□□□□ 0.593e-7■■□□□ 13.7
TNRC18-203ENST00000399537 CFAP53Q96M91 514 aa18.74■□□□□ 0.59
TNRC18-203ENST00000399537 HAP1P54257 671 aaPredicted RBP18.73■□□□□ 0.59
TNRC18-203ENST00000399537 GOLGA3Q08378 1498 aa18.73■□□□□ 0.59
TNRC18-203ENST00000399537 ERICH6BQ5W0A0 696 aa18.71■□□□□ 0.59
TNRC18-203ENST00000399537 NOP58Q9Y2X3 529 aaKnown RBP18.71■□□□□ 0.59
TNRC18-203ENST00000399537 TAOK2Q9UL54 1235 aa18.7■□□□□ 0.58
TNRC18-203ENST00000399537 SENP3-EIF4A1A0A087X0R7 540 aa18.69■□□□□ 0.58
TNRC18-203ENST00000399537 SUPT16HQ9Y5B9 1047 aaKnown RBP18.68■□□□□ 0.58
TNRC18-203ENST00000399537 RRP7BPQ9NSQ0 103 aa18.67■□□□□ 0.58
TNRC18-203ENST00000399537 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
TNRC18-203ENST00000399537 KNSTRNQ9Y448 316 aa18.66■□□□□ 0.58
TNRC18-203ENST00000399537 NPHP1O15259 732 aa18.64■□□□□ 0.57
TNRC18-203ENST00000399537 HSP90AB1P08238 724 aaKnown RBP18.63■□□□□ 0.57
TNRC18-203ENST00000399537 FGD1P98174 961 aa18.63■□□□□ 0.57
TNRC18-203ENST00000399537 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
TNRC18-203ENST00000399537 OS9Q13438 667 aaPredicted RBP18.62■□□□□ 0.57
TNRC18-203ENST00000399537 NRDCO43847 1150 aa18.61■□□□□ 0.57
TNRC18-203ENST00000399537 NAP1L2Q9ULW6 460 aaPredicted RBP18.61■□□□□ 0.57
TNRC18-203ENST00000399537 PPP4R2Q9NY27 417 aa18.6■□□□□ 0.57
TNRC18-203ENST00000399537 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
TNRC18-203ENST00000399537 MAPK8IP3Q9UPT6 1336 aa18.6■□□□□ 0.57
TNRC18-203ENST00000399537 CHAF1AQ13111 956 aaPredicted RBP18.59■□□□□ 0.57
TNRC18-203ENST00000399537 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
TNRC18-203ENST00000399537 CLSTN1O94985 981 aa18.59■□□□□ 0.57
TNRC18-203ENST00000399537 RGS3P49796 1198 aa18.59■□□□□ 0.57
TNRC18-203ENST00000399537 EEA1Q15075 1411 aa18.58■□□□□ 0.57
TNRC18-203ENST00000399537 CHMP7Q8WUX9 453 aaPredicted RBP18.58■□□□□ 0.56
TNRC18-203ENST00000399537 KCNJ4P48050 445 aa18.58■□□□□ 0.56
TNRC18-203ENST00000399537 ARID4BQ4LE39 1312 aaPredicted RBP18.56■□□□□ 0.56
TNRC18-203ENST00000399537 RGL3Q3MIN7 710 aa18.55■□□□□ 0.56
TNRC18-203ENST00000399537 GOLGA2Q08379 1002 aa18.54■□□□□ 0.56
TNRC18-203ENST00000399537 NEUROD2Q15784 382 aa18.54■□□□□ 0.56
TNRC18-203ENST00000399537 KCNH8Q96L42 1107 aa18.52■□□□□ 0.56
TNRC18-203ENST00000399537 FRAT1Q92837 279 aaPredicted RBP18.51■□□□□ 0.55
TNRC18-203ENST00000399537 CHMP4BQ9H444 224 aaKnown RBP18.51■□□□□ 0.55
TNRC18-203ENST00000399537 GOLGA6L4A6NEF3 574 aa18.51■□□□□ 0.55
TNRC18-203ENST00000399537 DEKP35659 375 aaKnown RBP18.51■□□□□ 0.55
TNRC18-203ENST00000399537 HSCBQ8IWL3 235 aa18.5■□□□□ 0.55
TNRC18-203ENST00000399537 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
TNRC18-203ENST00000399537 DRC7Q8IY82 874 aa18.48■□□□□ 0.55
TNRC18-203ENST00000399537 CEP164Q9UPV0 1460 aa18.48■□□□□ 0.55
TNRC18-203ENST00000399537 LMOD2Q6P5Q4 547 aa18.47■□□□□ 0.55
TNRC18-203ENST00000399537 NUDCQ9Y266 331 aa18.46■□□□□ 0.55
TNRC18-203ENST00000399537 B4GALNT3Q6L9W6 998 aa18.46■□□□□ 0.55
TNRC18-203ENST00000399537 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
TNRC18-203ENST00000399537 POGKQ9P215 609 aa18.45■□□□□ 0.54
TNRC18-203ENST00000399537 MSNP26038 577 aaKnown RBP18.45■□□□□ 0.54
TNRC18-203ENST00000399537 MS4A1P11836 297 aa18.44■□□□□ 0.54
TNRC18-203ENST00000399537 RB1CC1Q8TDY2 1594 aa18.43■□□□□ 0.54
TNRC18-203ENST00000399537 MCCP23508 829 aa18.42■□□□□ 0.54
TNRC18-203ENST00000399537 CC2D1BQ5T0F9 858 aaKnown RBP18.41■□□□□ 0.54
TNRC18-203ENST00000399537 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
TNRC18-203ENST00000399537 GNL2Q13823 731 aaKnown RBP18.41■□□□□ 0.54
TNRC18-203ENST00000399537 L1TD1Q5T7N2 865 aaKnown RBP18.4■□□□□ 0.54
TNRC18-203ENST00000399537 PLEKHD1A6NEE1 506 aa18.4■□□□□ 0.54
TNRC18-203ENST00000399537 ISY1Q9ULR0 285 aaKnown RBP18.4■□□□□ 0.54
TNRC18-203ENST00000399537 KIAA2012Q0VF49 1180 aa18.39■□□□□ 0.53
TNRC18-203ENST00000399537 U2SURPO15042 1029 aaKnown RBP18.38■□□□□ 0.53
TNRC18-203ENST00000399537 TNIKQ9UKE5 1360 aa18.38■□□□□ 0.53
TNRC18-203ENST00000399537 PNNQ9H307 717 aaKnown RBP18.38■□□□□ 0.53
TNRC18-203ENST00000399537 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.531e-6■■■■■ 58.5
TNRC18-203ENST00000399537 NOC3LQ8WTT2 800 aaKnown RBP18.38■□□□□ 0.53
TNRC18-203ENST00000399537 SPRYD3Q8NCJ5 442 aa18.37■□□□□ 0.53
TNRC18-203ENST00000399537 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
TNRC18-203ENST00000399537 CFDP1Q9UEE9 299 aaPredicted RBP18.35■□□□□ 0.53
TNRC18-203ENST00000399537 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
TNRC18-203ENST00000399537 RBM19Q9Y4C8 960 aaKnown RBP18.32■□□□□ 0.52
TNRC18-203ENST00000399537 SIN3AQ96ST3 1273 aa18.32■□□□□ 0.52
TNRC18-203ENST00000399537 CCNB3Q8WWL7 1395 aa18.3■□□□□ 0.52
TNRC18-203ENST00000399537 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
TNRC18-203ENST00000399537 KANK1Q14678 1352 aa18.29■□□□□ 0.52
TNRC18-203ENST00000399537 KIAA1211Q6ZU35 1233 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms