RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 PLEKHG5O94827 1062 aa17.61■□□□□ 0.41
ITSN1-208ENST00000399349 EIF4G2P78344 907 aaKnown RBP eCLIP17.57■□□□□ 0.4
ITSN1-208ENST00000399349 CLIP1P30622 1438 aa17.56■□□□□ 0.4
ITSN1-208ENST00000399349 RGL3Q3MIN7 710 aa17.55■□□□□ 0.4
ITSN1-208ENST00000399349 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
ITSN1-208ENST00000399349 KCNH8Q96L42 1107 aa17.51■□□□□ 0.39
ITSN1-208ENST00000399349 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
ITSN1-208ENST00000399349 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
ITSN1-208ENST00000399349 A0A0G2JS52 829 aa17.47■□□□□ 0.39
ITSN1-208ENST00000399349 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.39
ITSN1-208ENST00000399349 SUPT16HQ9Y5B9 1047 aaKnown RBP17.45■□□□□ 0.38
ITSN1-208ENST00000399349 C14orf37Q86TY3 774 aa17.41■□□□□ 0.38
ITSN1-208ENST00000399349 CEP162Q5TB80 1403 aa17.4■□□□□ 0.38
ITSN1-208ENST00000399349 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
ITSN1-208ENST00000399349 SIN3AQ96ST3 1273 aa17.39■□□□□ 0.37
ITSN1-208ENST00000399349 NEUROD2Q15784 382 aa17.38■□□□□ 0.37
ITSN1-208ENST00000399349 PPM1GO15355 546 aaPredicted RBP17.37■□□□□ 0.37
ITSN1-208ENST00000399349 PPP1R15AO75807 674 aaPredicted RBP17.35■□□□□ 0.37
ITSN1-208ENST00000399349 PLEKHD1A6NEE1 506 aa17.34■□□□□ 0.37
ITSN1-208ENST00000399349 CARD11Q9BXL7 1154 aa17.32■□□□□ 0.36
ITSN1-208ENST00000399349 TPRNQ4KMQ1 711 aa17.31■□□□□ 0.36
ITSN1-208ENST00000399349 CFDP1Q9UEE9 299 aaPredicted RBP17.31■□□□□ 0.36
ITSN1-208ENST00000399349 KNSTRNQ9Y448 316 aa17.3■□□□□ 0.36
ITSN1-208ENST00000399349 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
ITSN1-208ENST00000399349 GLIPR1L2Q4G1C9 344 aa17.28■□□□□ 0.36
ITSN1-208ENST00000399349 TNNT2P45379 298 aaPredicted RBP17.28■□□□□ 0.36
ITSN1-208ENST00000399349 BECN1Q14457 450 aa17.27■□□□□ 0.36
ITSN1-208ENST00000399349 RGS3P49796 1198 aa17.27■□□□□ 0.35
ITSN1-208ENST00000399349 NCLP19338 710 aaKnown RBP17.26■□□□□ 0.35
ITSN1-208ENST00000399349 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
ITSN1-208ENST00000399349 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
ITSN1-208ENST00000399349 LAS1LQ9Y4W2 734 aaKnown RBP17.25■□□□□ 0.35
ITSN1-208ENST00000399349 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
ITSN1-208ENST00000399349 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
ITSN1-208ENST00000399349 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
ITSN1-208ENST00000399349 TRIM44Q96DX7 344 aaPredicted RBP17.22■□□□□ 0.35
ITSN1-208ENST00000399349 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
ITSN1-208ENST00000399349 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
ITSN1-208ENST00000399349 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.35
ITSN1-208ENST00000399349 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.35
ITSN1-208ENST00000399349 RBM19Q9Y4C8 960 aaKnown RBP17.21■□□□□ 0.35
ITSN1-208ENST00000399349 RTN4Q9NQC3 1192 aaKnown RBP17.19■□□□□ 0.34
ITSN1-208ENST00000399349 GOLGA6L22H0YM25 854 aa17.17■□□□□ 0.34
ITSN1-208ENST00000399349 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
ITSN1-208ENST00000399349 EEA1Q15075 1411 aa17.16■□□□□ 0.34
ITSN1-208ENST00000399349 CDCA8Q53HL2 280 aa17.16■□□□□ 0.34
ITSN1-208ENST00000399349 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
ITSN1-208ENST00000399349 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
ITSN1-208ENST00000399349 TAOK2Q9UL54 1235 aa17.14■□□□□ 0.33
ITSN1-208ENST00000399349 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
ITSN1-208ENST00000399349 MAPK8IP3Q9UPT6 1336 aa17.13■□□□□ 0.33
ITSN1-208ENST00000399349 U2SURPO15042 1029 aaKnown RBP17.12■□□□□ 0.33
ITSN1-208ENST00000399349 DEKP35659 375 aaKnown RBP17.12■□□□□ 0.33
ITSN1-208ENST00000399349 HAP1P54257 671 aaPredicted RBP17.11■□□□□ 0.33
ITSN1-208ENST00000399349 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
ITSN1-208ENST00000399349 PTMAP06454 111 aaKnown RBP17.11■□□□□ 0.33
ITSN1-208ENST00000399349 POGKQ9P215 609 aa17.11■□□□□ 0.33
ITSN1-208ENST00000399349 DCAF11Q8TEB1 546 aa17.1■□□□□ 0.33
ITSN1-208ENST00000399349 CDK11BP21127 795 aaKnown RBP17.08■□□□□ 0.32
ITSN1-208ENST00000399349 NUDCQ9Y266 331 aa17.07■□□□□ 0.32
ITSN1-208ENST00000399349 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
ITSN1-208ENST00000399349 SOX12O15370 315 aa17.06■□□□□ 0.32
ITSN1-208ENST00000399349 PLCB2Q00722 1185 aa17.06■□□□□ 0.32
ITSN1-208ENST00000399349 DNTTIP2Q5QJE6 756 aaKnown RBP17.05■□□□□ 0.32
ITSN1-208ENST00000399349 NOP58Q9Y2X3 529 aaKnown RBP17.05■□□□□ 0.32
ITSN1-208ENST00000399349 SAFB2Q14151 953 aaKnown RBP eCLIP17.04■□□□□ 0.32
ITSN1-208ENST00000399349 CASC1Q6TDU7 716 aa17.04■□□□□ 0.32
ITSN1-208ENST00000399349 FOXD1Q16676 465 aa17.03■□□□□ 0.32
ITSN1-208ENST00000399349 CCNB3Q8WWL7 1395 aa17.03■□□□□ 0.32
ITSN1-208ENST00000399349 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
ITSN1-208ENST00000399349 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.31
ITSN1-208ENST00000399349 TULP1O00294 542 aaPredicted RBP17.02■□□□□ 0.31
ITSN1-208ENST00000399349 SPRYD3Q8NCJ5 442 aa17■□□□□ 0.31
ITSN1-208ENST00000399349 SOGA1O94964 1423 aa16.98■□□□□ 0.31
ITSN1-208ENST00000399349 TMF1P82094 1093 aa16.97■□□□□ 0.31
ITSN1-208ENST00000399349 NAP1L5Q96NT1 182 aaPredicted RBP16.97■□□□□ 0.31
ITSN1-208ENST00000399349 HSP90AB1P08238 724 aaKnown RBP16.97■□□□□ 0.31
ITSN1-208ENST00000399349 OS9Q13438 667 aaPredicted RBP16.97■□□□□ 0.31
ITSN1-208ENST00000399349 HSPA5P11021 654 aaKnown RBP16.97■□□□□ 0.31
ITSN1-208ENST00000399349 ERICH6BQ5W0A0 696 aa16.97■□□□□ 0.31
ITSN1-208ENST00000399349 MLECQ14165 292 aa16.96■□□□□ 0.31
ITSN1-208ENST00000399349 KANK4Q5T7N3 995 aaPredicted RBP16.96■□□□□ 0.3
ITSN1-208ENST00000399349 FGD1P98174 961 aa16.94■□□□□ 0.3
ITSN1-208ENST00000399349 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
ITSN1-208ENST00000399349 NAP1L2Q9ULW6 460 aaPredicted RBP16.94■□□□□ 0.3
ITSN1-208ENST00000399349 KCNJ4P48050 445 aa16.93■□□□□ 0.3
ITSN1-208ENST00000399349 APBB1O00213 710 aa16.91■□□□□ 0.3
ITSN1-208ENST00000399349 RB1CC1Q8TDY2 1594 aa16.91■□□□□ 0.3
ITSN1-208ENST00000399349 MORC1Q86VD1 984 aa16.91■□□□□ 0.3
ITSN1-208ENST00000399349 PKD2Q13563 968 aa16.9■□□□□ 0.3
ITSN1-208ENST00000399349 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
ITSN1-208ENST00000399349 STK26Q9P289 416 aa16.89■□□□□ 0.3
ITSN1-208ENST00000399349 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
ITSN1-208ENST00000399349 GGT6Q6P531 493 aa16.88■□□□□ 0.29
ITSN1-208ENST00000399349 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.87■□□□□ 0.29
ITSN1-208ENST00000399349 NPHP1O15259 732 aa16.86■□□□□ 0.29
ITSN1-208ENST00000399349 CCER2I3L3R5 266 aa16.86■□□□□ 0.29
ITSN1-208ENST00000399349 MS4A1P11836 297 aa16.86■□□□□ 0.29
ITSN1-208ENST00000399349 CUX2O14529 1486 aa16.86■□□□□ 0.29
ITSN1-208ENST00000399349 EIF4G1Q04637 1599 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms