RNA–Protein interactions for RNA: ENST00000398594.3

PCDHGB7-201, Transcript of protocadherin gamma subfamily B, 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB7, Length 4,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7-201ENST00000398594 PLEKHG5O94827 1062 aa19.56■□□□□ 0.72
PCDHGB7-201ENST00000398594 CUX2O14529 1486 aa19.55■□□□□ 0.72
PCDHGB7-201ENST00000398594 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
PCDHGB7-201ENST00000398594 CARMIL1Q5VZK9 1371 aa19.54■□□□□ 0.72
PCDHGB7-201ENST00000398594 MYO15BQ96JP2 1530 aa19.53■□□□□ 0.72
PCDHGB7-201ENST00000398594 TNIKQ9UKE5 1360 aa19.52■□□□□ 0.72
PCDHGB7-201ENST00000398594 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.71
PCDHGB7-201ENST00000398594 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
PCDHGB7-201ENST00000398594 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
PCDHGB7-201ENST00000398594 TMC1Q8TDI8 760 aa19.51■□□□□ 0.71
PCDHGB7-201ENST00000398594 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
PCDHGB7-201ENST00000398594 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
PCDHGB7-201ENST00000398594 RTL5Q5HYW3 569 aaPredicted RBP19.45■□□□□ 0.7
PCDHGB7-201ENST00000398594 SOGA1O94964 1423 aa19.45■□□□□ 0.7
PCDHGB7-201ENST00000398594 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
PCDHGB7-201ENST00000398594 EIF4G2P78344 907 aaKnown RBP eCLIP19.44■□□□□ 0.7
PCDHGB7-201ENST00000398594 CCDC88BA6NC98 1476 aa19.43■□□□□ 0.7
PCDHGB7-201ENST00000398594 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
PCDHGB7-201ENST00000398594 A0A0G2JS52 829 aa19.4■□□□□ 0.7
PCDHGB7-201ENST00000398594 ZBTB7CA1YPR0 619 aa19.4■□□□□ 0.7
PCDHGB7-201ENST00000398594 MRS2Q9HD23 443 aa19.4■□□□□ 0.7
PCDHGB7-201ENST00000398594 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.69
PCDHGB7-201ENST00000398594 SMARCA2P51531 1590 aa19.37■□□□□ 0.69
PCDHGB7-201ENST00000398594 MLECQ14165 292 aa19.37■□□□□ 0.69
PCDHGB7-201ENST00000398594 CCNB3Q8WWL7 1395 aa19.36■□□□□ 0.69
PCDHGB7-201ENST00000398594 FHAD1B1AJZ9 1412 aa19.31■□□□□ 0.68
PCDHGB7-201ENST00000398594 ACIN1Q9UKV3 1341 aaKnown RBP19.3■□□□□ 0.68
PCDHGB7-201ENST00000398594 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
PCDHGB7-201ENST00000398594 FKBP8Q14318 412 aa19.28■□□□□ 0.68
PCDHGB7-201ENST00000398594 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
PCDHGB7-201ENST00000398594 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
PCDHGB7-201ENST00000398594 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.68
PCDHGB7-201ENST00000398594 HAP1P54257 671 aaPredicted RBP19.25■□□□□ 0.67
PCDHGB7-201ENST00000398594 GGT6Q6P531 493 aa19.24■□□□□ 0.67
PCDHGB7-201ENST00000398594 CARMIL2Q6F5E8 1435 aa19.23■□□□□ 0.67
PCDHGB7-201ENST00000398594 PPM1GO15355 546 aaPredicted RBP19.23■□□□□ 0.67
PCDHGB7-201ENST00000398594 POGKQ9P215 609 aa19.22■□□□□ 0.67
PCDHGB7-201ENST00000398594 LMOD2Q6P5Q4 547 aa19.22■□□□□ 0.67
PCDHGB7-201ENST00000398594 NPM2Q86SE8 214 aaKnown RBP19.21■□□□□ 0.67
PCDHGB7-201ENST00000398594 SENP3-EIF4A1A0A087X0R7 540 aa19.2■□□□□ 0.66
PCDHGB7-201ENST00000398594 MIER1Q8N108 512 aa19.2■□□□□ 0.66
PCDHGB7-201ENST00000398594 CDCA8Q53HL2 280 aa19.18■□□□□ 0.66
PCDHGB7-201ENST00000398594 ATAD2BQ9ULI0 1458 aa19.18■□□□□ 0.66
PCDHGB7-201ENST00000398594 KNSTRNQ9Y448 316 aa19.17■□□□□ 0.66
PCDHGB7-201ENST00000398594 KANK4Q5T7N3 995 aaPredicted RBP19.16■□□□□ 0.66
PCDHGB7-201ENST00000398594 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.15■□□□□ 0.66
PCDHGB7-201ENST00000398594 WIZO95785 1651 aa19.14■□□□□ 0.65
PCDHGB7-201ENST00000398594 DCAF11Q8TEB1 546 aa19.14■□□□□ 0.65
PCDHGB7-201ENST00000398594 EFCAB2Q5VUJ9 269 aa19.13■□□□□ 0.65
PCDHGB7-201ENST00000398594 JPH4Q96JJ6 628 aa19.12■□□□□ 0.65
PCDHGB7-201ENST00000398594 ANP32AP39687 249 aaKnown RBP19.11■□□□□ 0.65
PCDHGB7-201ENST00000398594 CCDC136Q96JN2 1154 aa19.11■□□□□ 0.65
PCDHGB7-201ENST00000398594 CFAP53Q96M91 514 aa19.1■□□□□ 0.65
PCDHGB7-201ENST00000398594 KANK1Q14678 1352 aa19.1■□□□□ 0.65
PCDHGB7-201ENST00000398594 TOP2AP11388 1531 aaKnown RBP19.09■□□□□ 0.65
PCDHGB7-201ENST00000398594 TNNT2P45379 298 aaPredicted RBP19.08■□□□□ 0.64
PCDHGB7-201ENST00000398594 VPS8Q8N3P4 1428 aa19.07■□□□□ 0.64
PCDHGB7-201ENST00000398594 IRX6P78412 446 aaPredicted RBP19.06■□□□□ 0.64
PCDHGB7-201ENST00000398594 SAFB2Q14151 953 aaKnown RBP eCLIP19.06■□□□□ 0.64
PCDHGB7-201ENST00000398594 HSP90AA1P07900 732 aaKnown RBP19.05■□□□□ 0.64
PCDHGB7-201ENST00000398594 NEUROD2Q15784 382 aa19.05■□□□□ 0.64
PCDHGB7-201ENST00000398594 PKD2Q13563 968 aa19.05■□□□□ 0.64
PCDHGB7-201ENST00000398594 FOXD1Q16676 465 aa19.04■□□□□ 0.64
PCDHGB7-201ENST00000398594 UPF2Q9HAU5 1272 aaKnown RBP19.03■□□□□ 0.64
PCDHGB7-201ENST00000398594 FMN1Q68DA7 1419 aa19.03■□□□□ 0.64
PCDHGB7-201ENST00000398594 HDGFP51858 240 aaKnown RBP19.02■□□□□ 0.64
PCDHGB7-201ENST00000398594 ARXQ96QS3 562 aa19.02■□□□□ 0.64
PCDHGB7-201ENST00000398594 CYB5RLQ6IPT4 315 aa19.01■□□□□ 0.63
PCDHGB7-201ENST00000398594 ARHGAP35Q9NRY4 1499 aa19■□□□□ 0.63
PCDHGB7-201ENST00000398594 KIF3BO15066 747 aa18.99■□□□□ 0.63
PCDHGB7-201ENST00000398594 SOX12O15370 315 aa18.99■□□□□ 0.63
PCDHGB7-201ENST00000398594 STK26Q9P289 416 aa18.99■□□□□ 0.63
PCDHGB7-201ENST00000398594 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
PCDHGB7-201ENST00000398594 HNRNPMP52272 730 aaKnown RBP eCLIP18.98■□□□□ 0.63
PCDHGB7-201ENST00000398594 FHOD3Q2V2M9 1422 aa18.98■□□□□ 0.63
PCDHGB7-201ENST00000398594 SRPK2P78362 688 aaKnown RBP18.97■□□□□ 0.63
PCDHGB7-201ENST00000398594 CC2D1BQ5T0F9 858 aaKnown RBP18.97■□□□□ 0.63
PCDHGB7-201ENST00000398594 RAPGEF2Q9Y4G8 1499 aa18.96■□□□□ 0.63
PCDHGB7-201ENST00000398594 MYH16Q9H6N6 1097 aa18.96■□□□□ 0.63
PCDHGB7-201ENST00000398594 NUDCQ9Y266 331 aa18.95■□□□□ 0.62
PCDHGB7-201ENST00000398594 NUP155O75694 1391 aa18.94■□□□□ 0.62
PCDHGB7-201ENST00000398594 SMARCA4P51532 1647 aa18.94■□□□□ 0.62
PCDHGB7-201ENST00000398594 TMF1P82094 1093 aa18.94■□□□□ 0.62
PCDHGB7-201ENST00000398594 LAS1LQ9Y4W2 734 aaKnown RBP18.94■□□□□ 0.62
PCDHGB7-201ENST00000398594 MAPK8IP3Q9UPT6 1336 aa18.93■□□□□ 0.62
PCDHGB7-201ENST00000398594 U2SURPO15042 1029 aaKnown RBP18.93■□□□□ 0.62
PCDHGB7-201ENST00000398594 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
PCDHGB7-201ENST00000398594 OSCARQ8IYS5 282 aa18.92■□□□□ 0.62
PCDHGB7-201ENST00000398594 SPAG9O60271 1321 aaKnown RBP18.9■□□□□ 0.62
PCDHGB7-201ENST00000398594 MPHOSPH9Q99550 1183 aa18.88■□□□□ 0.61
PCDHGB7-201ENST00000398594 ANKRD30AQ9BXX3 1397 aa18.88■□□□□ 0.61
PCDHGB7-201ENST00000398594 PTPRGP23470 1445 aa18.84■□□□□ 0.61
PCDHGB7-201ENST00000398594 WASHC2CQ9Y4E1 1318 aa18.84■□□□□ 0.61
PCDHGB7-201ENST00000398594 TIMELESSQ9UNS1 1208 aa18.83■□□□□ 0.61
PCDHGB7-201ENST00000398594 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
PCDHGB7-201ENST00000398594 NUTM2DQ5VT03 806 aaPredicted RBP18.81■□□□□ 0.6
PCDHGB7-201ENST00000398594 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
PCDHGB7-201ENST00000398594 RSPH4AQ5TD94 716 aa18.8■□□□□ 0.6
PCDHGB7-201ENST00000398594 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
PCDHGB7-201ENST00000398594 MORC1Q86VD1 984 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms