RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ABCC10Q5T3U5 1492 aa24.23■■□□□ 1.47
SEC13-205ENST00000397101 MAPKBP1O60336 1514 aa24.2■■□□□ 1.47
SEC13-205ENST00000397101 NPM1P06748 294 aaKnown RBP eCLIP24.18■■□□□ 1.46
SEC13-205ENST00000397101 RUSC2Q8N2Y8 1516 aa24.18■■□□□ 1.46
SEC13-205ENST00000397101 FAM69CQ0P6D2 419 aa24.17■■□□□ 1.46
SEC13-205ENST00000397101 DIP2BQ9P265 1576 aa24.11■■□□□ 1.45
SEC13-205ENST00000397101 ADCY10Q96PN6 1610 aa24.07■■□□□ 1.44
SEC13-205ENST00000397101 KIAA0586Q9BVV6 1533 aa24.07■■□□□ 1.44
SEC13-205ENST00000397101 IGF1RP08069 1367 aa24■■□□□ 1.43
SEC13-205ENST00000397101 KDM6BO15054 1643 aa23.99■■□□□ 1.43
SEC13-205ENST00000397101 KDM4FA0A1W2PPD8 638 aa23.96■■□□□ 1.43
SEC13-205ENST00000397101 KIF27Q86VH2 1401 aa23.95■■□□□ 1.42
SEC13-205ENST00000397101 CUL7Q14999 1698 aa23.95■■□□□ 1.42
SEC13-205ENST00000397101 PTPRGP23470 1445 aa23.91■■□□□ 1.42
SEC13-205ENST00000397101 ABCC2Q92887 1545 aa23.85■■□□□ 1.41
SEC13-205ENST00000397101 TNIKQ9UKE5 1360 aa23.85■■□□□ 1.41
SEC13-205ENST00000397101 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
SEC13-205ENST00000397101 TSPOAP1O95153 1857 aa23.83■■□□□ 1.4
SEC13-205ENST00000397101 GLI2P10070 1586 aa23.82■■□□□ 1.4
SEC13-205ENST00000397101 PLB1Q6P1J6 1458 aa23.82■■□□□ 1.4
SEC13-205ENST00000397101 CARMIL1Q5VZK9 1371 aa23.82■■□□□ 1.4
SEC13-205ENST00000397101 UHRF1BP1LA0JNW5 1464 aa23.8■■□□□ 1.4
SEC13-205ENST00000397101 ASXL2Q76L83 1435 aa23.78■■□□□ 1.4
SEC13-205ENST00000397101 UACAQ9BZF9 1416 aa23.73■■□□□ 1.39
SEC13-205ENST00000397101 IQGAP2Q13576 1575 aa23.72■■□□□ 1.39
SEC13-205ENST00000397101 PPRC1Q5VV67 1664 aaKnown RBP23.72■■□□□ 1.39
SEC13-205ENST00000397101 KDM5BQ9UGL1 1544 aa23.68■■□□□ 1.38
SEC13-205ENST00000397101 DISP1Q96F81 1524 aa23.67■■□□□ 1.38
SEC13-205ENST00000397101 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
SEC13-205ENST00000397101 EPRSP07814 1512 aaKnown RBP23.65■■□□□ 1.38
SEC13-205ENST00000397101 ADGRL1O94910 1474 aa23.65■■□□□ 1.38
SEC13-205ENST00000397101 TEX14Q8IWB6 1497 aa23.63■■□□□ 1.37
SEC13-205ENST00000397101 ILDR1Q86SU0 546 aaPredicted RBP23.63■■□□□ 1.37
SEC13-205ENST00000397101 COL17A1Q9UMD9 1497 aaPredicted RBP23.62■■□□□ 1.37
SEC13-205ENST00000397101 MAP3K4Q9Y6R4 1608 aa23.62■■□□□ 1.37
SEC13-205ENST00000397101 UGGT2Q9NYU1 1516 aa23.61■■□□□ 1.37
SEC13-205ENST00000397101 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
SEC13-205ENST00000397101 ZCCHC11Q5TAX3 1644 aaKnown RBP23.53■■□□□ 1.36
SEC13-205ENST00000397101 KIAA0556O60303 1618 aa23.51■■□□□ 1.35
SEC13-205ENST00000397101 WDR7Q9Y4E6 1490 aa23.49■■□□□ 1.35
SEC13-205ENST00000397101 HECW2Q9P2P5 1572 aa23.44■■□□□ 1.34
SEC13-205ENST00000397101 MAGI3Q5TCQ9 1506 aa23.44■■□□□ 1.34
SEC13-205ENST00000397101 CD109Q6YHK3 1445 aa23.4■■□□□ 1.34
SEC13-205ENST00000397101 GOLGA3Q08378 1498 aa23.38■■□□□ 1.33
SEC13-205ENST00000397101 CFAP43Q8NDM7 1665 aa23.38■■□□□ 1.33
SEC13-205ENST00000397101 ABCA8O94911 1581 aa23.35■■□□□ 1.33
SEC13-205ENST00000397101 CTTNBP2Q8WZ74 1663 aa23.3■■□□□ 1.32
SEC13-205ENST00000397101 KCNH8Q96L42 1107 aa23.27■■□□□ 1.32
SEC13-205ENST00000397101 ARAP3Q8WWN8 1544 aa23.27■■□□□ 1.32
SEC13-205ENST00000397101 PHLDB1Q86UU1 1377 aa23.25■■□□□ 1.31
SEC13-205ENST00000397101 PRXQ9BXM0 1461 aa23.23■■□□□ 1.31
SEC13-205ENST00000397101 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
SEC13-205ENST00000397101 KIF21BO75037 1637 aa23.17■■□□□ 1.3
SEC13-205ENST00000397101 ATP10BO94823 1461 aa23.16■■□□□ 1.3
SEC13-205ENST00000397101 FBXO41Q8TF61 875 aa23.13■■□□□ 1.29
SEC13-205ENST00000397101 ABCA9Q8IUA7 1624 aa23.12■■□□□ 1.29
SEC13-205ENST00000397101 NEO1Q92859 1461 aa23.11■■□□□ 1.29
SEC13-205ENST00000397101 ADAMTSL3P82987 1691 aa23.1■■□□□ 1.29
SEC13-205ENST00000397101 PTPRMP28827 1452 aa23.1■■□□□ 1.29
SEC13-205ENST00000397101 RAPGEF3O95398 923 aa23.03■■□□□ 1.28
SEC13-205ENST00000397101 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
SEC13-205ENST00000397101 ARID3CA6NKF2 412 aa23■■□□□ 1.27
SEC13-205ENST00000397101 P3H3Q8IVL6 736 aa22.99■■□□□ 1.27
SEC13-205ENST00000397101 BCORL1Q5H9F3 1711 aa22.99■■□□□ 1.27
SEC13-205ENST00000397101 RAPGEF6Q8TEU7 1601 aa22.98■■□□□ 1.27
SEC13-205ENST00000397101 PCF11O94913 1555 aaKnown RBP22.97■■□□□ 1.27
SEC13-205ENST00000397101 FRMPD1Q5SYB0 1578 aa22.97■■□□□ 1.27
SEC13-205ENST00000397101 LMTK3Q96Q04 1460 aa22.93■■□□□ 1.26
SEC13-205ENST00000397101 MADDQ8WXG6 1647 aa22.93■■□□□ 1.26
SEC13-205ENST00000397101 NUP153P49790 1475 aaKnown RBP22.92■■□□□ 1.26
SEC13-205ENST00000397101 ARID4BQ4LE39 1312 aaPredicted RBP22.91■■□□□ 1.26
SEC13-205ENST00000397101 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
SEC13-205ENST00000397101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.9■■□□□ 1.26
SEC13-205ENST00000397101 HNRNPUL2Q1KMD3 747 aaKnown RBP22.9■■□□□ 1.26
SEC13-205ENST00000397101 ARHGEF40Q8TER5 1519 aa22.9■■□□□ 1.26
SEC13-205ENST00000397101 DENND4BO75064 1496 aaPredicted RBP22.9■■□□□ 1.26
SEC13-205ENST00000397101 FHOD3Q2V2M9 1422 aa22.9■■□□□ 1.26
SEC13-205ENST00000397101 AKNAQ7Z591 1439 aa22.86■■□□□ 1.25
SEC13-205ENST00000397101 PLEKHD1A6NEE1 506 aa22.86■■□□□ 1.25
SEC13-205ENST00000397101 POGZQ7Z3K3 1410 aa22.84■■□□□ 1.25
SEC13-205ENST00000397101 RICTORQ6R327 1708 aa22.84■■□□□ 1.25
SEC13-205ENST00000397101 CFAP74Q9C0B2 1584 aa22.84■■□□□ 1.25
SEC13-205ENST00000397101 FANCAO15360 1455 aa22.83■■□□□ 1.25
SEC13-205ENST00000397101 ZMYM4Q5VZL5 1548 aa22.82■■□□□ 1.24
SEC13-205ENST00000397101 MAGI2Q86UL8 1455 aa22.82■■□□□ 1.24
SEC13-205ENST00000397101 EEA1Q15075 1411 aa22.8■■□□□ 1.24
SEC13-205ENST00000397101 RIMS1Q86UR5 1692 aaKnown RBP22.79■■□□□ 1.24
SEC13-205ENST00000397101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.78■■□□□ 1.244e-7■■■■□ 22.2
SEC13-205ENST00000397101 EFCAB5A4FU69 1503 aa22.77■■□□□ 1.24
SEC13-205ENST00000397101 ZFYVE16Q7Z3T8 1539 aa22.75■■□□□ 1.23
SEC13-205ENST00000397101 YEATS2Q9ULM3 1422 aa22.72■■□□□ 1.23
SEC13-205ENST00000397101 HSPA2P54652 639 aa22.71■■□□□ 1.23
SEC13-205ENST00000397101 TTC37Q6PGP7 1564 aa22.71■■□□□ 1.23
SEC13-205ENST00000397101 PLCH2O75038 1416 aa22.69■■□□□ 1.22
SEC13-205ENST00000397101 HECW1Q76N89 1606 aa22.68■■□□□ 1.22
SEC13-205ENST00000397101 CERKQ8TCT0 537 aa22.67■■□□□ 1.22
SEC13-205ENST00000397101 SIGLEC1Q9BZZ2 1709 aa22.67■■□□□ 1.22
SEC13-205ENST00000397101 SCAPERQ9BY12 1400 aa22.65■■□□□ 1.22
SEC13-205ENST00000397101 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
SEC13-205ENST00000397101 ARHGEF12Q9NZN5 1544 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms