RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 KDM2AQ9Y2K7 1162 aa17.61■□□□□ 0.41
GREB1-206ENST00000396123 CCDC136Q96JN2 1154 aa17.6■□□□□ 0.41
GREB1-206ENST00000396123 BAZ1AQ9NRL2 1556 aaPredicted RBP17.59■□□□□ 0.41
GREB1-206ENST00000396123 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
GREB1-206ENST00000396123 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
GREB1-206ENST00000396123 WDR43Q15061 677 aaKnown RBP eCLIP17.52■□□□□ 0.4
GREB1-206ENST00000396123 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.52■□□□□ 0.4
GREB1-206ENST00000396123 UPF2Q9HAU5 1272 aaKnown RBP17.5■□□□□ 0.39
GREB1-206ENST00000396123 IRX6P78412 446 aaPredicted RBP17.49■□□□□ 0.39
GREB1-206ENST00000396123 PLEKHD1A6NEE1 506 aa17.47■□□□□ 0.39
GREB1-206ENST00000396123 SOGA1O94964 1423 aa17.44■□□□□ 0.38
GREB1-206ENST00000396123 HSP90AA1P07900 732 aaKnown RBP17.42■□□□□ 0.38
GREB1-206ENST00000396123 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
GREB1-206ENST00000396123 CFDP1Q9UEE9 299 aaPredicted RBP17.41■□□□□ 0.38
GREB1-206ENST00000396123 SIN3AQ96ST3 1273 aa17.4■□□□□ 0.38
GREB1-206ENST00000396123 CCNB3Q8WWL7 1395 aa17.39■□□□□ 0.37
GREB1-206ENST00000396123 KCNH8Q96L42 1107 aa17.36■□□□□ 0.37
GREB1-206ENST00000396123 RGL3Q3MIN7 710 aa17.36■□□□□ 0.37
GREB1-206ENST00000396123 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
GREB1-206ENST00000396123 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
GREB1-206ENST00000396123 NBR1Q14596 966 aa17.35■□□□□ 0.37
GREB1-206ENST00000396123 ANP32BQ92688 251 aaKnown RBP17.34■□□□□ 0.37
GREB1-206ENST00000396123 CARMIL1Q5VZK9 1371 aa17.32■□□□□ 0.36
GREB1-206ENST00000396123 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
GREB1-206ENST00000396123 CARD11Q9BXL7 1154 aa17.31■□□□□ 0.36
GREB1-206ENST00000396123 VPS8Q8N3P4 1428 aa17.31■□□□□ 0.36
GREB1-206ENST00000396123 SUPT16HQ9Y5B9 1047 aaKnown RBP17.31■□□□□ 0.36
GREB1-206ENST00000396123 TIMELESSQ9UNS1 1208 aa17.29■□□□□ 0.36
GREB1-206ENST00000396123 CUX2O14529 1486 aa17.29■□□□□ 0.36
GREB1-206ENST00000396123 CDCA8Q53HL2 280 aa17.27■□□□□ 0.36
GREB1-206ENST00000396123 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
GREB1-206ENST00000396123 KNSTRNQ9Y448 316 aa17.25■□□□□ 0.35
GREB1-206ENST00000396123 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
GREB1-206ENST00000396123 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
GREB1-206ENST00000396123 EIF5BO60841 1220 aaKnown RBP17.2■□□□□ 0.34
GREB1-206ENST00000396123 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
GREB1-206ENST00000396123 MYH16Q9H6N6 1097 aa17.19■□□□□ 0.34
GREB1-206ENST00000396123 DDRGK1Q96HY6 314 aa17.18■□□□□ 0.34
GREB1-206ENST00000396123 CFAP53Q96M91 514 aa17.18■□□□□ 0.34
GREB1-206ENST00000396123 PPP4R2Q9NY27 417 aa17.18■□□□□ 0.34
GREB1-206ENST00000396123 PPP1R15AO75807 674 aaPredicted RBP17.15■□□□□ 0.34
GREB1-206ENST00000396123 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.34
GREB1-206ENST00000396123 CCER2I3L3R5 266 aa17.14■□□□□ 0.33
GREB1-206ENST00000396123 ARHGAP35Q9NRY4 1499 aa17.14■□□□□ 0.33
GREB1-206ENST00000396123 BECN1Q14457 450 aa17.13■□□□□ 0.33
GREB1-206ENST00000396123 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
GREB1-206ENST00000396123 EIF4G1Q04637 1599 aaKnown RBP17.12■□□□□ 0.33
GREB1-206ENST00000396123 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
GREB1-206ENST00000396123 ARXQ96QS3 562 aa17.1■□□□□ 0.33
GREB1-206ENST00000396123 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
GREB1-206ENST00000396123 DCAF11Q8TEB1 546 aa17.09■□□□□ 0.33
GREB1-206ENST00000396123 ERCC6Q03468 1493 aa17.09■□□□□ 0.33
GREB1-206ENST00000396123 WIZO95785 1651 aa17.08■□□□□ 0.33
GREB1-206ENST00000396123 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
GREB1-206ENST00000396123 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
GREB1-206ENST00000396123 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
GREB1-206ENST00000396123 NEUROD2Q15784 382 aa17.05■□□□□ 0.32
GREB1-206ENST00000396123 TMF1P82094 1093 aa17.04■□□□□ 0.32
GREB1-206ENST00000396123 FMN1Q68DA7 1419 aa17.03■□□□□ 0.32
GREB1-206ENST00000396123 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
GREB1-206ENST00000396123 B4GALNT3Q6L9W6 998 aa17.02■□□□□ 0.32
GREB1-206ENST00000396123 NUDCQ9Y266 331 aa17.02■□□□□ 0.32
GREB1-206ENST00000396123 PPM1GO15355 546 aaPredicted RBP17.02■□□□□ 0.31
GREB1-206ENST00000396123 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
GREB1-206ENST00000396123 PKD2Q13563 968 aa16.99■□□□□ 0.31
GREB1-206ENST00000396123 C14orf37Q86TY3 774 aa16.99■□□□□ 0.31
GREB1-206ENST00000396123 A0A0G2JS52 829 aa16.98■□□□□ 0.31
GREB1-206ENST00000396123 FOXD1Q16676 465 aa16.98■□□□□ 0.31
GREB1-206ENST00000396123 POGKQ9P215 609 aa16.98■□□□□ 0.31
GREB1-206ENST00000396123 ARID4BQ4LE39 1312 aaPredicted RBP16.97■□□□□ 0.31
GREB1-206ENST00000396123 MPHOSPH9Q99550 1183 aa16.97■□□□□ 0.31
GREB1-206ENST00000396123 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
GREB1-206ENST00000396123 RGS3P49796 1198 aa16.97■□□□□ 0.31
GREB1-206ENST00000396123 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
GREB1-206ENST00000396123 FRAT1Q92837 279 aaPredicted RBP16.96■□□□□ 0.31
GREB1-206ENST00000396123 ZBTB7CA1YPR0 619 aa16.96■□□□□ 0.3
GREB1-206ENST00000396123 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
GREB1-206ENST00000396123 GOLGA6L22H0YM25 854 aa16.95■□□□□ 0.3
GREB1-206ENST00000396123 KANK1Q14678 1352 aa16.95■□□□□ 0.3
GREB1-206ENST00000396123 NOP58Q9Y2X3 529 aaKnown RBP16.94■□□□□ 0.3
GREB1-206ENST00000396123 RAPGEF2Q9Y4G8 1499 aa16.94■□□□□ 0.3
GREB1-206ENST00000396123 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
GREB1-206ENST00000396123 CARMIL2Q6F5E8 1435 aa16.92■□□□□ 0.3
GREB1-206ENST00000396123 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
GREB1-206ENST00000396123 MS4A1P11836 297 aa16.91■□□□□ 0.3
GREB1-206ENST00000396123 GLIPR1L2Q4G1C9 344 aa16.91■□□□□ 0.3
GREB1-206ENST00000396123 U2SURPO15042 1029 aaKnown RBP16.9■□□□□ 0.3
GREB1-206ENST00000396123 NCLP19338 710 aaKnown RBP16.9■□□□□ 0.3
GREB1-206ENST00000396123 ERICH6BQ5W0A0 696 aa16.9■□□□□ 0.3
GREB1-206ENST00000396123 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
GREB1-206ENST00000396123 CASC1Q6TDU7 716 aa16.89■□□□□ 0.29
GREB1-206ENST00000396123 CHMP4BQ9H444 224 aaKnown RBP16.89■□□□□ 0.29
GREB1-206ENST00000396123 KTN1Q86UP2 1357 aaKnown RBP16.88■□□□□ 0.29
GREB1-206ENST00000396123 TRIM44Q96DX7 344 aaPredicted RBP16.88■□□□□ 0.29
GREB1-206ENST00000396123 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
GREB1-206ENST00000396123 NUP155O75694 1391 aa16.88■□□□□ 0.29
GREB1-206ENST00000396123 PNNQ9H307 717 aaKnown RBP16.87■□□□□ 0.29
GREB1-206ENST00000396123 ANKRD30AQ9BXX3 1397 aa16.87■□□□□ 0.29
GREB1-206ENST00000396123 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
GREB1-206ENST00000396123 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms