RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 BAZ1BQ9UIG0 1483 aaKnown RBP10.21□□□□□ -0.78
BDNF-207ENST00000395986 ANP32AP39687 249 aaKnown RBP10.2□□□□□ -0.78
BDNF-207ENST00000395986 MROH2BQ7Z745 1585 aa10.2□□□□□ -0.78
BDNF-207ENST00000395986 VSIG10Q8N0Z9 540 aa10.18□□□□□ -0.78
BDNF-207ENST00000395986 BAZ1AQ9NRL2 1556 aaPredicted RBP10.16□□□□□ -0.78
BDNF-207ENST00000395986 ARXQ96QS3 562 aa10.16□□□□□ -0.78
BDNF-207ENST00000395986 PEG3Q9GZU2 1588 aa10.14□□□□□ -0.79
BDNF-207ENST00000395986 ARID4BQ4LE39 1312 aaPredicted RBP10.13□□□□□ -0.79
BDNF-207ENST00000395986 FAM9BQ8IZU0 186 aa10.13□□□□□ -0.79
BDNF-207ENST00000395986 PODXL2Q9NZ53 605 aa10.13□□□□□ -0.79
BDNF-207ENST00000395986 ATAD2BQ9ULI0 1458 aa10.12□□□□□ -0.79
BDNF-207ENST00000395986 WIZO95785 1651 aa10.12□□□□□ -0.79
BDNF-207ENST00000395986 A0A0U1RQG5 324 aaPredicted RBP10.11□□□□□ -0.79
BDNF-207ENST00000395986 PPP4R2Q9NY27 417 aa10.11□□□□□ -0.79
BDNF-207ENST00000395986 IPO9Q96P70 1041 aaKnown RBP10.1□□□□□ -0.79
BDNF-207ENST00000395986 RSF1Q96T23 1441 aaPredicted RBP10.1□□□□□ -0.79
BDNF-207ENST00000395986 NCAPD3P42695 1498 aa10.09□□□□□ -0.79
BDNF-207ENST00000395986 DHX57Q6P158 1386 aaKnown RBP10.09□□□□□ -0.79
BDNF-207ENST00000395986 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
BDNF-207ENST00000395986 ZMYND15Q9H091 742 aa10.07□□□□□ -0.8
BDNF-207ENST00000395986 SLC4A3P48751 1232 aa10.07□□□□□ -0.8
BDNF-207ENST00000395986 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
BDNF-207ENST00000395986 HMGXB3Q12766 1538 aa10.04□□□□□ -0.8
BDNF-207ENST00000395986 SOGA1O94964 1423 aa10.04□□□□□ -0.8
BDNF-207ENST00000395986 WRNQ14191 1432 aaPredicted RBP eCLIP10.01□□□□□ -0.81
BDNF-207ENST00000395986 GLIPR1L2Q4G1C9 344 aa10□□□□□ -0.81
BDNF-207ENST00000395986 CCDC184Q52MB2 194 aa10□□□□□ -0.81
BDNF-207ENST00000395986 POLR3GLQ9BT43 218 aa10□□□□□ -0.81
BDNF-207ENST00000395986 PPP1R15AO75807 674 aaPredicted RBP9.99□□□□□ -0.81
BDNF-207ENST00000395986 FRAT1Q92837 279 aaPredicted RBP9.99□□□□□ -0.81
BDNF-207ENST00000395986 SKAP1Q86WV1 359 aa9.99□□□□□ -0.81
BDNF-207ENST00000395986 NAP1L5Q96NT1 182 aaPredicted RBP9.98□□□□□ -0.81
BDNF-207ENST00000395986 KANK4Q5T7N3 995 aaPredicted RBP9.97□□□□□ -0.81
BDNF-207ENST00000395986 DAXXQ9UER7 740 aaPredicted RBP9.97□□□□□ -0.81
BDNF-207ENST00000395986 GSE1Q14687 1217 aa9.97□□□□□ -0.81
BDNF-207ENST00000395986 RUSC2Q8N2Y8 1516 aa9.97□□□□□ -0.81
BDNF-207ENST00000395986 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
BDNF-207ENST00000395986 TNIKQ9UKE5 1360 aa9.96□□□□□ -0.81
BDNF-207ENST00000395986 CCDC88BA6NC98 1476 aa9.96□□□□□ -0.81
BDNF-207ENST00000395986 CCER2I3L3R5 266 aa9.96□□□□□ -0.82
BDNF-207ENST00000395986 ATP1B4Q9UN42 357 aaPredicted RBP9.95□□□□□ -0.82
BDNF-207ENST00000395986 MRS2Q9HD23 443 aa9.94□□□□□ -0.82
BDNF-207ENST00000395986 FAM50AQ14320 339 aaKnown RBP9.94□□□□□ -0.82
BDNF-207ENST00000395986 TOP2AP11388 1531 aaKnown RBP9.93□□□□□ -0.82
BDNF-207ENST00000395986 RSPH6AQ9H0K4 717 aa9.92□□□□□ -0.82
BDNF-207ENST00000395986 ARID3AQ99856 593 aa9.92□□□□□ -0.82
BDNF-207ENST00000395986 WASHC2AQ641Q2 1341 aa9.91□□□□□ -0.82
BDNF-207ENST00000395986 CLIP1P30622 1438 aa9.9□□□□□ -0.82
BDNF-207ENST00000395986 NFKBIBQ15653 356 aa9.9□□□□□ -0.82
BDNF-207ENST00000395986 HSP90AA2PQ14568 343 aaPredicted RBP9.9□□□□□ -0.82
BDNF-207ENST00000395986 DCAF11Q8TEB1 546 aa9.9□□□□□ -0.83
BDNF-207ENST00000395986 NESP48681 1621 aa9.88□□□□□ -0.83
BDNF-207ENST00000395986 PPM1GO15355 546 aaPredicted RBP9.88□□□□□ -0.83
BDNF-207ENST00000395986 AKNAQ7Z591 1439 aa9.87□□□□□ -0.83
BDNF-207ENST00000395986 FRAT2O75474 233 aaPredicted RBP9.87□□□□□ -0.83
BDNF-207ENST00000395986 PDE4AP27815 886 aa9.86□□□□□ -0.83
BDNF-207ENST00000395986 WASHC2CQ9Y4E1 1318 aa9.85□□□□□ -0.83
BDNF-207ENST00000395986 WDR97A6NE52 1622 aa9.85□□□□□ -0.83
BDNF-207ENST00000395986 RAB3GAP2Q9H2M9 1393 aa9.84□□□□□ -0.83
BDNF-207ENST00000395986 RRAGDQ9NQL2 400 aaPredicted RBP9.83□□□□□ -0.84
BDNF-207ENST00000395986 HSP90AA1P07900 732 aaKnown RBP9.83□□□□□ -0.84
BDNF-207ENST00000395986 USP35Q9P2H5 1018 aa9.83□□□□□ -0.84
BDNF-207ENST00000395986 GZF1Q9H116 711 aaPredicted RBP9.82□□□□□ -0.84
BDNF-207ENST00000395986 EXOC6Q8TAG9 804 aa9.81□□□□□ -0.84
BDNF-207ENST00000395986 RBM10P98175 930 aaKnown RBP9.8□□□□□ -0.84
BDNF-207ENST00000395986 AEBP2Q6ZN18 517 aaPredicted RBP9.8□□□□□ -0.84
BDNF-207ENST00000395986 PNNQ9H307 717 aaKnown RBP9.8□□□□□ -0.84
BDNF-207ENST00000395986 AMER1Q5JTC6 1135 aaPredicted RBP9.8□□□□□ -0.84
BDNF-207ENST00000395986 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
BDNF-207ENST00000395986 TONSLQ96HA7 1378 aa9.79□□□□□ -0.84
BDNF-207ENST00000395986 GOLGA3Q08378 1498 aa9.79□□□□□ -0.84
BDNF-207ENST00000395986 FAM43AQ8N2R8 423 aa9.79□□□□□ -0.84
BDNF-207ENST00000395986 KIF21AQ7Z4S6 1674 aa9.79□□□□□ -0.84
BDNF-207ENST00000395986 VPS8Q8N3P4 1428 aa9.78□□□□□ -0.84
BDNF-207ENST00000395986 POGKQ9P215 609 aa9.78□□□□□ -0.84
BDNF-207ENST00000395986 SLKQ9H2G2 1235 aaPredicted RBP9.77□□□□□ -0.84
BDNF-207ENST00000395986 CFTRP13569 1480 aa9.77□□□□□ -0.85
BDNF-207ENST00000395986 RGS3P49796 1198 aa9.77□□□□□ -0.85
BDNF-207ENST00000395986 CADPSQ9ULU8 1353 aa9.76□□□□□ -0.85
BDNF-207ENST00000395986 PLIN1O60240 522 aa9.76□□□□□ -0.85
BDNF-207ENST00000395986 SPRYD3Q8NCJ5 442 aa9.76□□□□□ -0.85
BDNF-207ENST00000395986 PRDM2Q13029 1718 aa9.76□□□□□ -0.85
BDNF-207ENST00000395986 HSPA5P11021 654 aaKnown RBP9.74□□□□□ -0.85
BDNF-207ENST00000395986 BACH2Q9BYV9 841 aa9.74□□□□□ -0.85
BDNF-207ENST00000395986 CCNB3Q8WWL7 1395 aa9.73□□□□□ -0.85
BDNF-207ENST00000395986 P3H3Q8IVL6 736 aa9.72□□□□□ -0.85
BDNF-207ENST00000395986 THOC2Q8NI27 1593 aaKnown RBP9.72□□□□□ -0.85
BDNF-207ENST00000395986 ZBED9Q6R2W3 1325 aa9.71□□□□□ -0.85
BDNF-207ENST00000395986 ZNF326Q5BKZ1 582 aaKnown RBP9.71□□□□□ -0.86
BDNF-207ENST00000395986 PANK2Q9BZ23 570 aa9.71□□□□□ -0.86
BDNF-207ENST00000395986 PRKRIP1Q9H875 184 aaPredicted RBP9.71□□□□□ -0.86
BDNF-207ENST00000395986 EEA1Q15075 1411 aa9.71□□□□□ -0.86
BDNF-207ENST00000395986 ZBTB7CA1YPR0 619 aa9.71□□□□□ -0.86
BDNF-207ENST00000395986 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
BDNF-207ENST00000395986 NUDCQ9Y266 331 aa9.71□□□□□ -0.86
BDNF-207ENST00000395986 TCERG1O14776 1098 aaKnown RBP9.7□□□□□ -0.86
BDNF-207ENST00000395986 PDE4CQ08493 712 aa9.69□□□□□ -0.86
BDNF-207ENST00000395986 BCL11BQ9C0K0 894 aaPredicted RBP9.67□□□□□ -0.86
BDNF-207ENST00000395986 RRP9O43818 475 aaKnown RBP9.67□□□□□ -0.86
BDNF-207ENST00000395986 PRDM10Q9NQV6 1147 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms