RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
XCR1-202ENST00000395946 PRG4Q92954 1404 aaPredicted RBP12.41□□□□□ -0.42
XCR1-202ENST00000395946 JPH4Q96JJ6 628 aa12.39□□□□□ -0.43
XCR1-202ENST00000395946 MAPKBP1O60336 1514 aa12.37□□□□□ -0.43
XCR1-202ENST00000395946 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
XCR1-202ENST00000395946 CUL7Q14999 1698 aa12.36□□□□□ -0.43
XCR1-202ENST00000395946 KIF27Q86VH2 1401 aa12.36□□□□□ -0.43
XCR1-202ENST00000395946 ABCC10Q5T3U5 1492 aa12.34□□□□□ -0.43
XCR1-202ENST00000395946 NPM1P06748 294 aaKnown RBP eCLIP12.33□□□□□ -0.44
XCR1-202ENST00000395946 KIF13AQ9H1H9 1805 aa12.31□□□□□ -0.44
XCR1-202ENST00000395946 IGF1RP08069 1367 aa12.3□□□□□ -0.44
XCR1-202ENST00000395946 DIP2BQ9P265 1576 aa12.28□□□□□ -0.44
XCR1-202ENST00000395946 ADCY10Q96PN6 1610 aa12.28□□□□□ -0.44
XCR1-202ENST00000395946 CARMIL2Q6F5E8 1435 aa12.26□□□□□ -0.45
XCR1-202ENST00000395946 FAM69CQ0P6D2 419 aa12.25□□□□□ -0.45
XCR1-202ENST00000395946 CARMIL1Q5VZK9 1371 aa12.23□□□□□ -0.45
XCR1-202ENST00000395946 PTPRGP23470 1445 aa12.22□□□□□ -0.45
XCR1-202ENST00000395946 TNIKQ9UKE5 1360 aa12.22□□□□□ -0.45
XCR1-202ENST00000395946 FOXD1Q16676 465 aa12.21□□□□□ -0.45
XCR1-202ENST00000395946 IQGAP2Q13576 1575 aa12.21□□□□□ -0.46
XCR1-202ENST00000395946 ABCC2Q92887 1545 aa12.21□□□□□ -0.46
XCR1-202ENST00000395946 UHRF1BP1LA0JNW5 1464 aa12.21□□□□□ -0.46
XCR1-202ENST00000395946 KDM6BO15054 1643 aa12.19□□□□□ -0.46
XCR1-202ENST00000395946 PLB1Q6P1J6 1458 aa12.19□□□□□ -0.46
XCR1-202ENST00000395946 GLI2P10070 1586 aa12.18□□□□□ -0.46
XCR1-202ENST00000395946 UGGT2Q9NYU1 1516 aa12.15□□□□□ -0.46
XCR1-202ENST00000395946 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
XCR1-202ENST00000395946 UACAQ9BZF9 1416 aa12.14□□□□□ -0.47
XCR1-202ENST00000395946 ASXL2Q76L83 1435 aa12.13□□□□□ -0.47
XCR1-202ENST00000395946 DISP1Q96F81 1524 aa12.13□□□□□ -0.47
XCR1-202ENST00000395946 KDM5BQ9UGL1 1544 aa12.13□□□□□ -0.47
XCR1-202ENST00000395946 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
XCR1-202ENST00000395946 TEX14Q8IWB6 1497 aa12.1□□□□□ -0.47
XCR1-202ENST00000395946 KIAA0556O60303 1618 aa12.09□□□□□ -0.47
XCR1-202ENST00000395946 GOLGA3Q08378 1498 aa12.08□□□□□ -0.48
XCR1-202ENST00000395946 EPRSP07814 1512 aaKnown RBP12.07□□□□□ -0.48
XCR1-202ENST00000395946 MAP3K4Q9Y6R4 1608 aa12.06□□□□□ -0.48
XCR1-202ENST00000395946 PPRC1Q5VV67 1664 aaKnown RBP12.05□□□□□ -0.48
XCR1-202ENST00000395946 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
XCR1-202ENST00000395946 WDR7Q9Y4E6 1490 aa12.04□□□□□ -0.48
XCR1-202ENST00000395946 ZCCHC11Q5TAX3 1644 aaKnown RBP12.04□□□□□ -0.48
XCR1-202ENST00000395946 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
XCR1-202ENST00000395946 CTTNBP2Q8WZ74 1663 aa12.02□□□□□ -0.49
XCR1-202ENST00000395946 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
XCR1-202ENST00000395946 PRXQ9BXM0 1461 aa12□□□□□ -0.49
XCR1-202ENST00000395946 MAGI3Q5TCQ9 1506 aa12□□□□□ -0.49
XCR1-202ENST00000395946 ABCA8O94911 1581 aa11.99□□□□□ -0.49
XCR1-202ENST00000395946 ADGRL1O94910 1474 aa11.98□□□□□ -0.49
XCR1-202ENST00000395946 FAM9AQ8IZU1 332 aaPredicted RBP11.98□□□□□ -0.49
XCR1-202ENST00000395946 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
XCR1-202ENST00000395946 COL17A1Q9UMD9 1497 aaPredicted RBP11.96□□□□□ -0.49
XCR1-202ENST00000395946 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
XCR1-202ENST00000395946 PHLDB1Q86UU1 1377 aa11.93□□□□□ -0.5
XCR1-202ENST00000395946 ARAP3Q8WWN8 1544 aa11.91□□□□□ -0.5
XCR1-202ENST00000395946 EEA1Q15075 1411 aa11.9□□□□□ -0.5
XCR1-202ENST00000395946 SAMD9Q5K651 1589 aa11.88□□□□□ -0.51
XCR1-202ENST00000395946 ABCA9Q8IUA7 1624 aa11.86□□□□□ -0.51
XCR1-202ENST00000395946 ATP10BO94823 1461 aa11.85□□□□□ -0.51
XCR1-202ENST00000395946 NEO1Q92859 1461 aa11.85□□□□□ -0.51
XCR1-202ENST00000395946 HECW2Q9P2P5 1572 aa11.84□□□□□ -0.51
XCR1-202ENST00000395946 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
XCR1-202ENST00000395946 KCNH8Q96L42 1107 aa11.83□□□□□ -0.52
XCR1-202ENST00000395946 RAPGEF6Q8TEU7 1601 aa11.82□□□□□ -0.52
XCR1-202ENST00000395946 EFCAB5A4FU69 1503 aa11.8□□□□□ -0.52
XCR1-202ENST00000395946 NUP153P49790 1475 aaKnown RBP11.78□□□□□ -0.52
XCR1-202ENST00000395946 KIF21BO75037 1637 aa11.78□□□□□ -0.52
XCR1-202ENST00000395946 CFAP74Q9C0B2 1584 aa11.77□□□□□ -0.53
XCR1-202ENST00000395946 ADAMTSL3P82987 1691 aa11.75□□□□□ -0.53
XCR1-202ENST00000395946 ILDR1Q86SU0 546 aaPredicted RBP11.74□□□□□ -0.53
XCR1-202ENST00000395946 PLEKHD1A6NEE1 506 aa11.73□□□□□ -0.53
XCR1-202ENST00000395946 PTPRMP28827 1452 aa11.73□□□□□ -0.53
XCR1-202ENST00000395946 FHOD3Q2V2M9 1422 aa11.73□□□□□ -0.53
XCR1-202ENST00000395946 FRMPD1Q5SYB0 1578 aa11.73□□□□□ -0.53
XCR1-202ENST00000395946 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
XCR1-202ENST00000395946 ARHGEF40Q8TER5 1519 aa11.73□□□□□ -0.53
XCR1-202ENST00000395946 DENND4BO75064 1496 aaPredicted RBP11.72□□□□□ -0.53
XCR1-202ENST00000395946 MAGI2Q86UL8 1455 aa11.72□□□□□ -0.53
XCR1-202ENST00000395946 ZMYM4Q5VZL5 1548 aa11.71□□□□□ -0.53
XCR1-202ENST00000395946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.53
XCR1-202ENST00000395946 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.53
XCR1-202ENST00000395946 FANCAO15360 1455 aa11.7□□□□□ -0.54
XCR1-202ENST00000395946 BCORL1Q5H9F3 1711 aa11.7□□□□□ -0.54
XCR1-202ENST00000395946 POGZQ7Z3K3 1410 aa11.69□□□□□ -0.54
XCR1-202ENST00000395946 AKNAQ7Z591 1439 aa11.69□□□□□ -0.54
XCR1-202ENST00000395946 ARID3CA6NKF2 412 aa11.69□□□□□ -0.54
XCR1-202ENST00000395946 RAPGEF3O95398 923 aa11.69□□□□□ -0.54
XCR1-202ENST00000395946 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
XCR1-202ENST00000395946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.68□□□□□ -0.54
XCR1-202ENST00000395946 RICTORQ6R327 1708 aa11.68□□□□□ -0.54
XCR1-202ENST00000395946 PCF11O94913 1555 aaKnown RBP11.67□□□□□ -0.54
XCR1-202ENST00000395946 ZFYVE16Q7Z3T8 1539 aa11.65□□□□□ -0.54
XCR1-202ENST00000395946 MADDQ8WXG6 1647 aa11.65□□□□□ -0.54
XCR1-202ENST00000395946 HECW1Q76N89 1606 aa11.64□□□□□ -0.55
XCR1-202ENST00000395946 TTC37Q6PGP7 1564 aa11.64□□□□□ -0.55
XCR1-202ENST00000395946 PLCH2O75038 1416 aa11.64□□□□□ -0.55
XCR1-202ENST00000395946 PPP6R1Q9UPN7 881 aa11.64□□□□□ -0.55
XCR1-202ENST00000395946 CDK11AQ9UQ88 783 aaPredicted RBP11.64□□□□□ -0.55
XCR1-202ENST00000395946 LMTK3Q96Q04 1460 aa11.63□□□□□ -0.55
XCR1-202ENST00000395946 ARID4BQ4LE39 1312 aaPredicted RBP11.63□□□□□ -0.55
XCR1-202ENST00000395946 FBXO41Q8TF61 875 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms