RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 HIRIP3Q9BW71 556 aaPredicted RBP23.03■■□□□ 1.28
UBFD1-201ENST00000395878 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
UBFD1-201ENST00000395878 NBR1Q14596 966 aa23.02■■□□□ 1.28
UBFD1-201ENST00000395878 MYH16Q9H6N6 1097 aa22.99■■□□□ 1.27
UBFD1-201ENST00000395878 IRX6P78412 446 aaPredicted RBP22.99■■□□□ 1.27
UBFD1-201ENST00000395878 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
UBFD1-201ENST00000395878 PLEKHD1A6NEE1 506 aa22.94■■□□□ 1.26
UBFD1-201ENST00000395878 WRNQ14191 1432 aaPredicted RBP eCLIP22.92■■□□□ 1.26
UBFD1-201ENST00000395878 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
UBFD1-201ENST00000395878 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.26
UBFD1-201ENST00000395878 DDRGK1Q96HY6 314 aa22.89■■□□□ 1.25
UBFD1-201ENST00000395878 GLIPR1L2Q4G1C9 344 aa22.88■■□□□ 1.25
UBFD1-201ENST00000395878 BECN1Q14457 450 aa22.86■■□□□ 1.25
UBFD1-201ENST00000395878 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
UBFD1-201ENST00000395878 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
UBFD1-201ENST00000395878 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
UBFD1-201ENST00000395878 ARXQ96QS3 562 aa22.83■■□□□ 1.25
UBFD1-201ENST00000395878 KCNH8Q96L42 1107 aa22.82■■□□□ 1.24
UBFD1-201ENST00000395878 CFAP53Q96M91 514 aa22.82■■□□□ 1.24
UBFD1-201ENST00000395878 PPP1R15AO75807 674 aaPredicted RBP22.81■■□□□ 1.24
UBFD1-201ENST00000395878 CFDP1Q9UEE9 299 aaPredicted RBP22.81■■□□□ 1.24
UBFD1-201ENST00000395878 RGL3Q3MIN7 710 aa22.8■■□□□ 1.24
UBFD1-201ENST00000395878 KNSTRNQ9Y448 316 aa22.78■■□□□ 1.24
UBFD1-201ENST00000395878 BAZ1BQ9UIG0 1483 aaKnown RBP22.78■■□□□ 1.24
UBFD1-201ENST00000395878 ANP32EQ9BTT0 268 aa22.77■■□□□ 1.23
UBFD1-201ENST00000395878 CARD11Q9BXL7 1154 aa22.75■■□□□ 1.23
UBFD1-201ENST00000395878 NACADO15069 1562 aa22.71■■□□□ 1.23
UBFD1-201ENST00000395878 GOLGA6L22H0YM25 854 aa22.7■■□□□ 1.22
UBFD1-201ENST00000395878 NCLP19338 710 aaKnown RBP22.7■■□□□ 1.22
UBFD1-201ENST00000395878 SUPT16HQ9Y5B9 1047 aaKnown RBP22.69■■□□□ 1.22
UBFD1-201ENST00000395878 C14orf37Q86TY3 774 aa22.67■■□□□ 1.22
UBFD1-201ENST00000395878 ZBTB7CA1YPR0 619 aa22.65■■□□□ 1.22
UBFD1-201ENST00000395878 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
UBFD1-201ENST00000395878 FTSJ3Q8IY81 847 aaKnown RBP22.62■■□□□ 1.21
UBFD1-201ENST00000395878 TRIM44Q96DX7 344 aaPredicted RBP22.62■■□□□ 1.21
UBFD1-201ENST00000395878 PPP4R2Q9NY27 417 aa22.62■■□□□ 1.21
UBFD1-201ENST00000395878 SIN3AQ96ST3 1273 aa22.61■■□□□ 1.21
UBFD1-201ENST00000395878 PPM1GO15355 546 aaPredicted RBP22.6■■□□□ 1.21
UBFD1-201ENST00000395878 CASC1Q6TDU7 716 aa22.59■■□□□ 1.21
UBFD1-201ENST00000395878 NUDCQ9Y266 331 aa22.59■■□□□ 1.21
UBFD1-201ENST00000395878 MAPK8IP3Q9UPT6 1336 aa22.59■■□□□ 1.21
UBFD1-201ENST00000395878 FHAD1B1AJZ9 1412 aa22.58■■□□□ 1.21
UBFD1-201ENST00000395878 A0A0G2JS52 829 aa22.57■■□□□ 1.2
UBFD1-201ENST00000395878 CCNB3Q8WWL7 1395 aa22.57■■□□□ 1.2
UBFD1-201ENST00000395878 SENP3-EIF4A1A0A087X0R7 540 aa22.56■■□□□ 1.2
UBFD1-201ENST00000395878 TIMELESSQ9UNS1 1208 aa22.55■■□□□ 1.2
UBFD1-201ENST00000395878 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
UBFD1-201ENST00000395878 CDK11BP21127 795 aaKnown RBP22.53■■□□□ 1.2
UBFD1-201ENST00000395878 NEUROD2Q15784 382 aa22.52■■□□□ 1.2
UBFD1-201ENST00000395878 PLEKHG5O94827 1062 aa22.51■■□□□ 1.19
UBFD1-201ENST00000395878 CHMP4BQ9H444 224 aaKnown RBP22.51■■□□□ 1.19
UBFD1-201ENST00000395878 MS4A1P11836 297 aa22.49■■□□□ 1.19
UBFD1-201ENST00000395878 POGKQ9P215 609 aa22.48■■□□□ 1.19
UBFD1-201ENST00000395878 ARID4BQ4LE39 1312 aaPredicted RBP22.46■■□□□ 1.19
UBFD1-201ENST00000395878 LAS1LQ9Y4W2 734 aaKnown RBP22.45■■□□□ 1.19
UBFD1-201ENST00000395878 TMF1P82094 1093 aa22.45■■□□□ 1.18
UBFD1-201ENST00000395878 ZRSR1Q15695 479 aaKnown RBP22.44■■□□□ 1.18
UBFD1-201ENST00000395878 RGS3P49796 1198 aa22.44■■□□□ 1.18
UBFD1-201ENST00000395878 CC2D1BQ5T0F9 858 aaKnown RBP22.44■■□□□ 1.18
UBFD1-201ENST00000395878 FRAT1Q92837 279 aaPredicted RBP22.44■■□□□ 1.18
UBFD1-201ENST00000395878 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
UBFD1-201ENST00000395878 PTMAP06454 111 aaKnown RBP22.43■■□□□ 1.18
UBFD1-201ENST00000395878 PNNQ9H307 717 aaKnown RBP22.42■■□□□ 1.18
UBFD1-201ENST00000395878 CCER2I3L3R5 266 aa22.41■■□□□ 1.18
UBFD1-201ENST00000395878 HAP1P54257 671 aaPredicted RBP22.41■■□□□ 1.18
UBFD1-201ENST00000395878 NOP58Q9Y2X3 529 aaKnown RBP22.4■■□□□ 1.18
UBFD1-201ENST00000395878 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.17
UBFD1-201ENST00000395878 ERICH6BQ5W0A0 696 aa22.38■■□□□ 1.17
UBFD1-201ENST00000395878 CUX2O14529 1486 aa22.37■■□□□ 1.17
UBFD1-201ENST00000395878 TNNT2P45379 298 aaPredicted RBP22.37■■□□□ 1.17
UBFD1-201ENST00000395878 SETD5Q9C0A6 1442 aa22.37■■□□□ 1.17
UBFD1-201ENST00000395878 KANK1Q14678 1352 aa22.37■■□□□ 1.17
UBFD1-201ENST00000395878 U2SURPO15042 1029 aaKnown RBP22.36■■□□□ 1.17
UBFD1-201ENST00000395878 SOGA1O94964 1423 aa22.36■■□□□ 1.17
UBFD1-201ENST00000395878 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
UBFD1-201ENST00000395878 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
UBFD1-201ENST00000395878 B4GALNT3Q6L9W6 998 aa22.34■■□□□ 1.17
UBFD1-201ENST00000395878 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.16
UBFD1-201ENST00000395878 EIF4G1Q04637 1599 aaKnown RBP22.32■■□□□ 1.16
UBFD1-201ENST00000395878 ARHGAP35Q9NRY4 1499 aa22.31■■□□□ 1.16
UBFD1-201ENST00000395878 HSP90AB1P08238 724 aaKnown RBP22.3■■□□□ 1.16
UBFD1-201ENST00000395878 DNTTIP2Q5QJE6 756 aaKnown RBP22.29■■□□□ 1.16
UBFD1-201ENST00000395878 HSPA5P11021 654 aaKnown RBP22.28■■□□□ 1.16
UBFD1-201ENST00000395878 OS9Q13438 667 aaPredicted RBP22.26■■□□□ 1.15
UBFD1-201ENST00000395878 LMOD2Q6P5Q4 547 aa22.25■■□□□ 1.15
UBFD1-201ENST00000395878 MORC1Q86VD1 984 aa22.24■■□□□ 1.15
UBFD1-201ENST00000395878 TPRNQ4KMQ1 711 aa22.23■■□□□ 1.15
UBFD1-201ENST00000395878 HDGFP51858 240 aaKnown RBP22.23■■□□□ 1.15
UBFD1-201ENST00000395878 KTN1Q86UP2 1357 aaKnown RBP22.21■■□□□ 1.15
UBFD1-201ENST00000395878 HSCBQ8IWL3 235 aa22.21■■□□□ 1.15
UBFD1-201ENST00000395878 SRPK2P78362 688 aaKnown RBP22.2■■□□□ 1.14
UBFD1-201ENST00000395878 PKD2Q13563 968 aa22.2■■□□□ 1.14
UBFD1-201ENST00000395878 FGD1P98174 961 aa22.19■■□□□ 1.14
UBFD1-201ENST00000395878 KCNJ4P48050 445 aa22.19■■□□□ 1.14
UBFD1-201ENST00000395878 CFAP44Q96MT7 982 aa22.18■■□□□ 1.14
UBFD1-201ENST00000395878 GOLGA6L6A8MZA4 724 aa22.16■■□□□ 1.14
UBFD1-201ENST00000395878 KANK4Q5T7N3 995 aaPredicted RBP22.16■■□□□ 1.14
UBFD1-201ENST00000395878 NAP1L5Q96NT1 182 aaPredicted RBP22.16■■□□□ 1.14
UBFD1-201ENST00000395878 PLCB2Q00722 1185 aa22.15■■□□□ 1.14
UBFD1-201ENST00000395878 CCDC88BA6NC98 1476 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms