RNA–Protein interactions for RNA: ENST00000395530.6

SPECC1-206, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 8,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-206ENST00000395530 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
SPECC1-206ENST00000395530 RTL5Q5HYW3 569 aaPredicted RBP17.61■□□□□ 0.41
SPECC1-206ENST00000395530 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
SPECC1-206ENST00000395530 GTF3C3Q9Y5Q9 886 aa17.6■□□□□ 0.41
SPECC1-206ENST00000395530 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.41
SPECC1-206ENST00000395530 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
SPECC1-206ENST00000395530 FAM9BQ8IZU0 186 aa17.55■□□□□ 0.4
SPECC1-206ENST00000395530 MYT1Q01538 1121 aa17.54■□□□□ 0.4
SPECC1-206ENST00000395530 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
SPECC1-206ENST00000395530 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
SPECC1-206ENST00000395530 TMC1Q8TDI8 760 aa17.53■□□□□ 0.4
SPECC1-206ENST00000395530 SOGA1O94964 1423 aa17.52■□□□□ 0.39
SPECC1-206ENST00000395530 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
SPECC1-206ENST00000395530 RGL3Q3MIN7 710 aa17.5■□□□□ 0.39
SPECC1-206ENST00000395530 CCNB3Q8WWL7 1395 aa17.5■□□□□ 0.39
SPECC1-206ENST00000395530 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
SPECC1-206ENST00000395530 WDR43Q15061 677 aaKnown RBP eCLIP17.49■□□□□ 0.39
SPECC1-206ENST00000395530 EIF4G2P78344 907 aaKnown RBP eCLIP17.49■□□□□ 0.39
SPECC1-206ENST00000395530 C14orf37Q86TY3 774 aa17.49■□□□□ 0.39
SPECC1-206ENST00000395530 WIZO95785 1651 aa17.49■□□□□ 0.39
SPECC1-206ENST00000395530 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
SPECC1-206ENST00000395530 SALL2Q9Y467 1007 aaPredicted RBP17.48■□□□□ 0.39
SPECC1-206ENST00000395530 HIRIP3Q9BW71 556 aaPredicted RBP17.44■□□□□ 0.38
SPECC1-206ENST00000395530 TRHP20396 242 aaPredicted RBP17.43■□□□□ 0.38
SPECC1-206ENST00000395530 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
SPECC1-206ENST00000395530 CARMIL2Q6F5E8 1435 aa17.42■□□□□ 0.38
SPECC1-206ENST00000395530 MRS2Q9HD23 443 aa17.42■□□□□ 0.38
SPECC1-206ENST00000395530 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
SPECC1-206ENST00000395530 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.38
SPECC1-206ENST00000395530 PLEKHG5O94827 1062 aa17.39■□□□□ 0.37
SPECC1-206ENST00000395530 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
SPECC1-206ENST00000395530 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
SPECC1-206ENST00000395530 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
SPECC1-206ENST00000395530 A0A0G2JS52 829 aa17.34■□□□□ 0.37
SPECC1-206ENST00000395530 KANK1Q14678 1352 aa17.33■□□□□ 0.36
SPECC1-206ENST00000395530 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.36
SPECC1-206ENST00000395530 FKBP8Q14318 412 aa17.33■□□□□ 0.36
SPECC1-206ENST00000395530 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.36
SPECC1-206ENST00000395530 ANP32AP39687 249 aaKnown RBP17.3■□□□□ 0.36
SPECC1-206ENST00000395530 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
SPECC1-206ENST00000395530 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
SPECC1-206ENST00000395530 MLECQ14165 292 aa17.28■□□□□ 0.36
SPECC1-206ENST00000395530 POGKQ9P215 609 aa17.28■□□□□ 0.36
SPECC1-206ENST00000395530 VPS8Q8N3P4 1428 aa17.27■□□□□ 0.36
SPECC1-206ENST00000395530 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.36
SPECC1-206ENST00000395530 FMN1Q68DA7 1419 aa17.27■□□□□ 0.36
SPECC1-206ENST00000395530 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
SPECC1-206ENST00000395530 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
SPECC1-206ENST00000395530 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
SPECC1-206ENST00000395530 UPF2Q9HAU5 1272 aaKnown RBP17.22■□□□□ 0.35
SPECC1-206ENST00000395530 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
SPECC1-206ENST00000395530 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
SPECC1-206ENST00000395530 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.35
SPECC1-206ENST00000395530 MIER1Q8N108 512 aa17.2■□□□□ 0.34
SPECC1-206ENST00000395530 CCDC136Q96JN2 1154 aa17.19■□□□□ 0.34
SPECC1-206ENST00000395530 HDGFP51858 240 aaKnown RBP17.19■□□□□ 0.34
SPECC1-206ENST00000395530 GGT6Q6P531 493 aa17.19■□□□□ 0.34
SPECC1-206ENST00000395530 HSP90AA1P07900 732 aaKnown RBP17.19■□□□□ 0.34
SPECC1-206ENST00000395530 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
SPECC1-206ENST00000395530 DCAF11Q8TEB1 546 aa17.17■□□□□ 0.34
SPECC1-206ENST00000395530 LMOD2Q6P5Q4 547 aa17.17■□□□□ 0.34
SPECC1-206ENST00000395530 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
SPECC1-206ENST00000395530 KANK4Q5T7N3 995 aaPredicted RBP17.15■□□□□ 0.34
SPECC1-206ENST00000395530 SETD5Q9C0A6 1442 aa17.13■□□□□ 0.33
SPECC1-206ENST00000395530 FHOD3Q2V2M9 1422 aa17.12■□□□□ 0.33
SPECC1-206ENST00000395530 JPH4Q96JJ6 628 aa17.11■□□□□ 0.33
SPECC1-206ENST00000395530 PKD2Q13563 968 aa17.09■□□□□ 0.33
SPECC1-206ENST00000395530 TMF1P82094 1093 aa17.08■□□□□ 0.32
SPECC1-206ENST00000395530 NUDCQ9Y266 331 aa17.08■□□□□ 0.32
SPECC1-206ENST00000395530 ANKRD30AQ9BXX3 1397 aa17.08■□□□□ 0.32
SPECC1-206ENST00000395530 MAPK8IP3Q9UPT6 1336 aa17.08■□□□□ 0.32
SPECC1-206ENST00000395530 TNNT2P45379 298 aaPredicted RBP17.06■□□□□ 0.32
SPECC1-206ENST00000395530 CCDC18Q5T9S5 1454 aa17.06■□□□□ 0.32
SPECC1-206ENST00000395530 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
SPECC1-206ENST00000395530 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
SPECC1-206ENST00000395530 NUP155O75694 1391 aa17.04■□□□□ 0.32
SPECC1-206ENST00000395530 CC2D1BQ5T0F9 858 aaKnown RBP17.04■□□□□ 0.32
SPECC1-206ENST00000395530 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
SPECC1-206ENST00000395530 NEUROD2Q15784 382 aa17.02■□□□□ 0.32
SPECC1-206ENST00000395530 TIMELESSQ9UNS1 1208 aa17.02■□□□□ 0.32
SPECC1-206ENST00000395530 SAFB2Q14151 953 aaKnown RBP eCLIP17.02■□□□□ 0.32
SPECC1-206ENST00000395530 FOXD1Q16676 465 aa17.02■□□□□ 0.32
SPECC1-206ENST00000395530 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.31
SPECC1-206ENST00000395530 ARXQ96QS3 562 aa17.02■□□□□ 0.31
SPECC1-206ENST00000395530 KIF3BO15066 747 aa17■□□□□ 0.31
SPECC1-206ENST00000395530 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
SPECC1-206ENST00000395530 SPAG9O60271 1321 aaKnown RBP17■□□□□ 0.31
SPECC1-206ENST00000395530 STK26Q9P289 416 aa16.99■□□□□ 0.31
SPECC1-206ENST00000395530 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
SPECC1-206ENST00000395530 RSPH4AQ5TD94 716 aa16.98■□□□□ 0.31
SPECC1-206ENST00000395530 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
SPECC1-206ENST00000395530 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
SPECC1-206ENST00000395530 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
SPECC1-206ENST00000395530 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
SPECC1-206ENST00000395530 PTPRGP23470 1445 aa16.97■□□□□ 0.31
SPECC1-206ENST00000395530 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.31
SPECC1-206ENST00000395530 NCAPD3P42695 1498 aa16.96■□□□□ 0.31
SPECC1-206ENST00000395530 FTSJ3Q8IY81 847 aaKnown RBP16.95■□□□□ 0.3
SPECC1-206ENST00000395530 PNNQ9H307 717 aaKnown RBP16.94■□□□□ 0.3
SPECC1-206ENST00000395530 SOX12O15370 315 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms