RNA–Protein interactions for RNA: ENST00000395290.6

CELF1-204, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CELF1, Length 7,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-204ENST00000395290 LAS1LQ9Y4W2 734 aaKnown RBP15.54■□□□□ 0.08
CELF1-204ENST00000395290 NOP58Q9Y2X3 529 aaKnown RBP15.53■□□□□ 0.08
CELF1-204ENST00000395290 CALRP27797 417 aaKnown RBP15.51■□□□□ 0.07
CELF1-204ENST00000395290 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
CELF1-204ENST00000395290 MRS2Q9HD23 443 aa15.49■□□□□ 0.07
CELF1-204ENST00000395290 DRC7Q8IY82 874 aa15.47■□□□□ 0.07
CELF1-204ENST00000395290 HSP90AB1P08238 724 aaKnown RBP15.47■□□□□ 0.07
CELF1-204ENST00000395290 DEKP35659 375 aaKnown RBP15.45■□□□□ 0.06
CELF1-204ENST00000395290 STAG3Q9UJ98 1225 aa15.44■□□□□ 0.06
CELF1-204ENST00000395290 NOC3LQ8WTT2 800 aaKnown RBP15.42■□□□□ 0.06
CELF1-204ENST00000395290 ARID3AQ99856 593 aa15.41■□□□□ 0.06
CELF1-204ENST00000395290 CHGAP10645 457 aaKnown RBP15.41■□□□□ 0.06
CELF1-204ENST00000395290 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
CELF1-204ENST00000395290 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
CELF1-204ENST00000395290 ESF1Q9H501 851 aaKnown RBP15.4■□□□□ 0.06
CELF1-204ENST00000395290 PNNQ9H307 717 aaKnown RBP15.39■□□□□ 0.05
CELF1-204ENST00000395290 KIAA2012Q0VF49 1180 aa15.39■□□□□ 0.05
CELF1-204ENST00000395290 SETQ01105 290 aaPredicted RBP15.39■□□□□ 0.05
CELF1-204ENST00000395290 GOLGA6L1Q8N7Z2 621 aa15.39■□□□□ 0.05
CELF1-204ENST00000395290 GOLGA6L4A6NEF3 574 aa15.38■□□□□ 0.05
CELF1-204ENST00000395290 ZNF777Q9ULD5 760 aaPredicted RBP15.37■□□□□ 0.05
CELF1-204ENST00000395290 TAOK2Q9UL54 1235 aa15.36■□□□□ 0.05
CELF1-204ENST00000395290 FTSJ3Q8IY81 847 aaKnown RBP15.35■□□□□ 0.05
CELF1-204ENST00000395290 A0A0G2JS52 829 aa15.33■□□□□ 0.05
CELF1-204ENST00000395290 CLSTN1O94985 981 aa15.33■□□□□ 0.04
CELF1-204ENST00000395290 FGD1P98174 961 aa15.32■□□□□ 0.04
CELF1-204ENST00000395290 HSCBQ8IWL3 235 aa15.32■□□□□ 0.04
CELF1-204ENST00000395290 ZBTB7CA1YPR0 619 aa15.32■□□□□ 0.04
CELF1-204ENST00000395290 A0A0U1RQG5 324 aaPredicted RBP15.31■□□□□ 0.04
CELF1-204ENST00000395290 MIER1Q8N108 512 aa15.31■□□□□ 0.04
CELF1-204ENST00000395290 USP35Q9P2H5 1018 aa15.3■□□□□ 0.04
CELF1-204ENST00000395290 NAP1L2Q9ULW6 460 aaPredicted RBP15.29■□□□□ 0.04
CELF1-204ENST00000395290 PTMSP20962 102 aa15.29■□□□□ 0.04
CELF1-204ENST00000395290 ARID3CA6NKF2 412 aa15.26■□□□□ 0.03
CELF1-204ENST00000395290 FBLN2P98095 1184 aa15.26■□□□□ 0.03
CELF1-204ENST00000395290 SUPT16HQ9Y5B9 1047 aaKnown RBP15.26■□□□□ 0.03
CELF1-204ENST00000395290 KCNJ4P48050 445 aa15.25■□□□□ 0.03
CELF1-204ENST00000395290 PPP4R2Q9NY27 417 aa15.25■□□□□ 0.03
CELF1-204ENST00000395290 RGS3P49796 1198 aa15.25■□□□□ 0.03
CELF1-204ENST00000395290 HSP90AA2PQ14568 343 aaPredicted RBP15.24■□□□□ 0.03
CELF1-204ENST00000395290 PRM3Q9NNZ6 103 aa15.23■□□□□ 0.03
CELF1-204ENST00000395290 P3H3Q8IVL6 736 aa15.23■□□□□ 0.03
CELF1-204ENST00000395290 MCCP23508 829 aa15.2■□□□□ 0.02
CELF1-204ENST00000395290 CHMP4BQ9H444 224 aaKnown RBP15.2■□□□□ 0.02
CELF1-204ENST00000395290 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
CELF1-204ENST00000395290 SPRYD3Q8NCJ5 442 aa15.18■□□□□ 0.02
CELF1-204ENST00000395290 KDM2AQ9Y2K7 1162 aa15.18■□□□□ 0.02
CELF1-204ENST00000395290 GBP4Q96PP9 640 aa15.18■□□□□ 0.02
CELF1-204ENST00000395290 TPM4P67936 248 aa15.17■□□□□ 0.02
CELF1-204ENST00000395290 OS9Q13438 667 aaPredicted RBP15.17■□□□□ 0.02
CELF1-204ENST00000395290 GNL2Q13823 731 aaKnown RBP15.16■□□□□ 0.02
CELF1-204ENST00000395290 CFAP53Q96M91 514 aa15.16■□□□□ 0.02
CELF1-204ENST00000395290 SYAP1Q96A49 352 aaPredicted RBP15.15■□□□□ 0.02
CELF1-204ENST00000395290 VSIG10Q8N0Z9 540 aa15.14■□□□□ 0.01
CELF1-204ENST00000395290 EIF4G2P78344 907 aaKnown RBP eCLIP15.14■□□□□ 0.01
CELF1-204ENST00000395290 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
CELF1-204ENST00000395290 CFAP44Q96MT7 982 aa15.14■□□□□ 0.01
CELF1-204ENST00000395290 MS4A1P11836 297 aa15.13■□□□□ 0.01
CELF1-204ENST00000395290 C14orf37Q86TY3 774 aa15.12■□□□□ 0.01
CELF1-204ENST00000395290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.12■□□□□ 0.017e-7■■□□□ 14.2
CELF1-204ENST00000395290 GZF1Q9H116 711 aaPredicted RBP15.12■□□□□ 0.01
CELF1-204ENST00000395290 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
CELF1-204ENST00000395290 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
CELF1-204ENST00000395290 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
CELF1-204ENST00000395290 ZNF771Q7L3S4 317 aaPredicted RBP15.1■□□□□ 0.01
CELF1-204ENST00000395290 FRAT1Q92837 279 aaPredicted RBP15.09■□□□□ 0.01
CELF1-204ENST00000395290 HTATSF1O43719 755 aaKnown RBP15.09■□□□□ 0.01
CELF1-204ENST00000395290 PATL2C9JE40 543 aaKnown RBP15.09■□□□□ 0.01
CELF1-204ENST00000395290 APPP05067 770 aa15.06■□□□□ 0
CELF1-204ENST00000395290 B4GALNT3Q6L9W6 998 aa15.06■□□□□ 0
CELF1-204ENST00000395290 MAPK8IP3Q9UPT6 1336 aa15.06■□□□□ 0
CELF1-204ENST00000395290 PDE4CQ08493 712 aa15.06■□□□□ 0
CELF1-204ENST00000395290 NPHP1O15259 732 aa15.05■□□□□ 0
CELF1-204ENST00000395290 PLEKHG5O94827 1062 aa15.05■□□□□ 0
CELF1-204ENST00000395290 DCAF1Q9Y4B6 1507 aa15.05■□□□□ 0
CELF1-204ENST00000395290 GPS2Q13227 327 aa15.04■□□□□ -0
CELF1-204ENST00000395290 RBM19Q9Y4C8 960 aaKnown RBP15.04■□□□□ -0
CELF1-204ENST00000395290 KNSTRNQ9Y448 316 aa15.03■□□□□ -0
CELF1-204ENST00000395290 SENP3-EIF4A1A0A087X0R7 540 aa15.03■□□□□ -0
CELF1-204ENST00000395290 RRP12Q5JTH9 1297 aaKnown RBP15.03■□□□□ -0
CELF1-204ENST00000395290 TPM3P06753 285 aa15.02■□□□□ -0
CELF1-204ENST00000395290 CHIC2Q9UKJ5 165 aa15.01□□□□□ -0.01
CELF1-204ENST00000395290 CEP89Q96ST8 783 aa15.01□□□□□ -0.01
CELF1-204ENST00000395290 CSPP1Q1MSJ5 1256 aa15□□□□□ -0.01
CELF1-204ENST00000395290 NEUROD2Q15784 382 aa15□□□□□ -0.01
CELF1-204ENST00000395290 PHF14O94880 888 aa15□□□□□ -0.01
CELF1-204ENST00000395290 ISY1Q9ULR0 285 aaKnown RBP14.99□□□□□ -0.01
CELF1-204ENST00000395290 CCDC34Q96HJ3 373 aa14.99□□□□□ -0.01
CELF1-204ENST00000395290 CDCA8Q53HL2 280 aa14.99□□□□□ -0.01
CELF1-204ENST00000395290 KIAA1211Q6ZU35 1233 aa14.99□□□□□ -0.01
CELF1-204ENST00000395290 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
CELF1-204ENST00000395290 TEX35Q5T0J7 233 aa14.99□□□□□ -0.01
CELF1-204ENST00000395290 NOM1Q5C9Z4 860 aaKnown RBP14.98□□□□□ -0.01
CELF1-204ENST00000395290 NUDCQ9Y266 331 aa14.97□□□□□ -0.01
CELF1-204ENST00000395290 CCDC70Q6NSX1 233 aa14.96□□□□□ -0.01
CELF1-204ENST00000395290 HAP1P54257 671 aaPredicted RBP14.96□□□□□ -0.01
CELF1-204ENST00000395290 CALD1Q05682 793 aaKnown RBP14.96□□□□□ -0.02
CELF1-204ENST00000395290 TAF7LQ5H9L4 462 aa14.96□□□□□ -0.02
CELF1-204ENST00000395290 HSP90B1P14625 803 aaKnown RBP14.95□□□□□ -0.02
CELF1-204ENST00000395290 SLKQ9H2G2 1235 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms