RNA–Protein interactions for RNA: ENST00000395146.8

AFF1-202, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AFF1, Length 9,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-202ENST00000395146 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
AFF1-202ENST00000395146 CHGAP10645 457 aaKnown RBP14.28□□□□□ -0.12
AFF1-202ENST00000395146 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
AFF1-202ENST00000395146 HIRIP3Q9BW71 556 aaPredicted RBP14.26□□□□□ -0.13
AFF1-202ENST00000395146 BECN1Q14457 450 aa14.25□□□□□ -0.13
AFF1-202ENST00000395146 KDM2AQ9Y2K7 1162 aa14.24□□□□□ -0.13
AFF1-202ENST00000395146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.136e-7■■□□□ 12.4
AFF1-202ENST00000395146 ESF1Q9H501 851 aaKnown RBP14.24□□□□□ -0.13
AFF1-202ENST00000395146 STAG3Q9UJ98 1225 aa14.24□□□□□ -0.13
AFF1-202ENST00000395146 RRP7BPQ9NSQ0 103 aa14.22□□□□□ -0.13
AFF1-202ENST00000395146 KIF27Q86VH2 1401 aa14.21□□□□□ -0.13
AFF1-202ENST00000395146 MYH16Q9H6N6 1097 aa14.21□□□□□ -0.13
AFF1-202ENST00000395146 NACADO15069 1562 aa14.2□□□□□ -0.14
AFF1-202ENST00000395146 PPP4R2Q9NY27 417 aa14.17□□□□□ -0.14
AFF1-202ENST00000395146 PPM1GO15355 546 aaPredicted RBP14.16□□□□□ -0.14
AFF1-202ENST00000395146 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
AFF1-202ENST00000395146 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
AFF1-202ENST00000395146 ARXQ96QS3 562 aa14.15□□□□□ -0.14
AFF1-202ENST00000395146 BAZ1BQ9UIG0 1483 aaKnown RBP14.15□□□□□ -0.14
AFF1-202ENST00000395146 CDCA8Q53HL2 280 aa14.14□□□□□ -0.15
AFF1-202ENST00000395146 TIMELESSQ9UNS1 1208 aa14.13□□□□□ -0.15
AFF1-202ENST00000395146 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
AFF1-202ENST00000395146 GOLGA6L22H0YM25 854 aa14.12□□□□□ -0.15
AFF1-202ENST00000395146 CHMP7Q8WUX9 453 aaPredicted RBP14.11□□□□□ -0.15
AFF1-202ENST00000395146 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
AFF1-202ENST00000395146 TRIM44Q96DX7 344 aaPredicted RBP14.1□□□□□ -0.15
AFF1-202ENST00000395146 KNSTRNQ9Y448 316 aa14.09□□□□□ -0.15
AFF1-202ENST00000395146 FHAD1B1AJZ9 1412 aa14.09□□□□□ -0.15
AFF1-202ENST00000395146 NOP58Q9Y2X3 529 aaKnown RBP14.09□□□□□ -0.15
AFF1-202ENST00000395146 CFAP53Q96M91 514 aa14.08□□□□□ -0.16
AFF1-202ENST00000395146 CCER2I3L3R5 266 aa14.08□□□□□ -0.16
AFF1-202ENST00000395146 PLEKHD1A6NEE1 506 aa14.08□□□□□ -0.16
AFF1-202ENST00000395146 CARD11Q9BXL7 1154 aa14.08□□□□□ -0.16
AFF1-202ENST00000395146 NCLP19338 710 aaKnown RBP14.06□□□□□ -0.16
AFF1-202ENST00000395146 CFDP1Q9UEE9 299 aaPredicted RBP14.05□□□□□ -0.16
AFF1-202ENST00000395146 ERICH6BQ5W0A0 696 aa14.04□□□□□ -0.16
AFF1-202ENST00000395146 SIN3AQ96ST3 1273 aa14.04□□□□□ -0.16
AFF1-202ENST00000395146 VPS8Q8N3P4 1428 aa14.03□□□□□ -0.16
AFF1-202ENST00000395146 CASC1Q6TDU7 716 aa14.01□□□□□ -0.17
AFF1-202ENST00000395146 FTSJ3Q8IY81 847 aaKnown RBP14□□□□□ -0.17
AFF1-202ENST00000395146 SETD5Q9C0A6 1442 aa13.99□□□□□ -0.17
AFF1-202ENST00000395146 RGL3Q3MIN7 710 aa13.99□□□□□ -0.17
AFF1-202ENST00000395146 SOGA1O94964 1423 aa13.98□□□□□ -0.17
AFF1-202ENST00000395146 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
AFF1-202ENST00000395146 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
AFF1-202ENST00000395146 MS4A1P11836 297 aa13.96□□□□□ -0.18
AFF1-202ENST00000395146 ARHGAP35Q9NRY4 1499 aa13.95□□□□□ -0.18
AFF1-202ENST00000395146 B4GALNT3Q6L9W6 998 aa13.94□□□□□ -0.18
AFF1-202ENST00000395146 MAPK8IP3Q9UPT6 1336 aa13.94□□□□□ -0.18
AFF1-202ENST00000395146 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
AFF1-202ENST00000395146 RGS3P49796 1198 aa13.93□□□□□ -0.18
AFF1-202ENST00000395146 NUDCQ9Y266 331 aa13.93□□□□□ -0.18
AFF1-202ENST00000395146 PTMAP06454 111 aaKnown RBP13.93□□□□□ -0.18
AFF1-202ENST00000395146 RBM19Q9Y4C8 960 aaKnown RBP13.93□□□□□ -0.18
AFF1-202ENST00000395146 PPP1R15AO75807 674 aaPredicted RBP13.92□□□□□ -0.18
AFF1-202ENST00000395146 KCNH8Q96L42 1107 aa13.91□□□□□ -0.18
AFF1-202ENST00000395146 CARMIL1Q5VZK9 1371 aa13.91□□□□□ -0.18
AFF1-202ENST00000395146 SENP3-EIF4A1A0A087X0R7 540 aa13.91□□□□□ -0.18
AFF1-202ENST00000395146 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
AFF1-202ENST00000395146 TMF1P82094 1093 aa13.89□□□□□ -0.19
AFF1-202ENST00000395146 CUX2O14529 1486 aa13.88□□□□□ -0.19
AFF1-202ENST00000395146 FRAT1Q92837 279 aaPredicted RBP13.87□□□□□ -0.19
AFF1-202ENST00000395146 CC2D1BQ5T0F9 858 aaKnown RBP13.87□□□□□ -0.19
AFF1-202ENST00000395146 HSPA5P11021 654 aaKnown RBP13.87□□□□□ -0.19
AFF1-202ENST00000395146 NAP1L5Q96NT1 182 aaPredicted RBP13.87□□□□□ -0.19
AFF1-202ENST00000395146 ZRSR1Q15695 479 aaKnown RBP13.86□□□□□ -0.19
AFF1-202ENST00000395146 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
AFF1-202ENST00000395146 DEKP35659 375 aaKnown RBP13.85□□□□□ -0.19
AFF1-202ENST00000395146 L1TD1Q5T7N2 865 aaKnown RBP13.85□□□□□ -0.19
AFF1-202ENST00000395146 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
AFF1-202ENST00000395146 PNNQ9H307 717 aaKnown RBP13.85□□□□□ -0.19
AFF1-202ENST00000395146 KTN1Q86UP2 1357 aaKnown RBP13.84□□□□□ -0.19
AFF1-202ENST00000395146 HSP90AB1P08238 724 aaKnown RBP13.84□□□□□ -0.19
AFF1-202ENST00000395146 DNTTIP2Q5QJE6 756 aaKnown RBP13.84□□□□□ -0.19
AFF1-202ENST00000395146 RAB3GAP2Q9H2M9 1393 aa13.84□□□□□ -0.19
AFF1-202ENST00000395146 CCDC88BA6NC98 1476 aa13.84□□□□□ -0.19
AFF1-202ENST00000395146 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
AFF1-202ENST00000395146 HSCBQ8IWL3 235 aa13.83□□□□□ -0.2
AFF1-202ENST00000395146 DCAF11Q8TEB1 546 aa13.83□□□□□ -0.2
AFF1-202ENST00000395146 CDK11BP21127 795 aaKnown RBP13.83□□□□□ -0.2
AFF1-202ENST00000395146 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
AFF1-202ENST00000395146 MROH2BQ7Z745 1585 aa13.82□□□□□ -0.2
AFF1-202ENST00000395146 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
AFF1-202ENST00000395146 RALBP1Q15311 655 aa13.8□□□□□ -0.2
AFF1-202ENST00000395146 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
AFF1-202ENST00000395146 CFAP44Q96MT7 982 aa13.8□□□□□ -0.2
AFF1-202ENST00000395146 KANK1Q14678 1352 aa13.8□□□□□ -0.2
AFF1-202ENST00000395146 TCERG1O14776 1098 aaKnown RBP13.79□□□□□ -0.2
AFF1-202ENST00000395146 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
AFF1-202ENST00000395146 C14orf37Q86TY3 774 aa13.79□□□□□ -0.2
AFF1-202ENST00000395146 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
AFF1-202ENST00000395146 POGKQ9P215 609 aa13.78□□□□□ -0.2
AFF1-202ENST00000395146 GOLGA6L6A8MZA4 724 aa13.77□□□□□ -0.21
AFF1-202ENST00000395146 ZBTB7CA1YPR0 619 aa13.76□□□□□ -0.21
AFF1-202ENST00000395146 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
AFF1-202ENST00000395146 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
AFF1-202ENST00000395146 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
AFF1-202ENST00000395146 ARID4BQ4LE39 1312 aaPredicted RBP13.75□□□□□ -0.21
AFF1-202ENST00000395146 U2SURPO15042 1029 aaKnown RBP13.75□□□□□ -0.21
AFF1-202ENST00000395146 PTMSP20962 102 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms