RNA–Protein interactions for RNA: ENST00000394686.3

SGMS2-203, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 2,127 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-203ENST00000394686 RANGAP1P46060 587 aaPredicted RBP10.43□□□□□ -0.74
SGMS2-203ENST00000394686 CACNB1Q02641 598 aaPredicted RBP10.43□□□□□ -0.74
SGMS2-203ENST00000394686 NKX1-1Q15270 411 aaPredicted RBP10.42□□□□□ -0.74
SGMS2-203ENST00000394686 TRIM26Q12899 539 aaPredicted RBP10.4□□□□□ -0.74
SGMS2-203ENST00000394686 CIZ1Q9ULV3 898 aaPredicted RBP10.4□□□□□ -0.74
SGMS2-203ENST00000394686 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.74
SGMS2-203ENST00000394686 ZCCHC6Q5VYS8 1495 aaKnown RBP10.39□□□□□ -0.75
SGMS2-203ENST00000394686 RNF25Q96BH1 459 aaPredicted RBP10.36□□□□□ -0.75
SGMS2-203ENST00000394686 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
SGMS2-203ENST00000394686 UNC13AQ9UPW8 1703 aa10.35□□□□□ -0.75
SGMS2-203ENST00000394686 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
SGMS2-203ENST00000394686 GTPBP6O43824 516 aaPredicted RBP10.32□□□□□ -0.76
SGMS2-203ENST00000394686 POLA2Q14181 598 aa10.29□□□□□ -0.76
SGMS2-203ENST00000394686 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
SGMS2-203ENST00000394686 NPM2Q86SE8 214 aaKnown RBP10.26□□□□□ -0.77
SGMS2-203ENST00000394686 MIER1Q8N108 512 aa10.25□□□□□ -0.77
SGMS2-203ENST00000394686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
SGMS2-203ENST00000394686 NEUROD2Q15784 382 aa10.22□□□□□ -0.77
SGMS2-203ENST00000394686 ACIN1Q9UKV3 1341 aaKnown RBP10.21□□□□□ -0.78
SGMS2-203ENST00000394686 SPINK5Q9NQ38 1064 aaPredicted RBP10.2□□□□□ -0.78
SGMS2-203ENST00000394686 SHROOM4Q9ULL8 1493 aa10.2□□□□□ -0.78
SGMS2-203ENST00000394686 KCNV2Q8TDN2 545 aa10.18□□□□□ -0.78
SGMS2-203ENST00000394686 ARID3AQ99856 593 aa10.16□□□□□ -0.78
SGMS2-203ENST00000394686 SLC24A3Q9HC58 644 aa10.15□□□□□ -0.78
SGMS2-203ENST00000394686 BICRAQ9NZM4 1560 aa10.15□□□□□ -0.79
SGMS2-203ENST00000394686 CENPBP07199 599 aaPredicted RBP10.12□□□□□ -0.79
SGMS2-203ENST00000394686 SCRIBQ14160 1630 aa10.12□□□□□ -0.79
SGMS2-203ENST00000394686 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
SGMS2-203ENST00000394686 TRIM41Q8WV44 630 aa10.11□□□□□ -0.79
SGMS2-203ENST00000394686 STK25O00506 426 aa10.1□□□□□ -0.79
SGMS2-203ENST00000394686 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
SGMS2-203ENST00000394686 CADPS2Q86UW7 1296 aa10.08□□□□□ -0.8
SGMS2-203ENST00000394686 C1orf115Q9H7X2 142 aa10.07□□□□□ -0.8
SGMS2-203ENST00000394686 ZNF692Q9BU19 519 aaPredicted RBP10.06□□□□□ -0.8
SGMS2-203ENST00000394686 APLP2Q06481 763 aa10.06□□□□□ -0.8
SGMS2-203ENST00000394686 NEUROD1Q13562 356 aa10.04□□□□□ -0.8
SGMS2-203ENST00000394686 P3H3Q8IVL6 736 aa10.04□□□□□ -0.8
SGMS2-203ENST00000394686 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
SGMS2-203ENST00000394686 PABPN1Q86U42 306 aaKnown RBP eCLIP10.02□□□□□ -0.81
SGMS2-203ENST00000394686 ABCB7O75027 752 aa10.01□□□□□ -0.81
SGMS2-203ENST00000394686 ARID3CA6NKF2 412 aa10□□□□□ -0.81
SGMS2-203ENST00000394686 ZMYND15Q9H091 742 aa10□□□□□ -0.81
SGMS2-203ENST00000394686 GPBP1L1Q9HC44 474 aaPredicted RBP9.99□□□□□ -0.81
SGMS2-203ENST00000394686 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
SGMS2-203ENST00000394686 STK24Q9Y6E0 443 aa9.97□□□□□ -0.81
SGMS2-203ENST00000394686 SEMA3EO15041 775 aa9.95□□□□□ -0.82
SGMS2-203ENST00000394686 CAPN15O75808 1086 aa9.95□□□□□ -0.82
SGMS2-203ENST00000394686 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
SGMS2-203ENST00000394686 RSPH6AQ9H0K4 717 aa9.95□□□□□ -0.82
SGMS2-203ENST00000394686 IL27Q8NEV9 243 aa9.94□□□□□ -0.82
SGMS2-203ENST00000394686 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
SGMS2-203ENST00000394686 ZFP91Q96JP5 570 aaPredicted RBP9.92□□□□□ -0.82
SGMS2-203ENST00000394686 EIF4G1Q04637 1599 aaKnown RBP9.92□□□□□ -0.82
SGMS2-203ENST00000394686 SSUH2Q9Y2M2 353 aa9.92□□□□□ -0.82
SGMS2-203ENST00000394686 NECTIN2Q92692 538 aa9.91□□□□□ -0.82
SGMS2-203ENST00000394686 WDR70Q9NW82 654 aa9.91□□□□□ -0.82
SGMS2-203ENST00000394686 NUBP1P53384 320 aa9.89□□□□□ -0.83
SGMS2-203ENST00000394686 LOC105371045A0A1W2PR82 267 aa9.89□□□□□ -0.83
SGMS2-203ENST00000394686 DCAF8Q5TAQ9 597 aa9.89□□□□□ -0.83
SGMS2-203ENST00000394686 ZBTB47Q9UFB7 747 aaPredicted RBP9.89□□□□□ -0.83
SGMS2-203ENST00000394686 CC2D2AQ9P2K1 1620 aa9.88□□□□□ -0.83
SGMS2-203ENST00000394686 VGFO15240 615 aaPredicted RBP9.87□□□□□ -0.83
SGMS2-203ENST00000394686 ZMYND10O75800 440 aa9.86□□□□□ -0.83
SGMS2-203ENST00000394686 GSE1Q14687 1217 aa9.86□□□□□ -0.83
SGMS2-203ENST00000394686 CLSPNQ9HAW4 1339 aa9.86□□□□□ -0.83
SGMS2-203ENST00000394686 PLEKHG5O94827 1062 aa9.86□□□□□ -0.83
SGMS2-203ENST00000394686 DIEXFQ68CQ4 756 aaKnown RBP9.86□□□□□ -0.83
SGMS2-203ENST00000394686 BCL11AQ9H165 835 aa9.86□□□□□ -0.83
SGMS2-203ENST00000394686 APBB1O00213 710 aa9.84□□□□□ -0.83
SGMS2-203ENST00000394686 MKRN3Q13064 507 aaKnown RBP9.83□□□□□ -0.84
SGMS2-203ENST00000394686 POTEHQ6S545 545 aa9.82□□□□□ -0.84
SGMS2-203ENST00000394686 TESPA1A2RU30 521 aaPredicted RBP9.82□□□□□ -0.84
SGMS2-203ENST00000394686 ZBTB12Q9Y330 459 aaPredicted RBP9.82□□□□□ -0.84
SGMS2-203ENST00000394686 ANP32EQ9BTT0 268 aa9.79□□□□□ -0.84
SGMS2-203ENST00000394686 CECR2Q9BXF3 1484 aa9.78□□□□□ -0.84
SGMS2-203ENST00000394686 SPDYE2BA6NHP3 402 aa9.78□□□□□ -0.84
SGMS2-203ENST00000394686 SPDYE6P0CI01 402 aa9.78□□□□□ -0.84
SGMS2-203ENST00000394686 SPDYE2Q495Y8 402 aa9.78□□□□□ -0.84
SGMS2-203ENST00000394686 KDM4CQ9H3R0 1056 aa9.77□□□□□ -0.85
SGMS2-203ENST00000394686 CCDC9Q9Y3X0 531 aaKnown RBP9.77□□□□□ -0.85
SGMS2-203ENST00000394686 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
SGMS2-203ENST00000394686 PDIA4P13667 645 aaKnown RBP9.76□□□□□ -0.85
SGMS2-203ENST00000394686 PYGBP11216 843 aa9.75□□□□□ -0.85
SGMS2-203ENST00000394686 RYDENQ9NUL5 291 aaKnown RBP9.75□□□□□ -0.85
SGMS2-203ENST00000394686 ZBTB7CA1YPR0 619 aa9.74□□□□□ -0.85
SGMS2-203ENST00000394686 BARGINQ6ZT62 677 aa9.73□□□□□ -0.85
SGMS2-203ENST00000394686 SMARCA4P51532 1647 aa9.72□□□□□ -0.85
SGMS2-203ENST00000394686 BAZ1AQ9NRL2 1556 aaPredicted RBP9.72□□□□□ -0.85
SGMS2-203ENST00000394686 E2F4Q16254 413 aa9.71□□□□□ -0.86
SGMS2-203ENST00000394686 FAM9AQ8IZU1 332 aaPredicted RBP9.71□□□□□ -0.86
SGMS2-203ENST00000394686 RASEFQ8IZ41 740 aa9.7□□□□□ -0.86
SGMS2-203ENST00000394686 CCDC82Q8N4S0 544 aa9.7□□□□□ -0.86
SGMS2-203ENST00000394686 SMARCA2P51531 1590 aa9.69□□□□□ -0.86
SGMS2-203ENST00000394686 CCER1Q8TC90 406 aaPredicted RBP9.69□□□□□ -0.86
SGMS2-203ENST00000394686 PPP1R37O75864 691 aa9.68□□□□□ -0.86
SGMS2-203ENST00000394686 SGIP1Q9BQI5 828 aa9.68□□□□□ -0.86
SGMS2-203ENST00000394686 RBM26Q5T8P6 1007 aaKnown RBP9.68□□□□□ -0.86
SGMS2-203ENST00000394686 FAM117AQ9C073 453 aa9.68□□□□□ -0.86
SGMS2-203ENST00000394686 ZNF316A6NFI3 1004 aaPredicted RBP9.67□□□□□ -0.86
SGMS2-203ENST00000394686 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms