RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
PPARGC1B-203ENST00000394320 PDS5BQ9NTI5 1447 aa19.46■□□□□ 0.71
PPARGC1B-203ENST00000394320 HNRNPUQ00839 825 aaKnown RBP eCLIP19.46■□□□□ 0.71
PPARGC1B-203ENST00000394320 KDM2AQ9Y2K7 1162 aa19.45■□□□□ 0.7
PPARGC1B-203ENST00000394320 CCDC88BA6NC98 1476 aa19.43■□□□□ 0.7
PPARGC1B-203ENST00000394320 WDR43Q15061 677 aaKnown RBP eCLIP19.41■□□□□ 0.7
PPARGC1B-203ENST00000394320 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.41■□□□□ 0.7
PPARGC1B-203ENST00000394320 FAM9BQ8IZU0 186 aa19.4■□□□□ 0.7
PPARGC1B-203ENST00000394320 ANP32AP39687 249 aaKnown RBP19.39■□□□□ 0.69
PPARGC1B-203ENST00000394320 CDCA8Q53HL2 280 aa19.39■□□□□ 0.69
PPARGC1B-203ENST00000394320 MRS2Q9HD23 443 aa19.36■□□□□ 0.69
PPARGC1B-203ENST00000394320 CCNB3Q8WWL7 1395 aa19.35■□□□□ 0.69
PPARGC1B-203ENST00000394320 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
PPARGC1B-203ENST00000394320 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
PPARGC1B-203ENST00000394320 PPP1R15AO75807 674 aaPredicted RBP19.34■□□□□ 0.69
PPARGC1B-203ENST00000394320 SOGA1O94964 1423 aa19.31■□□□□ 0.68
PPARGC1B-203ENST00000394320 CARMIL2Q6F5E8 1435 aa19.29■□□□□ 0.68
PPARGC1B-203ENST00000394320 FKBP8Q14318 412 aa19.29■□□□□ 0.68
PPARGC1B-203ENST00000394320 UPF2Q9HAU5 1272 aaKnown RBP19.27■□□□□ 0.68
PPARGC1B-203ENST00000394320 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
PPARGC1B-203ENST00000394320 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
PPARGC1B-203ENST00000394320 TIMELESSQ9UNS1 1208 aa19.26■□□□□ 0.67
PPARGC1B-203ENST00000394320 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
PPARGC1B-203ENST00000394320 BCL11AQ9H165 835 aa19.24■□□□□ 0.67
PPARGC1B-203ENST00000394320 RGL3Q3MIN7 710 aa19.21■□□□□ 0.67
PPARGC1B-203ENST00000394320 FMN1Q68DA7 1419 aa19.21■□□□□ 0.67
PPARGC1B-203ENST00000394320 CFAP53Q96M91 514 aa19.2■□□□□ 0.66
PPARGC1B-203ENST00000394320 KANK1Q14678 1352 aa19.19■□□□□ 0.66
PPARGC1B-203ENST00000394320 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
PPARGC1B-203ENST00000394320 CARD11Q9BXL7 1154 aa19.18■□□□□ 0.66
PPARGC1B-203ENST00000394320 CCDC136Q96JN2 1154 aa19.18■□□□□ 0.66
PPARGC1B-203ENST00000394320 ATAD2BQ9ULI0 1458 aa19.17■□□□□ 0.66
PPARGC1B-203ENST00000394320 SALL2Q9Y467 1007 aaPredicted RBP19.17■□□□□ 0.66
PPARGC1B-203ENST00000394320 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
PPARGC1B-203ENST00000394320 ABCC8Q09428 1581 aa19.15■□□□□ 0.66
PPARGC1B-203ENST00000394320 KNSTRNQ9Y448 316 aa19.15■□□□□ 0.66
PPARGC1B-203ENST00000394320 MIER1Q8N108 512 aa19.14■□□□□ 0.65
PPARGC1B-203ENST00000394320 WIZO95785 1651 aa19.13■□□□□ 0.65
PPARGC1B-203ENST00000394320 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
PPARGC1B-203ENST00000394320 TDRD9Q8NDG6 1382 aaKnown RBP19.11■□□□□ 0.65
PPARGC1B-203ENST00000394320 HSP90AA1P07900 732 aaKnown RBP19.1■□□□□ 0.65
PPARGC1B-203ENST00000394320 HIRIP3Q9BW71 556 aaPredicted RBP19.1■□□□□ 0.65
PPARGC1B-203ENST00000394320 C14orf37Q86TY3 774 aa19.09■□□□□ 0.65
PPARGC1B-203ENST00000394320 HDGFP51858 240 aaKnown RBP19.09■□□□□ 0.65
PPARGC1B-203ENST00000394320 MYH16Q9H6N6 1097 aa19.09■□□□□ 0.65
PPARGC1B-203ENST00000394320 NPM2Q86SE8 214 aaKnown RBP19.08■□□□□ 0.65
PPARGC1B-203ENST00000394320 RAPGEF2Q9Y4G8 1499 aa19.08■□□□□ 0.64
PPARGC1B-203ENST00000394320 SETD5Q9C0A6 1442 aa19.08■□□□□ 0.64
PPARGC1B-203ENST00000394320 POGKQ9P215 609 aa19.03■□□□□ 0.64
PPARGC1B-203ENST00000394320 EFCAB2Q5VUJ9 269 aa19.03■□□□□ 0.64
PPARGC1B-203ENST00000394320 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
PPARGC1B-203ENST00000394320 NUDCQ9Y266 331 aa19.02■□□□□ 0.64
PPARGC1B-203ENST00000394320 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
PPARGC1B-203ENST00000394320 RSPH4AQ5TD94 716 aa18.99■□□□□ 0.63
PPARGC1B-203ENST00000394320 ANP32BQ92688 251 aaKnown RBP18.99■□□□□ 0.63
PPARGC1B-203ENST00000394320 TMF1P82094 1093 aa18.99■□□□□ 0.63
PPARGC1B-203ENST00000394320 ANKRD30AQ9BXX3 1397 aa18.97■□□□□ 0.63
PPARGC1B-203ENST00000394320 DCAF11Q8TEB1 546 aa18.94■□□□□ 0.62
PPARGC1B-203ENST00000394320 PNNQ9H307 717 aaKnown RBP18.94■□□□□ 0.62
PPARGC1B-203ENST00000394320 MAPK8IP3Q9UPT6 1336 aa18.94■□□□□ 0.62
PPARGC1B-203ENST00000394320 FANCD2Q9BXW9 1451 aa18.93■□□□□ 0.62
PPARGC1B-203ENST00000394320 EIF5BO60841 1220 aaKnown RBP18.93■□□□□ 0.62
PPARGC1B-203ENST00000394320 CCDC18Q5T9S5 1454 aa18.92■□□□□ 0.62
PPARGC1B-203ENST00000394320 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
PPARGC1B-203ENST00000394320 HAP1P54257 671 aaPredicted RBP18.9■□□□□ 0.62
PPARGC1B-203ENST00000394320 ZBTB7CA1YPR0 619 aa18.9■□□□□ 0.62
PPARGC1B-203ENST00000394320 PKD2Q13563 968 aa18.89■□□□□ 0.61
PPARGC1B-203ENST00000394320 CHMP4BQ9H444 224 aaKnown RBP18.88■□□□□ 0.61
PPARGC1B-203ENST00000394320 JPH4Q96JJ6 628 aa18.86■□□□□ 0.61
PPARGC1B-203ENST00000394320 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
PPARGC1B-203ENST00000394320 MS4A1P11836 297 aa18.85■□□□□ 0.61
PPARGC1B-203ENST00000394320 PPM1GO15355 546 aaPredicted RBP18.84■□□□□ 0.61
PPARGC1B-203ENST00000394320 FHOD3Q2V2M9 1422 aa18.84■□□□□ 0.61
PPARGC1B-203ENST00000394320 NUP155O75694 1391 aa18.84■□□□□ 0.61
PPARGC1B-203ENST00000394320 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.6
PPARGC1B-203ENST00000394320 GGT6Q6P531 493 aa18.83■□□□□ 0.6
PPARGC1B-203ENST00000394320 RAB3GAP2Q9H2M9 1393 aa18.82■□□□□ 0.6
PPARGC1B-203ENST00000394320 CCER2I3L3R5 266 aa18.82■□□□□ 0.6
PPARGC1B-203ENST00000394320 MPHOSPH9Q99550 1183 aa18.82■□□□□ 0.6
PPARGC1B-203ENST00000394320 NCAPD3P42695 1498 aa18.81■□□□□ 0.6
PPARGC1B-203ENST00000394320 DDRGK1Q96HY6 314 aa18.8■□□□□ 0.6
PPARGC1B-203ENST00000394320 FTSJ3Q8IY81 847 aaKnown RBP18.8■□□□□ 0.6
PPARGC1B-203ENST00000394320 A0A0G2JS52 829 aa18.79■□□□□ 0.6
PPARGC1B-203ENST00000394320 BECN1Q14457 450 aa18.79■□□□□ 0.6
PPARGC1B-203ENST00000394320 IRX6P78412 446 aaPredicted RBP18.77■□□□□ 0.59
PPARGC1B-203ENST00000394320 SPAG9O60271 1321 aaKnown RBP18.76■□□□□ 0.59
PPARGC1B-203ENST00000394320 SRPK2P78362 688 aaKnown RBP18.76■□□□□ 0.59
PPARGC1B-203ENST00000394320 MLECQ14165 292 aa18.76■□□□□ 0.59
PPARGC1B-203ENST00000394320 HSPA5P11021 654 aaKnown RBP18.75■□□□□ 0.59
PPARGC1B-203ENST00000394320 EIF3AQ14152 1382 aaKnown RBP18.74■□□□□ 0.59
PPARGC1B-203ENST00000394320 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
PPARGC1B-203ENST00000394320 PLEKHG5O94827 1062 aa18.72■□□□□ 0.59
PPARGC1B-203ENST00000394320 HDGFL2Q7Z4V5 671 aaPredicted RBP18.72■□□□□ 0.59
PPARGC1B-203ENST00000394320 MORC1Q86VD1 984 aa18.72■□□□□ 0.59
PPARGC1B-203ENST00000394320 CASC1Q6TDU7 716 aa18.72■□□□□ 0.59
PPARGC1B-203ENST00000394320 LMOD2Q6P5Q4 547 aa18.71■□□□□ 0.59
PPARGC1B-203ENST00000394320 PTPRGP23470 1445 aa18.71■□□□□ 0.59
PPARGC1B-203ENST00000394320 KTN1Q86UP2 1357 aaKnown RBP18.71■□□□□ 0.59
PPARGC1B-203ENST00000394320 U2SURPO15042 1029 aaKnown RBP18.71■□□□□ 0.59
PPARGC1B-203ENST00000394320 NEUROD2Q15784 382 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms