RNA–Protein interactions for RNA: ENST00000394070.6

STAMBP-202, Transcript of STAM binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STAMBP, Length 6,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-202ENST00000394070 BAZ1AQ9NRL2 1556 aaPredicted RBP11.51□□□□□ -0.57
STAMBP-202ENST00000394070 ARID4BQ4LE39 1312 aaPredicted RBP11.51□□□□□ -0.57
STAMBP-202ENST00000394070 SOGA1O94964 1423 aa11.51□□□□□ -0.57
STAMBP-202ENST00000394070 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
STAMBP-202ENST00000394070 C14orf37Q86TY3 774 aa11.48□□□□□ -0.57
STAMBP-202ENST00000394070 HNRNPUQ00839 825 aaKnown RBP eCLIP11.47□□□□□ -0.57
STAMBP-202ENST00000394070 MLECQ14165 292 aa11.46□□□□□ -0.58
STAMBP-202ENST00000394070 MTUS2Q5JR59 1369 aa11.45□□□□□ -0.58
STAMBP-202ENST00000394070 TSPY4P0CV99 314 aa11.44□□□□□ -0.58
STAMBP-202ENST00000394070 TSPY10P0CW01 314 aa11.44□□□□□ -0.58
STAMBP-202ENST00000394070 IRX6P78412 446 aaPredicted RBP11.44□□□□□ -0.58
STAMBP-202ENST00000394070 NPM2Q86SE8 214 aaKnown RBP11.44□□□□□ -0.58
STAMBP-202ENST00000394070 ERCC6Q03468 1493 aa11.43□□□□□ -0.58
STAMBP-202ENST00000394070 CCDC88BA6NC98 1476 aa11.43□□□□□ -0.58
STAMBP-202ENST00000394070 ABCC8Q09428 1581 aa11.41□□□□□ -0.58
STAMBP-202ENST00000394070 NEFMP07197 916 aa11.41□□□□□ -0.58
STAMBP-202ENST00000394070 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
STAMBP-202ENST00000394070 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
STAMBP-202ENST00000394070 TMC1Q8TDI8 760 aa11.37□□□□□ -0.59
STAMBP-202ENST00000394070 VPS8Q8N3P4 1428 aa11.37□□□□□ -0.59
STAMBP-202ENST00000394070 PPP1R15AO75807 674 aaPredicted RBP11.37□□□□□ -0.59
STAMBP-202ENST00000394070 SUPT16HQ9Y5B9 1047 aaKnown RBP11.37□□□□□ -0.59
STAMBP-202ENST00000394070 ANP32AP39687 249 aaKnown RBP11.37□□□□□ -0.59
STAMBP-202ENST00000394070 PLEKHD1A6NEE1 506 aa11.36□□□□□ -0.59
STAMBP-202ENST00000394070 KIF27Q86VH2 1401 aa11.36□□□□□ -0.59
STAMBP-202ENST00000394070 PPM1GO15355 546 aaPredicted RBP11.36□□□□□ -0.59
STAMBP-202ENST00000394070 LMOD2Q6P5Q4 547 aa11.35□□□□□ -0.59
STAMBP-202ENST00000394070 SIN3AQ96ST3 1273 aa11.33□□□□□ -0.6
STAMBP-202ENST00000394070 TNNT2P45379 298 aaPredicted RBP11.33□□□□□ -0.6
STAMBP-202ENST00000394070 WIZO95785 1651 aa11.33□□□□□ -0.6
STAMBP-202ENST00000394070 SOX12O15370 315 aa11.32□□□□□ -0.6
STAMBP-202ENST00000394070 CCNB3Q8WWL7 1395 aa11.32□□□□□ -0.6
STAMBP-202ENST00000394070 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
STAMBP-202ENST00000394070 CFDP1Q9UEE9 299 aaPredicted RBP11.32□□□□□ -0.6
STAMBP-202ENST00000394070 SAFB2Q14151 953 aaKnown RBP eCLIP11.31□□□□□ -0.6
STAMBP-202ENST00000394070 ANP32EQ9BTT0 268 aa11.3□□□□□ -0.6
STAMBP-202ENST00000394070 FOXD1Q16676 465 aa11.3□□□□□ -0.6
STAMBP-202ENST00000394070 ARXQ96QS3 562 aa11.3□□□□□ -0.6
STAMBP-202ENST00000394070 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
STAMBP-202ENST00000394070 EIF4G1Q04637 1599 aaKnown RBP11.29□□□□□ -0.6
STAMBP-202ENST00000394070 EIF4G2P78344 907 aaKnown RBP eCLIP11.28□□□□□ -0.6
STAMBP-202ENST00000394070 KANK4Q5T7N3 995 aaPredicted RBP11.28□□□□□ -0.6
STAMBP-202ENST00000394070 NEUROD2Q15784 382 aa11.26□□□□□ -0.61
STAMBP-202ENST00000394070 CCDC136Q96JN2 1154 aa11.26□□□□□ -0.61
STAMBP-202ENST00000394070 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
STAMBP-202ENST00000394070 TDRD9Q8NDG6 1382 aaKnown RBP11.25□□□□□ -0.61
STAMBP-202ENST00000394070 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
STAMBP-202ENST00000394070 NUTM2DQ5VT03 806 aaPredicted RBP11.23□□□□□ -0.61
STAMBP-202ENST00000394070 GGT6Q6P531 493 aa11.23□□□□□ -0.61
STAMBP-202ENST00000394070 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
STAMBP-202ENST00000394070 WDR43Q15061 677 aaKnown RBP eCLIP11.21□□□□□ -0.61
STAMBP-202ENST00000394070 RUSC2Q8N2Y8 1516 aa11.21□□□□□ -0.61
STAMBP-202ENST00000394070 PHF23Q9BUL5 403 aaPredicted RBP11.21□□□□□ -0.62
STAMBP-202ENST00000394070 SETD5Q9C0A6 1442 aa11.2□□□□□ -0.62
STAMBP-202ENST00000394070 NBR1Q14596 966 aa11.2□□□□□ -0.62
STAMBP-202ENST00000394070 LAS1LQ9Y4W2 734 aaKnown RBP11.19□□□□□ -0.62
STAMBP-202ENST00000394070 FHAD1B1AJZ9 1412 aa11.19□□□□□ -0.62
STAMBP-202ENST00000394070 CUX2O14529 1486 aa11.19□□□□□ -0.62
STAMBP-202ENST00000394070 STK26Q9P289 416 aa11.19□□□□□ -0.62
STAMBP-202ENST00000394070 CCER2I3L3R5 266 aa11.18□□□□□ -0.62
STAMBP-202ENST00000394070 CARMIL1Q5VZK9 1371 aa11.18□□□□□ -0.62
STAMBP-202ENST00000394070 RAB3GAP2Q9H2M9 1393 aa11.18□□□□□ -0.62
STAMBP-202ENST00000394070 CC2D1BQ5T0F9 858 aaKnown RBP11.17□□□□□ -0.62
STAMBP-202ENST00000394070 RAPGEF2Q9Y4G8 1499 aa11.17□□□□□ -0.62
STAMBP-202ENST00000394070 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
STAMBP-202ENST00000394070 CARD11Q9BXL7 1154 aa11.16□□□□□ -0.62
STAMBP-202ENST00000394070 TAOK2Q9UL54 1235 aa11.15□□□□□ -0.62
STAMBP-202ENST00000394070 POGKQ9P215 609 aa11.14□□□□□ -0.63
STAMBP-202ENST00000394070 PPP4R2Q9NY27 417 aa11.14□□□□□ -0.63
STAMBP-202ENST00000394070 TPRNQ4KMQ1 711 aa11.13□□□□□ -0.63
STAMBP-202ENST00000394070 DCAF11Q8TEB1 546 aa11.13□□□□□ -0.63
STAMBP-202ENST00000394070 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
STAMBP-202ENST00000394070 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
STAMBP-202ENST00000394070 SMARCA4P51532 1647 aa11.13□□□□□ -0.63
STAMBP-202ENST00000394070 SMARCA2P51531 1590 aa11.12□□□□□ -0.63
STAMBP-202ENST00000394070 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
STAMBP-202ENST00000394070 CYB5RLQ6IPT4 315 aa11.11□□□□□ -0.63
STAMBP-202ENST00000394070 ARHGAP35Q9NRY4 1499 aa11.1□□□□□ -0.63
STAMBP-202ENST00000394070 HSP90AA1P07900 732 aaKnown RBP11.1□□□□□ -0.63
STAMBP-202ENST00000394070 HNRNPMP52272 730 aaKnown RBP eCLIP11.08□□□□□ -0.64
STAMBP-202ENST00000394070 U2SURPO15042 1029 aaKnown RBP11.07□□□□□ -0.64
STAMBP-202ENST00000394070 HSPA5P11021 654 aaKnown RBP11.07□□□□□ -0.64
STAMBP-202ENST00000394070 B4GALNT3Q6L9W6 998 aa11.06□□□□□ -0.64
STAMBP-202ENST00000394070 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.06□□□□□ -0.64
STAMBP-202ENST00000394070 KNSTRNQ9Y448 316 aa11.05□□□□□ -0.64
STAMBP-202ENST00000394070 ATAD2BQ9ULI0 1458 aa11.04□□□□□ -0.64
STAMBP-202ENST00000394070 PAK3O75914 559 aaPredicted RBP11.04□□□□□ -0.64
STAMBP-202ENST00000394070 SRPK2P78362 688 aaKnown RBP11.04□□□□□ -0.64
STAMBP-202ENST00000394070 FRAT1Q92837 279 aaPredicted RBP11.02□□□□□ -0.65
STAMBP-202ENST00000394070 PKD2Q13563 968 aa11.02□□□□□ -0.65
STAMBP-202ENST00000394070 NOP58Q9Y2X3 529 aaKnown RBP11.02□□□□□ -0.65
STAMBP-202ENST00000394070 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
STAMBP-202ENST00000394070 UPF2Q9HAU5 1272 aaKnown RBP11.01□□□□□ -0.65
STAMBP-202ENST00000394070 ERICH6BQ5W0A0 696 aa11□□□□□ -0.65
STAMBP-202ENST00000394070 KIF3BO15066 747 aa10.99□□□□□ -0.65
STAMBP-202ENST00000394070 KIF21BO75037 1637 aa10.99□□□□□ -0.65
STAMBP-202ENST00000394070 FMN1Q68DA7 1419 aa10.99□□□□□ -0.65
STAMBP-202ENST00000394070 EIF5BO60841 1220 aaKnown RBP10.98□□□□□ -0.65
STAMBP-202ENST00000394070 DDRGK1Q96HY6 314 aa10.98□□□□□ -0.65
STAMBP-202ENST00000394070 NPHP1O15259 732 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms