RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 PCDH10Q9P2E7 1040 aa11.19□□□□□ -0.62
NPM1-203ENST00000393820 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
NPM1-203ENST00000393820 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
NPM1-203ENST00000393820 MAMSTRQ6ZN01 415 aa11.09□□□□□ -0.63
NPM1-203ENST00000393820 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
NPM1-203ENST00000393820 C7P10643 843 aa11.08□□□□□ -0.64
NPM1-203ENST00000393820 SLC39A7Q92504 469 aa11.08□□□□□ -0.64
NPM1-203ENST00000393820 ASTLQ6HA08 431 aaPredicted RBP11.07□□□□□ -0.64
NPM1-203ENST00000393820 ATMINO43313 823 aaPredicted RBP11.03□□□□□ -0.64
NPM1-203ENST00000393820 PROM2Q8N271 834 aa11.02□□□□□ -0.65
NPM1-203ENST00000393820 MS4A3Q96HJ5 214 aa11.02□□□□□ -0.65
NPM1-203ENST00000393820 POTEJP0CG39 1038 aa11.01□□□□□ -0.65
NPM1-203ENST00000393820 MNX1P50219 401 aaPredicted RBP11.01□□□□□ -0.65
NPM1-203ENST00000393820 SCUBE2Q9NQ36 999 aa10.98□□□□□ -0.65
NPM1-203ENST00000393820 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
NPM1-203ENST00000393820 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
NPM1-203ENST00000393820 ATN1P54259 1190 aaPredicted RBP10.89□□□□□ -0.67
NPM1-203ENST00000393820 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
NPM1-203ENST00000393820 CCDC180Q9P1Z9 1646 aa10.85□□□□□ -0.67
NPM1-203ENST00000393820 FBXO3Q9UK99 471 aa10.85□□□□□ -0.67
NPM1-203ENST00000393820 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
NPM1-203ENST00000393820 ABCC9O60706 1549 aa10.82□□□□□ -0.68
NPM1-203ENST00000393820 KIF12Q96FN5 646 aa10.82□□□□□ -0.68
NPM1-203ENST00000393820 BMP2KQ9NSY1 1161 aaPredicted RBP10.8□□□□□ -0.68
NPM1-203ENST00000393820 POTEFA5A3E0 1075 aa10.79□□□□□ -0.68
NPM1-203ENST00000393820 VASPP50552 380 aaPredicted RBP10.77□□□□□ -0.68
NPM1-203ENST00000393820 TIE1P35590 1138 aa10.77□□□□□ -0.69
NPM1-203ENST00000393820 CDAN1Q8IWY9 1227 aa10.76□□□□□ -0.69
NPM1-203ENST00000393820 SEC24BO95487 1268 aa10.74□□□□□ -0.69
NPM1-203ENST00000393820 TRPC6Q9Y210 931 aa10.73□□□□□ -0.69
NPM1-203ENST00000393820 MAP3K13O43283 966 aa10.71□□□□□ -0.69
NPM1-203ENST00000393820 IFNLR1Q8IU57 520 aaPredicted RBP10.69□□□□□ -0.7
NPM1-203ENST00000393820 COLQQ9Y215 455 aaPredicted RBP10.69□□□□□ -0.7
NPM1-203ENST00000393820 TTLL13PA6NNM8 815 aa10.67□□□□□ -0.7
NPM1-203ENST00000393820 PLEKHG5O94827 1062 aa10.67□□□□□ -0.7
NPM1-203ENST00000393820 IER5LQ5T953 404 aa10.66□□□□□ -0.7
NPM1-203ENST00000393820 MIER1Q8N108 512 aa10.65□□□□□ -0.7
NPM1-203ENST00000393820 PLCD3Q8N3E9 789 aa10.65□□□□□ -0.71
NPM1-203ENST00000393820 RASEFQ8IZ41 740 aa10.61□□□□□ -0.71
NPM1-203ENST00000393820 SLAIN1Q8ND83 568 aa10.61□□□□□ -0.71
NPM1-203ENST00000393820 ST18O60284 1047 aa10.6□□□□□ -0.71
NPM1-203ENST00000393820 TRIM35Q9UPQ4 493 aa10.6□□□□□ -0.71
NPM1-203ENST00000393820 SGIP1Q9BQI5 828 aa10.6□□□□□ -0.71
NPM1-203ENST00000393820 KLHL34Q8N239 644 aa10.59□□□□□ -0.71
NPM1-203ENST00000393820 PCDHB13Q9Y5F0 798 aa10.56□□□□□ -0.72
NPM1-203ENST00000393820 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
NPM1-203ENST00000393820 MMRN1Q13201 1228 aa10.52□□□□□ -0.72
NPM1-203ENST00000393820 PLCG2P16885 1265 aa10.52□□□□□ -0.73
NPM1-203ENST00000393820 TMEM121BQ9BXQ6 578 aaPredicted RBP10.51□□□□□ -0.73
NPM1-203ENST00000393820 SPNS2Q8IVW8 549 aa10.5□□□□□ -0.73
NPM1-203ENST00000393820 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
NPM1-203ENST00000393820 SNPHO15079 494 aa10.47□□□□□ -0.73
NPM1-203ENST00000393820 SPOCK2Q92563 424 aa10.47□□□□□ -0.73
NPM1-203ENST00000393820 IFNL1Q8IU54 200 aa10.46□□□□□ -0.74
NPM1-203ENST00000393820 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
NPM1-203ENST00000393820 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
NPM1-203ENST00000393820 OCEL1Q9H607 264 aa10.4□□□□□ -0.74
NPM1-203ENST00000393820 NUBP1P53384 320 aa10.39□□□□□ -0.75
NPM1-203ENST00000393820 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
NPM1-203ENST00000393820 PKD2Q13563 968 aa10.38□□□□□ -0.75
NPM1-203ENST00000393820 FAM212AQ96EL1 285 aa10.38□□□□□ -0.75
NPM1-203ENST00000393820 MARVELD3Q96A59 401 aa10.37□□□□□ -0.75
NPM1-203ENST00000393820 RB1CC1Q8TDY2 1594 aa10.36□□□□□ -0.75
NPM1-203ENST00000393820 HAP1P54257 671 aaPredicted RBP10.35□□□□□ -0.75
NPM1-203ENST00000393820 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
NPM1-203ENST00000393820 DCAF8L2P0C7V8 631 aa10.31□□□□□ -0.76
NPM1-203ENST00000393820 NACADO15069 1562 aa10.3□□□□□ -0.76
NPM1-203ENST00000393820 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
NPM1-203ENST00000393820 EMP3P54852 163 aa10.28□□□□□ -0.76
NPM1-203ENST00000393820 BCANQ96GW7 911 aa10.27□□□□□ -0.76
NPM1-203ENST00000393820 ECM2O94769 699 aaPredicted RBP10.26□□□□□ -0.77
NPM1-203ENST00000393820 C3orf67Q6ZVT6 689 aa10.25□□□□□ -0.77
NPM1-203ENST00000393820 VSIG10Q8N0Z9 540 aa10.23□□□□□ -0.77
NPM1-203ENST00000393820 L3MBTL3Q96JM7 780 aaPredicted RBP10.22□□□□□ -0.77
NPM1-203ENST00000393820 GSE1Q14687 1217 aa10.21□□□□□ -0.78
NPM1-203ENST00000393820 HS3ST6Q96QI5 342 aa10.21□□□□□ -0.78
NPM1-203ENST00000393820 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.78
NPM1-203ENST00000393820 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.78
NPM1-203ENST00000393820 RGL2O15211 777 aa10.2□□□□□ -0.78
NPM1-203ENST00000393820 PYGBP11216 843 aa10.2□□□□□ -0.78
NPM1-203ENST00000393820 MYO15BQ96JP2 1530 aa10.19□□□□□ -0.78
NPM1-203ENST00000393820 FAM205CA6NFA0 338 aa10.19□□□□□ -0.78
NPM1-203ENST00000393820 PCDHB8Q9UN66 801 aa10.19□□□□□ -0.78
NPM1-203ENST00000393820 PDCD7Q8N8D1 485 aaKnown RBP10.18□□□□□ -0.78
NPM1-203ENST00000393820 PRKCSHP14314 528 aaPredicted RBP10.18□□□□□ -0.78
NPM1-203ENST00000393820 TAOK2Q9UL54 1235 aa10.17□□□□□ -0.78
NPM1-203ENST00000393820 POTEB3A0JP26 581 aa10.16□□□□□ -0.78
NPM1-203ENST00000393820 GOLGA2Q08379 1002 aa10.16□□□□□ -0.78
NPM1-203ENST00000393820 POTEBQ6S5H4 581 aa10.16□□□□□ -0.78
NPM1-203ENST00000393820 MKRN3Q13064 507 aaKnown RBP10.15□□□□□ -0.78
NPM1-203ENST00000393820 RNF25Q96BH1 459 aaPredicted RBP10.14□□□□□ -0.79
NPM1-203ENST00000393820 BBXQ8WY36 941 aaPredicted RBP10.11□□□□□ -0.79
NPM1-203ENST00000393820 KDM2AQ9Y2K7 1162 aa10.1□□□□□ -0.79
NPM1-203ENST00000393820 ZNF467Q7Z7K2 595 aaPredicted RBP10.09□□□□□ -0.79
NPM1-203ENST00000393820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.09□□□□□ -0.792e-17■■■□□ 17.2
NPM1-203ENST00000393820 TRIM41Q8WV44 630 aa10.09□□□□□ -0.79
NPM1-203ENST00000393820 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.09□□□□□ -0.79
NPM1-203ENST00000393820 CHRM1P11229 460 aaPredicted RBP10.05□□□□□ -0.8
NPM1-203ENST00000393820 PAXIP1Q6ZW49 1069 aaPredicted RBP10.04□□□□□ -0.8
NPM1-203ENST00000393820 RIOK3O14730 519 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms