RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 ZNF608Q9ULD9 1512 aaPredicted RBP31.17■■■□□ 2.58
ME3-202ENST00000393324 GRIN2BQ13224 1484 aa31.15■■■□□ 2.58
ME3-202ENST00000393324 FHAD1B1AJZ9 1412 aa31.12■■■□□ 2.57
ME3-202ENST00000393324 ADAMTS12P58397 1594 aa31.08■■■□□ 2.57
ME3-202ENST00000393324 EFCAB5A4FU69 1503 aa31.07■■■□□ 2.56
ME3-202ENST00000393324 P3H3Q8IVL6 736 aa31.05■■■□□ 2.56
ME3-202ENST00000393324 EIF4G3O43432 1585 aaKnown RBP31.03■■■□□ 2.56
ME3-202ENST00000393324 KANK4Q5T7N3 995 aaPredicted RBP30.99■■■□□ 2.55
ME3-202ENST00000393324 FHOD3Q2V2M9 1422 aa30.99■■■□□ 2.55
ME3-202ENST00000393324 SNAPC4Q5SXM2 1469 aa30.93■■■□□ 2.54
ME3-202ENST00000393324 SAMD9Q5K651 1589 aa30.91■■■□□ 2.54
ME3-202ENST00000393324 PCF11O94913 1555 aaKnown RBP30.89■■■□□ 2.54
ME3-202ENST00000393324 MAP3K1Q13233 1512 aa30.89■■■□□ 2.54
ME3-202ENST00000393324 TIAM1Q13009 1591 aa30.87■■■□□ 2.53
ME3-202ENST00000393324 IQGAP2Q13576 1575 aa30.84■■■□□ 2.53
ME3-202ENST00000393324 FMN1Q68DA7 1419 aa30.83■■■□□ 2.53
ME3-202ENST00000393324 ZEB1P37275 1124 aaPredicted RBP30.83■■■□□ 2.53
ME3-202ENST00000393324 MAGI1Q96QZ7 1491 aaPredicted RBP30.82■■■□□ 2.53
ME3-202ENST00000393324 FYCO1Q9BQS8 1478 aa30.81■■■□□ 2.52
ME3-202ENST00000393324 CASKIN1Q8WXD9 1431 aa30.81■■■□□ 2.52
ME3-202ENST00000393324 ATP1B4Q9UN42 357 aaPredicted RBP30.79■■■□□ 2.52
ME3-202ENST00000393324 GRIN2AQ12879 1464 aa30.79■■■□□ 2.52
ME3-202ENST00000393324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.77■■■□□ 2.52
ME3-202ENST00000393324 CFAP43Q8NDM7 1665 aa30.76■■■□□ 2.51
ME3-202ENST00000393324 LRRC9Q6ZRR7 1453 aa30.74■■■□□ 2.51
ME3-202ENST00000393324 HNRNPUL2Q1KMD3 747 aaKnown RBP30.73■■■□□ 2.51
ME3-202ENST00000393324 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
ME3-202ENST00000393324 CHMP7Q8WUX9 453 aaPredicted RBP30.71■■■□□ 2.51
ME3-202ENST00000393324 KIAA0586Q9BVV6 1533 aa30.71■■■□□ 2.51
ME3-202ENST00000393324 CCER1Q8TC90 406 aaPredicted RBP30.69■■■□□ 2.5
ME3-202ENST00000393324 UGGT2Q9NYU1 1516 aa30.67■■■□□ 2.5
ME3-202ENST00000393324 RRBP1Q9P2E9 1410 aaKnown RBP30.67■■■□□ 2.5
ME3-202ENST00000393324 FBLN2P98095 1184 aa30.64■■■□□ 2.5
ME3-202ENST00000393324 CEP170Q5SW79 1584 aa30.59■■■□□ 2.49
ME3-202ENST00000393324 CCNB3Q8WWL7 1395 aa30.57■■■□□ 2.49
ME3-202ENST00000393324 LRRIQ1Q96JM4 1722 aa30.56■■■□□ 2.48
ME3-202ENST00000393324 DISP1Q96F81 1524 aa30.52■■■□□ 2.48
ME3-202ENST00000393324 NUP160Q12769 1436 aa30.52■■■□□ 2.48
ME3-202ENST00000393324 KIAA0556O60303 1618 aa30.52■■■□□ 2.48
ME3-202ENST00000393324 PHLDB1Q86UU1 1377 aa30.51■■■□□ 2.47
ME3-202ENST00000393324 MTUS2Q5JR59 1369 aa30.45■■■□□ 2.47
ME3-202ENST00000393324 HECW1Q76N89 1606 aa30.45■■■□□ 2.47
ME3-202ENST00000393324 CCDC18Q5T9S5 1454 aa30.43■■■□□ 2.46
ME3-202ENST00000393324 JPH4Q96JJ6 628 aa30.39■■■□□ 2.46
ME3-202ENST00000393324 EPRSP07814 1512 aaKnown RBP30.37■■■□□ 2.45
ME3-202ENST00000393324 ITGAEP38570 1179 aa30.34■■■□□ 2.45
ME3-202ENST00000393324 EHBP1L1Q8N3D4 1523 aa30.34■■■□□ 2.45
ME3-202ENST00000393324 CARMIL2Q6F5E8 1435 aa30.32■■■□□ 2.44
ME3-202ENST00000393324 CHD1O14646 1710 aa30.31■■■□□ 2.44
ME3-202ENST00000393324 FAM50AQ14320 339 aaKnown RBP30.3■■■□□ 2.44
ME3-202ENST00000393324 SUPT6HQ7KZ85 1726 aaKnown RBP30.3■■■□□ 2.44
ME3-202ENST00000393324 MAGI3Q5TCQ9 1506 aa30.3■■■□□ 2.44
ME3-202ENST00000393324 CDK13Q14004 1512 aaKnown RBP30.29■■■□□ 2.44
ME3-202ENST00000393324 NCOA2Q15596 1464 aa30.28■■■□□ 2.44
ME3-202ENST00000393324 RAPGEF6Q8TEU7 1601 aa30.28■■■□□ 2.44
ME3-202ENST00000393324 ARID3CA6NKF2 412 aa30.25■■■□□ 2.43
ME3-202ENST00000393324 FGD6Q6ZV73 1430 aa30.24■■■□□ 2.43
ME3-202ENST00000393324 NUP153P49790 1475 aaKnown RBP30.23■■■□□ 2.43
ME3-202ENST00000393324 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.22■■■□□ 2.43
ME3-202ENST00000393324 MYOM3Q5VTT5 1437 aa30.19■■■□□ 2.42
ME3-202ENST00000393324 ARHGEF11O15085 1522 aa30.19■■■□□ 2.42
ME3-202ENST00000393324 PLB1Q6P1J6 1458 aa30.17■■■□□ 2.42
ME3-202ENST00000393324 PRG4Q92954 1404 aaPredicted RBP30.13■■■□□ 2.41
ME3-202ENST00000393324 DHX57Q6P158 1386 aaKnown RBP30.1■■■□□ 2.41
ME3-202ENST00000393324 CDK11AQ9UQ88 783 aaPredicted RBP30.08■■■□□ 2.41
ME3-202ENST00000393324 RAB3GAP2Q9H2M9 1393 aa30.07■■■□□ 2.4
ME3-202ENST00000393324 SETD5Q9C0A6 1442 aa30.07■■■□□ 2.4
ME3-202ENST00000393324 PTPN23Q9H3S7 1636 aa30.04■■■□□ 2.4
ME3-202ENST00000393324 ABCA8O94911 1581 aa30.04■■■□□ 2.4
ME3-202ENST00000393324 SHROOM2Q13796 1616 aa30.03■■■□□ 2.4
ME3-202ENST00000393324 CLSPNQ9HAW4 1339 aa30.02■■■□□ 2.4
ME3-202ENST00000393324 PTPRGP23470 1445 aa29.99■■■□□ 2.39
ME3-202ENST00000393324 MIA2Q96PC5 1412 aa29.96■■■□□ 2.39
ME3-202ENST00000393324 TCOF1Q13428 1488 aaKnown RBP29.96■■■□□ 2.39
ME3-202ENST00000393324 TROQ12816 1431 aaPredicted RBP29.96■■■□□ 2.39
ME3-202ENST00000393324 PTPRKQ15262 1439 aa29.94■■■□□ 2.38
ME3-202ENST00000393324 CLASP1Q7Z460 1538 aa29.91■■■□□ 2.38
ME3-202ENST00000393324 ATP10BO94823 1461 aa29.9■■■□□ 2.38
ME3-202ENST00000393324 ERCC6L2Q5T890 1561 aa29.87■■■□□ 2.37
ME3-202ENST00000393324 ADCY10Q96PN6 1610 aa29.85■■■□□ 2.37
ME3-202ENST00000393324 HFM1A2PYH4 1435 aa29.84■■■□□ 2.37
ME3-202ENST00000393324 PLEKHD1A6NEE1 506 aa29.84■■■□□ 2.37
ME3-202ENST00000393324 KIF14Q15058 1648 aa29.83■■■□□ 2.37
ME3-202ENST00000393324 UACAQ9BZF9 1416 aa29.81■■■□□ 2.36
ME3-202ENST00000393324 NAIPQ13075 1403 aa29.77■■■□□ 2.36
ME3-202ENST00000393324 ITSN2Q9NZM3 1697 aa29.77■■■□□ 2.36
ME3-202ENST00000393324 MAPKBP1O60336 1514 aa29.76■■■□□ 2.35
ME3-202ENST00000393324 GPATCH8Q9UKJ3 1502 aaKnown RBP29.75■■■□□ 2.35
ME3-202ENST00000393324 CHIC2Q9UKJ5 165 aa29.73■■■□□ 2.35
ME3-202ENST00000393324 ZNF644Q9H582 1327 aaPredicted RBP29.73■■■□□ 2.35
ME3-202ENST00000393324 CFDP1Q9UEE9 299 aaPredicted RBP29.72■■■□□ 2.35
ME3-202ENST00000393324 ABCC2Q92887 1545 aa29.69■■■□□ 2.34
ME3-202ENST00000393324 RRP7BPQ9NSQ0 103 aa29.69■■■□□ 2.34
ME3-202ENST00000393324 DNMT1P26358 1616 aaKnown RBP29.68■■■□□ 2.34
ME3-202ENST00000393324 DAPK1P53355 1430 aa29.68■■■□□ 2.34
ME3-202ENST00000393324 AKNAQ7Z591 1439 aa29.67■■■□□ 2.34
ME3-202ENST00000393324 ABCC10Q5T3U5 1492 aa29.67■■■□□ 2.34
ME3-202ENST00000393324 GCC2Q8IWJ2 1684 aa29.66■■■□□ 2.34
ME3-202ENST00000393324 CAMSAP2Q08AD1 1489 aa29.66■■■□□ 2.34
ME3-202ENST00000393324 CDC42BPAQ5VT25 1732 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms