RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 AQRO60306 1485 aaKnown RBP eCLIP11.53□□□□□ -0.56
ATXN3-203ENST00000393287 TSPY4P0CV99 314 aa11.52□□□□□ -0.57
ATXN3-203ENST00000393287 TSPY10P0CW01 314 aa11.52□□□□□ -0.57
ATXN3-203ENST00000393287 IGF1RP08069 1367 aa11.51□□□□□ -0.57
ATXN3-203ENST00000393287 CEP162Q5TB80 1403 aa11.48□□□□□ -0.57
ATXN3-203ENST00000393287 POLA1P09884 1462 aaPredicted RBP11.48□□□□□ -0.57
ATXN3-203ENST00000393287 DNMBPQ6XZF7 1577 aa11.46□□□□□ -0.57
ATXN3-203ENST00000393287 NEFLP07196 543 aa11.46□□□□□ -0.57
ATXN3-203ENST00000393287 CYB5RLQ6IPT4 315 aa11.46□□□□□ -0.57
ATXN3-203ENST00000393287 PTPRGP23470 1445 aa11.45□□□□□ -0.58
ATXN3-203ENST00000393287 FMN1Q68DA7 1419 aa11.44□□□□□ -0.58
ATXN3-203ENST00000393287 CFDP1Q9UEE9 299 aaPredicted RBP11.44□□□□□ -0.58
ATXN3-203ENST00000393287 POLR3GLQ9BT43 218 aa11.4□□□□□ -0.58
ATXN3-203ENST00000393287 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
ATXN3-203ENST00000393287 BCANQ96GW7 911 aa11.38□□□□□ -0.59
ATXN3-203ENST00000393287 CUX1P39880 1505 aa11.38□□□□□ -0.59
ATXN3-203ENST00000393287 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
ATXN3-203ENST00000393287 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
ATXN3-203ENST00000393287 URB2Q14146 1524 aaKnown RBP11.37□□□□□ -0.59
ATXN3-203ENST00000393287 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
ATXN3-203ENST00000393287 HRCP23327 699 aa11.36□□□□□ -0.59
ATXN3-203ENST00000393287 EFCAB2Q5VUJ9 269 aa11.36□□□□□ -0.59
ATXN3-203ENST00000393287 SNAPC4Q5SXM2 1469 aa11.34□□□□□ -0.59
ATXN3-203ENST00000393287 NEUROD1Q13562 356 aa11.34□□□□□ -0.59
ATXN3-203ENST00000393287 TOP2BQ02880 1626 aa11.34□□□□□ -0.59
ATXN3-203ENST00000393287 ARID4BQ4LE39 1312 aaPredicted RBP11.33□□□□□ -0.6
ATXN3-203ENST00000393287 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
ATXN3-203ENST00000393287 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
ATXN3-203ENST00000393287 PRG4Q92954 1404 aaPredicted RBP11.31□□□□□ -0.6
ATXN3-203ENST00000393287 RUSC2Q8N2Y8 1516 aa11.31□□□□□ -0.6
ATXN3-203ENST00000393287 TONSLQ96HA7 1378 aa11.31□□□□□ -0.6
ATXN3-203ENST00000393287 SYNJ1O43426 1573 aa11.3□□□□□ -0.6
ATXN3-203ENST00000393287 SYNJ2O15056 1496 aa11.3□□□□□ -0.6
ATXN3-203ENST00000393287 FHOD3Q2V2M9 1422 aa11.3□□□□□ -0.6
ATXN3-203ENST00000393287 VPS8Q8N3P4 1428 aa11.3□□□□□ -0.6
ATXN3-203ENST00000393287 KANK1Q14678 1352 aa11.28□□□□□ -0.6
ATXN3-203ENST00000393287 NEFMP07197 916 aa11.27□□□□□ -0.6
ATXN3-203ENST00000393287 KIAA0586Q9BVV6 1533 aa11.27□□□□□ -0.6
ATXN3-203ENST00000393287 ZNF326Q5BKZ1 582 aaKnown RBP11.27□□□□□ -0.61
ATXN3-203ENST00000393287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.26□□□□□ -0.61
ATXN3-203ENST00000393287 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
ATXN3-203ENST00000393287 PLPPR3Q6T4P5 718 aa11.25□□□□□ -0.61
ATXN3-203ENST00000393287 RSPH4AQ5TD94 716 aa11.25□□□□□ -0.61
ATXN3-203ENST00000393287 ARHGAP35Q9NRY4 1499 aa11.25□□□□□ -0.61
ATXN3-203ENST00000393287 PRXQ9BXM0 1461 aa11.23□□□□□ -0.61
ATXN3-203ENST00000393287 FAM69CQ0P6D2 419 aa11.23□□□□□ -0.61
ATXN3-203ENST00000393287 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
ATXN3-203ENST00000393287 CCDC18Q5T9S5 1454 aa11.23□□□□□ -0.61
ATXN3-203ENST00000393287 ANP32CO43423 234 aa11.23□□□□□ -0.61
ATXN3-203ENST00000393287 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
ATXN3-203ENST00000393287 GRIN2AQ12879 1464 aa11.21□□□□□ -0.61
ATXN3-203ENST00000393287 HDGFP51858 240 aaKnown RBP11.21□□□□□ -0.61
ATXN3-203ENST00000393287 WDR62O43379 1518 aa11.2□□□□□ -0.62
ATXN3-203ENST00000393287 RRP7BPQ9NSQ0 103 aa11.19□□□□□ -0.62
ATXN3-203ENST00000393287 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
ATXN3-203ENST00000393287 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-203ENST00000393287 SPAG9O60271 1321 aaKnown RBP11.14□□□□□ -0.63
ATXN3-203ENST00000393287 ERICH6Q7L0X2 663 aa11.14□□□□□ -0.63
ATXN3-203ENST00000393287 UACAQ9BZF9 1416 aa11.14□□□□□ -0.63
ATXN3-203ENST00000393287 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
ATXN3-203ENST00000393287 CDCA8Q53HL2 280 aa11.13□□□□□ -0.63
ATXN3-203ENST00000393287 CLSPNQ9HAW4 1339 aa11.13□□□□□ -0.63
ATXN3-203ENST00000393287 MLECQ14165 292 aa11.12□□□□□ -0.63
ATXN3-203ENST00000393287 KIF21BO75037 1637 aa11.12□□□□□ -0.63
ATXN3-203ENST00000393287 KANK4Q5T7N3 995 aaPredicted RBP11.12□□□□□ -0.63
ATXN3-203ENST00000393287 EFCAB5A4FU69 1503 aa11.12□□□□□ -0.63
ATXN3-203ENST00000393287 YTHDC1Q96MU7 727 aaKnown RBP11.12□□□□□ -0.63
ATXN3-203ENST00000393287 DIEXFQ68CQ4 756 aaKnown RBP11.11□□□□□ -0.63
ATXN3-203ENST00000393287 ANKRD30AQ9BXX3 1397 aa11.11□□□□□ -0.63
ATXN3-203ENST00000393287 GGT6Q6P531 493 aa11.1□□□□□ -0.63
ATXN3-203ENST00000393287 CUL7Q14999 1698 aa11.09□□□□□ -0.63
ATXN3-203ENST00000393287 CASKIN1Q8WXD9 1431 aa11.08□□□□□ -0.63
ATXN3-203ENST00000393287 BIVM-ERCC5R4GMW8 1640 aa11.08□□□□□ -0.64
ATXN3-203ENST00000393287 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
ATXN3-203ENST00000393287 HNRNPMP52272 730 aaKnown RBP eCLIP11.07□□□□□ -0.64
ATXN3-203ENST00000393287 IQGAP2Q13576 1575 aa11.06□□□□□ -0.64
ATXN3-203ENST00000393287 KIF3BO15066 747 aa11.05□□□□□ -0.64
ATXN3-203ENST00000393287 ZBTB47Q9UFB7 747 aaPredicted RBP11.02□□□□□ -0.64
ATXN3-203ENST00000393287 SETD5Q9C0A6 1442 aa11.02□□□□□ -0.64
ATXN3-203ENST00000393287 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
ATXN3-203ENST00000393287 NUP160Q12769 1436 aa11.01□□□□□ -0.65
ATXN3-203ENST00000393287 WDR97A6NE52 1622 aa11.01□□□□□ -0.65
ATXN3-203ENST00000393287 TROQ12816 1431 aaPredicted RBP11.01□□□□□ -0.65
ATXN3-203ENST00000393287 DAXXQ9UER7 740 aaPredicted RBP11□□□□□ -0.65
ATXN3-203ENST00000393287 EIF4G2P78344 907 aaKnown RBP eCLIP11□□□□□ -0.65
ATXN3-203ENST00000393287 WASHC2CQ9Y4E1 1318 aa11□□□□□ -0.65
ATXN3-203ENST00000393287 FYCO1Q9BQS8 1478 aa11□□□□□ -0.65
ATXN3-203ENST00000393287 CNGB1Q14028 1251 aaPredicted RBP10.99□□□□□ -0.65
ATXN3-203ENST00000393287 PLEKHH2Q8IVE3 1493 aa10.98□□□□□ -0.65
ATXN3-203ENST00000393287 MYOM3Q5VTT5 1437 aa10.98□□□□□ -0.65
ATXN3-203ENST00000393287 HECW1Q76N89 1606 aa10.98□□□□□ -0.65
ATXN3-203ENST00000393287 PLB1Q6P1J6 1458 aa10.98□□□□□ -0.65
ATXN3-203ENST00000393287 EIF4G3O43432 1585 aaKnown RBP10.98□□□□□ -0.65
ATXN3-203ENST00000393287 ARAP1Q96P48 1450 aa10.98□□□□□ -0.65
ATXN3-203ENST00000393287 C14orf37Q86TY3 774 aa10.97□□□□□ -0.65
ATXN3-203ENST00000393287 NUP155O75694 1391 aa10.96□□□□□ -0.65
ATXN3-203ENST00000393287 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.66
ATXN3-203ENST00000393287 ADAMTS12P58397 1594 aa10.96□□□□□ -0.66
ATXN3-203ENST00000393287 CANXP27824 592 aaKnown RBP10.95□□□□□ -0.66
ATXN3-203ENST00000393287 RGL3Q3MIN7 710 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms